printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild microbiomeutil 2>&1 The package 'microbiomeutil' will be built without being installed. Reading build dependency for microbiomeutil-20110519-1... Reading dependency for microbiomeutil-20110519-1... Reading build conflict for microbiomeutil-20110519-1... The following package will be rebuilt: microbiomeutil curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/microbiomeutil-r20110519.tgz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:01 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:02 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:03 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:04 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:05 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:06 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:07 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:08 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:09 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:10 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:11 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:12 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:13 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:14 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:15 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:16 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:17 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:18 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:19 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:20 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:21 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:22 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:23 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:24 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:25 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:26 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:27 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:28 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:29 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:30 --:--:-- 0 curl: (28) Connection timed out after 30064 milliseconds ### execution of curl failed, exit code 28 Downloading the file "microbiomeutil-r20110519.tgz" failed. (1) Give up (2) Retry the same mirror (3) Retry another mirror from your country (4) Retry another mirror from your continent (5) Retry another mirror (6) Retry using next mirror set "sourceforge" How do you want to proceed? [3] (assuming default) curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.sjc.ca.us.finkmirrors.net/microbiomeutil-r20110519.tgz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 127M 0 225k 0 0 304k 0 0:07:08 --:--:-- 0:07:08 303k 0 127M 0 1191k 0 0 678k 0 0:03:12 0:00:01 0:03:11 678k 1 127M 1 2138k 0 0 779k 0 0:02:47 0:00:02 0:02:45 779k 2 127M 2 3195k 0 0 852k 0 0:02:33 0:00:03 0:02:30 852k 3 127M 3 4457k 0 0 940k 0 0:02:18 0:00:04 0:02:14 940k 4 127M 4 5553k 0 0 963k 0 0:02:15 0:00:05 0:02:10 1060k 4 127M 4 6262k 0 0 929k 0 0:02:20 0:00:06 0:02:14 1018k 5 127M 5 7479k 0 0 966k 0 0:02:14 0:00:07 0:02:07 1069k 6 127M 6 8704k 0 0 995k 0 0:02:11 0:00:08 0:02:03 1103k 7 127M 7 9989k 0 0 1025k 0 0:02:07 0:00:09 0:01:58 1105k 8 127M 8 11.0M 0 0 1052k 0 0:02:04 0:00:10 0:01:54 1155k 9 127M 9 11.5M 0 0 1003k 0 0:02:10 0:00:11 0:01:59 1103k 9 127M 9 12.4M 0 0 997k 0 0:02:10 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127M 99 126M 0 0 961k 0 0:02:15 0:02:14 0:00:01 314k 99 127M 99 126M 0 0 957k 0 0:02:16 0:02:15 0:00:01 344k 100 127M 100 127M 0 0 955k 0 0:02:16 0:02:16 --:--:-- 405k Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-microbiomeutil-20110519-1 /sw/build.build dpkg-deb: building package `fink-buildlock-microbiomeutil-20110519-1' in `/sw/build.build/fink-buildlock-microbiomeutil-20110519-1_2014.07.31-17.25.39_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-microbiomeutil-20110519-1_2014.07.31-17.25.39_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-microbiomeutil-20110519-1. (Reading database ... 