printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild cran-tkrplot-r31 2>&1 The package 'cran-tkrplot-r31' will be built without being installed. Reading build dependency for cran-tkrplot-r31-0.0-23-2... Reading dependency for cran-tkrplot-r31-0.0-23-2... Reading build conflict for cran-tkrplot-r31-0.0-23-2... The package 'r-base31-dev' will be installed. Reading dependency for r-base31-dev-3.1.1-2... Reading runtime dependency for r-base31-dev-3.1.1-2... The package 'tcltk-dev' will be installed. Reading dependency for tcltk-dev-8.6.1-104... Reading runtime dependency for tcltk-dev-8.6.1-104... The package 'xvfb-run' will be installed. Reading dependency for xvfb-run-1.4.2-3... Reading runtime dependency for xvfb-run-1.4.2-3... The package 'r-base31' will be installed. Reading dependency for r-base31-3.1.1-2... Reading runtime dependency for r-base31-3.1.1-2... The package 'r-base31-shlibs' will be installed. Reading dependency for r-base31-shlibs-3.1.1-2... Reading runtime dependency for r-base31-shlibs-3.1.1-2... The package 'getoptbin' will be installed. Reading dependency for getoptbin-1.1.4-3... Reading runtime dependency for getoptbin-1.1.4-3... The following package will be rebuilt: cran-tkrplot-r31 The following 6 additional packages will be installed: getoptbin r-base31 r-base31-dev r-base31-shlibs tcltk-dev xvfb-run Do you want to continue? [Y/n] (assuming default) Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/getoptbin_1.1.4-3_darwin-x86_64.deb Selecting previously deselected package getoptbin. (Reading database ... 7614 files and directories currently installed.) Unpacking getoptbin (from .../getoptbin_1.1.4-3_darwin-x86_64.deb) ... Setting up getoptbin (1.1.4-3) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/r-base31_3.1.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base31-shlibs_3.1.1-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/r-base31-dev_3.1.1-2_darwin-x86_64.deb Selecting previously deselected package r-base31. (Reading database ... 7624 files and directories currently installed.) Unpacking r-base31 (from .../r-base31_3.1.1-2_darwin-x86_64.deb) ... Selecting previously deselected package r-base31-shlibs. Unpacking r-base31-shlibs (from .../r-base31-shlibs_3.1.1-2_darwin-x86_64.deb) ... Selecting previously deselected package r-base31-dev. dpkg: considering removing r-base215-dev in favour of r-base31-dev ... dpkg: yes, will remove r-base215-dev in favour of r-base31-dev. Unpacking r-base31-dev (from .../r-base31-dev_3.1.1-2_darwin-x86_64.deb) ... Setting up r-base31-shlibs (3.1.1-2) ... Setting up r-base31-dev (3.1.1-2) ... Setting up r-base31 (3.1.1-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/tcltk-dev_8.6.1-104_darwin-x86_64.deb Selecting previously deselected package tcltk-dev. (Reading database ... 9541 files and directories currently installed.) Unpacking tcltk-dev (from .../tcltk-dev_8.6.1-104_darwin-x86_64.deb) ... Setting up tcltk-dev (8.6.1-104) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/xvfb-run_1.4.2-3_darwin-x86_64.deb Selecting previously deselected package xvfb-run. (Reading database ... 10862 files and directories currently installed.) Unpacking xvfb-run (from .../xvfb-run_1.4.2-3_darwin-x86_64.deb) ... Setting up xvfb-run (1.4.2-3) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-cran-tkrplot-r31-0.0-23-2 /sw/build.build dpkg-deb: building package `fink-buildlock-cran-tkrplot-r31-0.0-23-2' in `/sw/build.build/fink-buildlock-cran-tkrplot-r31-0.0-23-2_2014.07.27-12.10.36_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-cran-tkrplot-r31-0.0-23-2_2014.07.27-12.10.36_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-cran-tkrplot-r31-0.0-23-2. (Reading database ... 