4296 files and directories currently installed.) Unpacking fink-buildlock-microbiomeutil-20110519-1 (from .../fink-buildlock-microbiomeutil-20110519-1_2014.07.31-17.25.39_darwin-x86_64.deb) ... Setting up fink-buildlock-microbiomeutil-20110519-1 (2014.07.31-17.25.39) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.OhXvD env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/microbiomeutil-r20110519.tgz microbiomeutil-r20110519/ microbiomeutil-r20110519/AmosCmp16Spipeline/ microbiomeutil-r20110519/AmosCmp16Spipeline/LICENSE microbiomeutil-r20110519/AmosCmp16Spipeline/__conf.txt microbiomeutil-r20110519/AmosCmp16Spipeline/PyLib/ microbiomeutil-r20110519/AmosCmp16Spipeline/PyLib/homology_trim_lucy_output.py microbiomeutil-r20110519/AmosCmp16Spipeline/PyLib/contig_layout_to_scaffold.pyc microbiomeutil-r20110519/AmosCmp16Spipeline/PyLib/CdbTools.py microbiomeutil-r20110519/AmosCmp16Spipeline/PyLib/FastaReader.py microbiomeutil-r20110519/AmosCmp16Spipeline/PyLib/contig_layout_to_scaffold.py microbiomeutil-r20110519/AmosCmp16Spipeline/PyLib/CmdRunner.py microbiomeutil-r20110519/AmosCmp16Spipeline/PyLib/homology_trim_lucy_output.pyc microbiomeutil-r20110519/AmosCmp16Spipeline/README microbiomeutil-r20110519/AmosCmp16Spipeline/AmosPatch/ microbiomeutil-r20110519/AmosCmp16Spipeline/AmosPatch/AMOScmp microbiomeutil-r20110519/AmosCmp16Spipeline/conf.txt microbiomeutil-r20110519/AmosCmp16Spipeline/amosCmp16Spipeline.py microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/ microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/reads.fasta.cidx microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/HMP_MOCK_16S_references.fasta.nhr microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/HMP_MOCK_16S_references.fasta microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/reads.fasta.asm.seqs microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/reads.fasta.asm.quals microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/reads.quals.cidx microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/reads.fasta microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/reads.pairs microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/HMP_MOCK_16S_references.fasta.nsq microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/reads.fasta.asm.log microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/HMP_MOCK_16S_references.fasta.nin microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/runMe.sh microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/HMP_MOCK_16S_references.fasta.cidx microbiomeutil-r20110519/AmosCmp16Spipeline/sample_data/reads.quals microbiomeutil-r20110519/ChimeraSlayer/ microbiomeutil-r20110519/ChimeraSlayer/util/ microbiomeutil-r20110519/ChimeraSlayer/util/CS_add_taxonomy.pl microbiomeutil-r20110519/ChimeraSlayer/util/CMCS_to_treeImg.pl microbiomeutil-r20110519/ChimeraSlayer/util/breakpoint_to_profile.pl microbiomeutil-r20110519/ChimeraSlayer/util/merge_CS_n_CM_breakpoints.pl microbiomeutil-r20110519/ChimeraSlayer/util/merge_CM_CS_outputs.pl microbiomeutil-r20110519/ChimeraSlayer/PerlLib/ microbiomeutil-r20110519/ChimeraSlayer/PerlLib/Fasta_reader.pm microbiomeutil-r20110519/ChimeraSlayer/PerlLib/TaxonomyGraph.pm microbiomeutil-r20110519/ChimeraSlayer/PerlLib/NAST_to_Eco_coords.pm microbiomeutil-r20110519/ChimeraSlayer/PerlLib/CdbTools.pm microbiomeutil-r20110519/ChimeraSlayer/PerlLib/AlignCompare.pm microbiomeutil-r20110519/ChimeraSlayer/PerlLib/BHStats.pm microbiomeutil-r20110519/ChimeraSlayer/LICENSE microbiomeutil-r20110519/ChimeraSlayer/__KmerChimerDetector/ microbiomeutil-r20110519/ChimeraSlayer/__KmerChimerDetector/KmerChimerDetector.pl microbiomeutil-r20110519/ChimeraSlayer/ChimeraSlayer.pl microbiomeutil-r20110519/ChimeraSlayer/__BroadBellerophon/ microbiomeutil-r20110519/ChimeraSlayer/__BroadBellerophon/run_bellerophon_prog.pl microbiomeutil-r20110519/ChimeraSlayer/__BroadBellerophon/BellerophonGG.pl microbiomeutil-r20110519/ChimeraSlayer/__BroadBellerophon/masks/ microbiomeutil-r20110519/ChimeraSlayer/__BroadBellerophon/masks/lanemask.NAST microbiomeutil-r20110519/ChimeraSlayer/__BroadBellerophon/masks/eco.prokMSA microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/ microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/simple_art_chimera_constructor.pl microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/ROC_writer.pl microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/SeqSubstrates/ microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/SeqSubstrates/rRNA16S.toChimerize.PerID_compare microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/SeqSubstrates/rRNA16S.toChimerize.taxonomy microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/SeqSubstrates/rRNA16S.toChimerize.fasta microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/SeqSubstrates/rRNA16S.toChimerize.fasta.NAST microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/PerID_Pairs_via_Taxonomy.pl microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/art_chimera_constructor.pl microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/write_100_chimeras_per_div.pl microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/PerID_Pairs_All_vs_All.pl microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/chimera_control_extractor.pl microbiomeutil-r20110519/ChimeraSlayer/__ChimeraConstructorToolkit/NAST_evolve.pl microbiomeutil-r20110519/ChimeraSlayer/Makefile microbiomeutil-r20110519/ChimeraSlayer/ChimeraParentSelector/ microbiomeutil-r20110519/ChimeraSlayer/ChimeraParentSelector/CM_plotter.pl microbiomeutil-r20110519/ChimeraSlayer/ChimeraParentSelector/chimeraParentSelector.pl microbiomeutil-r20110519/ChimeraSlayer/ChimeraParentSelector/run_chimeraParentSelector.pl microbiomeutil-r20110519/ChimeraSlayer/ChimeraParentSelector/CPC_to_CPS.pl microbiomeutil-r20110519/ChimeraSlayer/ChimeraParentSelector/CPS_to_RENAST.pl microbiomeutil-r20110519/ChimeraSlayer/ChimeraPhyloChecker/ microbiomeutil-r20110519/ChimeraSlayer/ChimeraPhyloChecker/ChimeraPhyloChecker.pl microbiomeutil-r20110519/ChimeraSlayer/ChimeraPhyloChecker/CPS_to_CPC.pl microbiomeutil-r20110519/ChimeraSlayer/sample_data/ microbiomeutil-r20110519/ChimeraSlayer/sample_data/Makefile microbiomeutil-r20110519/ChimeraSlayer/sample_data/runMe.sh microbiomeutil-r20110519/ChimeraSlayer/sample_data/chims.NAST microbiomeutil-r20110519/Makefile microbiomeutil-r20110519/NAST-iEr/ microbiomeutil-r20110519/NAST-iEr/util/ microbiomeutil-r20110519/NAST-iEr/util/mfasta_remove_allGapCols.pl microbiomeutil-r20110519/NAST-iEr/util/show_malign_no_gap_no_identical_cols.pl microbiomeutil-r20110519/NAST-iEr/util/apply_NAST_MASK.pl microbiomeutil-r20110519/NAST-iEr/util/mfasta_remove_gaps.pl microbiomeutil-r20110519/NAST-iEr/util/show_malign_no_gap.pl microbiomeutil-r20110519/NAST-iEr/util/masks/ microbiomeutil-r20110519/NAST-iEr/util/masks/lanemask.NAST microbiomeutil-r20110519/NAST-iEr/util/masks/eco.prokMSA microbiomeutil-r20110519/NAST-iEr/PerlLib/ microbiomeutil-r20110519/NAST-iEr/PerlLib/Fasta_reader.pm microbiomeutil-r20110519/NAST-iEr/PerlLib/Nuc_translator.pm microbiomeutil-r20110519/NAST-iEr/PerlLib/CdbTools.pm