10866 files and directories currently installed.) Unpacking fink-buildlock-cran-tkrplot-r31-0.0-23-2 (from .../fink-buildlock-cran-tkrplot-r31-0.0-23-2_2014.07.27-12.10.36_darwin-x86_64.deb) ... Setting up fink-buildlock-cran-tkrplot-r31-0.0-23-2 (2014.07.27-12.10.36) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.NhOmo env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/tkrplot_0.0-23.tar.gz tkrplot/ tkrplot/MD5 tkrplot/configure.win tkrplot/cleanup tkrplot/DESCRIPTION tkrplot/NAMESPACE tkrplot/man/ tkrplot/man/TkRplot.Rd tkrplot/configure.ac tkrplot/configure tkrplot/src/ tkrplot/src/tcltkimg.c tkrplot/src/Makevars.win tkrplot/src/Makevars.in tkrplot/R/ tkrplot/R/tkrplot.R sudo -u fink-bld [ENV] sh -c /tmp/fink.__9bA /tmp/fink.0gje5 #!/bin/bash -ev export TMPDIR=/sw/build.build/cran-tkrplot-r31-0.0-23-2/tkrplot/tmp BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R pushd .. /sw/build.build/cran-tkrplot-r31-0.0-23-2 /sw/build.build/cran-tkrplot-r31-0.0-23-2/tkrplot if [[ 3.1 > 2.15 ]]; then $BIN_R --verbose CMD build --no-build-vignettes tkrplot else $BIN_R --verbose CMD build --no-vignettes tkrplot fi * checking for file 'tkrplot/DESCRIPTION' ... OK * preparing 'tkrplot': * checking DESCRIPTION meta-information ... OK * cleaning src * running 'cleanup' * checking for LF line-endings in source and make files * checking for empty or unneeded directories * building 'tkrplot_0.0-23.tar.gz' /bin/rm -rf /sw/build.build/root-cran-tkrplot-r31-0.0-23-2 /bin/mkdir -p /sw/build.build/root-cran-tkrplot-r31-0.0-23-2/sw /bin/mkdir -p /sw/build.build/root-cran-tkrplot-r31-0.0-23-2/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-cran-tkrplot-r31-0.0-23-2 sudo -u fink-bld [ENV] sh -c /tmp/fink.hXie1 /tmp/fink._pNny #!/bin/sh -ev BIN_R=/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/bin/R mkdir -p /sw/build.build/root-cran-tkrplot-r31-0.0-23-2/sw/lib/R/3.1/site-library pushd /sw/build.build/cran-tkrplot-r31-0.0-23-2/tkrplot/.. && PKG_CPPFLAGS="-I/sw/include -I/usr/X11/include" `which xvfb-run` $BIN_R --verbose CMD install --library=/sw/build.build/root-cran-tkrplot-r31-0.0-23-2/sw/lib/R/3.1/site-library tkrplot /sw/build.build/cran-tkrplot-r31-0.0-23-2 /sw/build.build/cran-tkrplot-r31-0.0-23-2/tkrplot which xvfb-run * installing *source* package 'tkrplot' ... ** package 'tkrplot' successfully unpacked and MD5 sums checked configure: creating ./config.status config.status: creating src/Makevars ** libs flag-sort -r gcc -ffor-scope -I/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/include -DNDEBUG -I/sw/include -I/sw/include -I/usr/X11R6/include -I/sw/include -fPIC -g -O3 -c tcltkimg.c -o tcltkimg.o flag-sort -r gcc -ffor-scope -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/sw/lib -o tkrplot.dylib tcltkimg.o -L/sw/lib -ltcl8.6 -L/sw/lib -ltk8.6 -L/usr/X11R6/lib -lX11 -Wl,-weak-lXss -lXext -L/sw/Library/Frameworks/R.framework/Versions/3.1/Resources/lib -lR -lintl -Wl,-framework -Wl,CoreFoundation installing to /sw/build.build/root-cran-tkrplot-r31-0.0-23-2/sw/lib/R/3.1/site-library/tkrplot/libs ** R ** preparing package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded * DONE (tkrplot) install_name_tool -id /sw/lib/R/3.1/site-library/tkrplot/libs/tkrplot.dylib /sw/build.build/root-cran-tkrplot-r31-0.0-23-2/sw/lib/R/3.1/site-library/tkrplot/libs/tkrplot.dylib sudo -u fink-bld [ENV] sh -c /tmp/fink.KeSEk /bin/rm -f /sw/build.build/root-cran-tkrplot-r31-0.0-23-2/sw/info/dir /sw/build.build/root-cran-tkrplot-r31-0.0-23-2/sw/info/dir.old /sw/build.build/root-cran-tkrplot-r31-0.0-23-2/sw/share/info/dir /sw/build.build/root-cran-tkrplot-r31-0.0-23-2/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Creating shlibs files... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-cran-tkrplot-r31-0.0-23-2 /sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods dpkg-deb: building package `cran-tkrplot-r31' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/libs/rmods/cran-tkrplot-r31_0.0-23-2_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-cran-tkrplot-r31-0.0-23-2 (Reading database ... 10867 files and directories currently installed.) Removing fink-buildlock-cran-tkrplot-r31-0.0-23-2 ...