microbiomeutil-r20110519/NAST-iEr/LICENSE microbiomeutil-r20110519/NAST-iEr/run_NAST-iEr.pl microbiomeutil-r20110519/NAST-iEr/iterative_refinement/ microbiomeutil-r20110519/NAST-iEr/iterative_refinement/quant_differences.pl microbiomeutil-r20110519/NAST-iEr/iterative_refinement/iteratively_realign_db_selfsearch.pl microbiomeutil-r20110519/NAST-iEr/iterative_refinement/compare_DBs.pl microbiomeutil-r20110519/NAST-iEr/Makefile microbiomeutil-r20110519/NAST-iEr/README microbiomeutil-r20110519/NAST-iEr/NAST-iEr.c microbiomeutil-r20110519/NAST-iEr/sample_data/ microbiomeutil-r20110519/NAST-iEr/sample_data/testForUtils.pl microbiomeutil-r20110519/NAST-iEr/sample_data/Makefile microbiomeutil-r20110519/NAST-iEr/sample_data/formatdb.log microbiomeutil-r20110519/NAST-iEr/sample_data/runMe.sh microbiomeutil-r20110519/NAST-iEr/sample_data/template_seqs.NAST microbiomeutil-r20110519/NAST-iEr/sample_data/query_seq.fasta microbiomeutil-r20110519/README microbiomeutil-r20110519/RESOURCES/ microbiomeutil-r20110519/RESOURCES/rRNA16S.gold.fasta microbiomeutil-r20110519/RESOURCES/results microbiomeutil-r20110519/RESOURCES/rRNA16S.gold.taxonomy microbiomeutil-r20110519/RESOURCES/accs microbiomeutil-r20110519/RESOURCES/rRNA16S.gold.NAST_ALIGNED.fasta microbiomeutil-r20110519/RESOURCES/Makefile microbiomeutil-r20110519/RESOURCES/README microbiomeutil-r20110519/RESOURCES/formatdb.log microbiomeutil-r20110519/RESOURCES/identify_conflicting_taxons.pl microbiomeutil-r20110519/RESOURCES/RDP/ microbiomeutil-r20110519/RESOURCES/RDP/util/ microbiomeutil-r20110519/RESOURCES/RDP/util/RDP_to_tab.pl microbiomeutil-r20110519/RESOURCES/RDP/util/RDP_tack_classification_onto_fasta_header.pl microbiomeutil-r20110519/RESOURCES/RDP/classifier_data_dir/ microbiomeutil-r20110519/RESOURCES/RDP/classifier_data_dir/genus_wordConditionalProbList.txt microbiomeutil-r20110519/RESOURCES/RDP/classifier_data_dir/bergeyTrainingTree.xml microbiomeutil-r20110519/RESOURCES/RDP/classifier_data_dir/logWordPrior.txt microbiomeutil-r20110519/RESOURCES/RDP/classifier_data_dir/rRNAClassifier.properties microbiomeutil-r20110519/RESOURCES/RDP/classifier_data_dir/wordConditionalProbIndexArr.txt microbiomeutil-r20110519/TreeChopper/ microbiomeutil-r20110519/TreeChopper/util/ microbiomeutil-r20110519/TreeChopper/util/slclust microbiomeutil-r20110519/TreeChopper/util/tree_report_nodes.pl microbiomeutil-r20110519/TreeChopper/util/print.pl microbiomeutil-r20110519/TreeChopper/util/tree_leaf_pairs_within_dist.pl microbiomeutil-r20110519/TreeChopper/LICENSE microbiomeutil-r20110519/TreeChopper/README.txt microbiomeutil-r20110519/TreeChopper/treeChopper.pl microbiomeutil-r20110519/TreeChopper/sample_data/ microbiomeutil-r20110519/TreeChopper/sample_data/output_0.02_0.7.OTUs microbiomeutil-r20110519/TreeChopper/sample_data/2percent.OTUs microbiomeutil-r20110519/TreeChopper/sample_data/mockref.RDPNAST.tree microbiomeutil-r20110519/TreeChopper/sample_data/runMe.sh microbiomeutil-r20110519/TreeChopper/sample_data/2percent.j0.7.OTUs microbiomeutil-r20110519/WigeoN/ microbiomeutil-r20110519/WigeoN/util/ microbiomeutil-r20110519/WigeoN/util/eco_nast_freq.pl microbiomeutil-r20110519/WigeoN/util/all_vs_all_WigeoN.mod.pl microbiomeutil-r20110519/WigeoN/util/compute_quant_bins.pl microbiomeutil-r20110519/WigeoN/util/smooth.pl microbiomeutil-r20110519/WigeoN/util/makeConservationProfile.pl microbiomeutil-r20110519/WigeoN/util/eco.prokMSA microbiomeutil-r20110519/WigeoN/util/apply_eco_Mask.pl microbiomeutil-r20110519/WigeoN/util/all_vs_all_WigeoN.pl microbiomeutil-r20110519/WigeoN/PerlLib/ microbiomeutil-r20110519/WigeoN/PerlLib/Fasta_reader.pm microbiomeutil-r20110519/WigeoN/PerlLib/CdbTools.pm microbiomeutil-r20110519/WigeoN/PerlLib/BHStats.pm microbiomeutil-r20110519/WigeoN/LICENSE microbiomeutil-r20110519/WigeoN/run_CM_to_WigeoN.pl microbiomeutil-r20110519/WigeoN/Makefile microbiomeutil-r20110519/WigeoN/README microbiomeutil-r20110519/WigeoN/run_WigeoN.pl microbiomeutil-r20110519/WigeoN/data/ microbiomeutil-r20110519/WigeoN/data/DE_quantiles.dat microbiomeutil-r20110519/WigeoN/data/rRNA16S.gold.NAST_ALIGNED.fasta.cons microbiomeutil-r20110519/WigeoN/data/eco.prokMSA microbiomeutil-r20110519/WigeoN/data/WigeoN.AllVsAllReferences.txt.gz microbiomeutil-r20110519/WigeoN/sample_data/ microbiomeutil-r20110519/WigeoN/sample_data/Makefile microbiomeutil-r20110519/WigeoN/sample_data/runMe.sh microbiomeutil-r20110519/WigeoN/sample_data/chims.NAST microbiomeutil-r20110519/WigeoN/WigeoN.pl microbiomeutil-r20110519/docs/ microbiomeutil-r20110519/docs/old.microbiomeutil.asciidoc microbiomeutil-r20110519/docs/microbiomeutil.html microbiomeutil-r20110519/docs/microbiomeutil.asciidoc microbiomeutil-r20110519/docs/images/ microbiomeutil-r20110519/docs/images/top-hmp.jpg microbiomeutil-r20110519/docs/images/broad-logo.jpg microbiomeutil-r20110519/docs/images/broad-hmp-banner.gif sudo -u fink-bld [ENV] sh -c /tmp/fink.W6qh6 make X=`pwd`; \ for i in NAST-iEr ChimeraSlayer WigeoN RESOURCES; \ do echo '<<<' $i '>>>'; cd $X/$i; make all; done <<< NAST-iEr >>> gcc NAST-iEr.c -o NAST-iEr NAST-iEr.c:106:8: warning: implicit declaration of function 'isprint' is invalid in C99 [-Wimplicit-function-declaration] if (isprint (optopt)) { ^ 1 warning generated. <<< ChimeraSlayer >>> make[1]: Nothing to be done for `all'. <<< WigeoN >>> make[1]: Nothing to be done for `all'. <<< RESOURCES >>> make[1]: Nothing to be done for `all'. /bin/rm -rf /sw/build.build/root-microbiomeutil-20110519-1 /bin/mkdir -p /sw/build.build/root-microbiomeutil-20110519-1/sw /bin/mkdir -p /sw/build.build/root-microbiomeutil-20110519-1/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-microbiomeutil-20110519-1 sudo -u fink-bld [ENV] sh -c /tmp/fink.Mn8RT /tmp/fink.KbPIT #!/bin/sh -ev mkdir -p /sw/build.build/root-microbiomeutil-20110519-1/sw/share/microbiomeutil/doc install -m 644 docs/microbiomeutil.{asciidoc,html} /sw/build.build/root-microbiomeutil-20110519-1/sw/share/microbiomeutil/doc cp -Rp docs/images /sw/build.build/root-microbiomeutil-20110519-1/sw/share/microbiomeutil/doc/ mkdir -p /sw/build.build/root-microbiomeutil-20110519-1/sw/lib/microbiomeutil cp -Rp ChimeraSlayer /sw/build.build/root-microbiomeutil-20110519-1/sw/lib/microbiomeutil cp -Rp NAST-iEr /sw/build.build/root-microbiomeutil-20110519-1/sw/lib/microbiomeutil cp -Rp WigeoN /sw/build.build/root-microbiomeutil-20110519-1/sw/lib/microbiomeutil cp -Rp RESOURCES /sw/build.build/root-microbiomeutil-20110519-1/sw/lib/microbiomeutil sudo -u fink-bld [ENV] sh -c /tmp/fink.H8gQd /usr/bin/install -d -m 700 /sw/build.build/root-microbiomeutil-20110519-1/sw/share/doc/microbiomeutil /bin/cp -r README /sw/build.build/root-microbiomeutil-20110519-1/sw/share/doc/microbiomeutil/ /bin/chmod -R go=u-w /sw/build.build/root-microbiomeutil-20110519-1/sw/share/doc/microbiomeutil /bin/rm -f /sw/build.build/root-microbiomeutil-20110519-1/sw/info/dir /sw/build.build/root-microbiomeutil-20110519-1/sw/info/dir.old /sw/build.build/root-microbiomeutil-20110519-1/sw/share/info/dir /sw/build.build/root-microbiomeutil-20110519-1/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-microbiomeutil-20110519-1 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `microbiomeutil' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/microbiomeutil_20110519-1_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-microbiomeutil-20110519-1 (Reading database ... 4297 files and directories currently installed.) Removing fink-buildlock-microbiomeutil-20110519-1 ...