printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild rdkit 2>&1 The package 'rdkit' will be built without being installed. Reading build dependency for rdkit-2014.03.1-3... Reading dependency for rdkit-2014.03.1-3... Reading dependency for rdkit-shlibs-2014.03.1-3... Reading dependency for rdkit-dev-2014.03.1-3... Reading build conflict for rdkit-2014.03.1-3... The package 'boost1.53.python27' will be installed. Reading dependency for boost1.53.python27-1.53.0-2... Reading runtime dependency for boost1.53.python27-1.53.0-2... The package 'python27' will be installed. Reading dependency for python27-2.7.8-1... Reading runtime dependency for python27-2.7.8-1... The package 'numpy-py27' will be installed. Reading dependency for numpy-py27-1.8.1-1... Reading runtime dependency for numpy-py27-1.8.1-1... The package 'sqlite3-dev' will be installed. Reading dependency for sqlite3-dev-3.8.3.1-1... Reading runtime dependency for sqlite3-dev-3.8.3.1-1... The package 'cmake' will be installed. Reading dependency for cmake-2.8.12-2... Reading runtime dependency for cmake-2.8.12-2... The package 'swig' will be installed. Reading dependency for swig-3.0.0-1... Reading runtime dependency for swig-3.0.0-1... The package 'junit' will be installed. Reading dependency for junit-3.8.1-36... Reading runtime dependency for junit-3.8.1-36... The package 'boost1.53.nopython-shlibs' will be installed. Reading dependency for boost1.53.nopython-shlibs-1.53.0-2... Reading runtime dependency for boost1.53.nopython-shlibs-1.53.0-2... The package 'boost1.53.python27-shlibs' will be installed. Reading dependency for boost1.53.python27-shlibs-1.53.0-2... Reading runtime dependency for boost1.53.python27-shlibs-1.53.0-2... The package 'python27-shlibs' will be installed. Reading dependency for python27-shlibs-2.7.8-1... Reading runtime dependency for python27-shlibs-2.7.8-1... The package 'sqlite3-shlibs' will be installed. Reading dependency for sqlite3-shlibs-3.8.3.1-1... Reading runtime dependency for sqlite3-shlibs-3.8.3.1-1... The package 'pil-py27' will be installed. Reading dependency for pil-py27-2.5.1-1... Reading runtime dependency for pil-py27-2.5.1-1... The package 'blt-shlibs' will be installed. Reading dependency for blt-shlibs-2.4z-160... Reading runtime dependency for blt-shlibs-2.4z-160... The package 'db53-aes-shlibs' will be installed. Reading dependency for db53-aes-shlibs-5.3.21-2... Reading runtime dependency for db53-aes-shlibs-5.3.21-2... The package 'expat1-shlibs' will be installed. Reading dependency for expat1-shlibs-2.1.0-1... Reading runtime dependency for expat1-shlibs-2.1.0-1... The package 'gdbm3-shlibs' will be installed. Reading dependency for gdbm3-shlibs-1.8.3-4... Reading runtime dependency for gdbm3-shlibs-1.8.3-4... The package 'libffi6-shlibs' will be installed. Reading dependency for libffi6-shlibs-3.1-1... Reading runtime dependency for libffi6-shlibs-3.1-1... The package 'libncursesw5-shlibs' will be installed. Reading dependency for libncursesw5-shlibs-5.9-20110507-1... Reading runtime dependency for libncursesw5-shlibs-5.9-20110507-1... The package 'openssl100-shlibs' will be installed. Reading dependency for openssl100-shlibs-1.0.1h-1... Reading runtime dependency for openssl100-shlibs-1.0.1h-1... The package 'readline6-shlibs' will be installed. Reading dependency for readline6-shlibs-6.3.6-1... Reading runtime dependency for readline6-shlibs-6.3.6-1... The package 'tcltk' will be installed. Reading dependency for tcltk-8.6.1-104... Reading runtime dependency for tcltk-8.6.1-104... The package 'nose-py27' will be installed. Reading dependency for nose-py27-1.3.0-1... Reading runtime dependency for nose-py27-1.3.0-1... The package 'libidn-shlibs' will be installed. Reading dependency for libidn-shlibs-1.22-6... Reading runtime dependency for libidn-shlibs-1.22-6... The package 'libpcre1-shlibs' will be installed. Reading dependency for libpcre1-shlibs-8.35-1... Reading runtime dependency for libpcre1-shlibs-8.35-1... The package 'cffi-py27' will be installed. Reading dependency for cffi-py27-0.8.6-1... Reading runtime dependency for cffi-py27-0.8.6-1... The package 'freetype219-shlibs' will be installed. Reading dependency for freetype219-shlibs-2.4.12-1... Reading runtime dependency for freetype219-shlibs-2.4.12-1... The package 'lcms2-shlibs' will be installed. Reading dependency for lcms2-shlibs-2.4-2... Reading runtime dependency for lcms2-shlibs-2.4-2... The package 'libjpeg9-shlibs' will be installed. Reading dependency for libjpeg9-shlibs-9a-1... Reading runtime dependency for libjpeg9-shlibs-9a-1... The package 'libtiff5-shlibs' will be installed. Reading dependency for libtiff5-shlibs-4.0.3-5... Reading runtime dependency for libtiff5-shlibs-4.0.3-5... The package 'libwebp5-shlibs' will be installed. Reading dependency for libwebp5-shlibs-0.4.0-1... Reading runtime dependency for libwebp5-shlibs-0.4.0-1... The package 'tcltk-shlibs' will be installed. Reading dependency for tcltk-shlibs-8.6.1-104... Reading runtime dependency for tcltk-shlibs-8.6.1-104... The package 'fontconfig2-shlibs' will be installed. Reading dependency for fontconfig2-shlibs-2.10.2-1... Reading runtime dependency for fontconfig2-shlibs-2.10.2-1... The package 'xft2-shlibs' will be installed. Reading dependency for xft2-shlibs-2.2.0-3... Reading runtime dependency for xft2-shlibs-2.2.0-3... The package 'setuptools-tng-py27' will be installed. Reading dependency for setuptools-tng-py27-5.1-1... Reading runtime dependency for setuptools-tng-py27-5.1-1... The package 'pycparser-py27' will be installed. Reading dependency for pycparser-py27-2.10-1... Reading runtime dependency for pycparser-py27-2.10-1... The package 'libjbig-shlibs' will be installed. Reading dependency for libjbig-shlibs-2.0-1... Reading runtime dependency for libjbig-shlibs-2.0-1... The package 'liblzma5-shlibs' will be installed. Reading dependency for liblzma5-shlibs-5.0.5-2... Reading runtime dependency for liblzma5-shlibs-5.0.5-2... The package 'fontconfig-config' will be installed. Reading dependency for fontconfig-config-2.10.2-1... Reading runtime dependency for fontconfig-config-2.10.2-1... The following package will be rebuilt: rdkit The following 38 additional packages will be installed: blt-shlibs boost1.53.nopython-shlibs boost1.53.python27 boost1.53.python27-shlibs cffi-py27 cmake db53-aes-shlibs expat1-shlibs fontconfig-config fontconfig2-shlibs freetype219-shlibs gdbm3-shlibs junit lcms2-shlibs libffi6-shlibs libidn-shlibs libjbig-shlibs libjpeg9-shlibs liblzma5-shlibs libncursesw5-shlibs libpcre1-shlibs libtiff5-shlibs libwebp5-shlibs nose-py27 numpy-py27 openssl100-shlibs pil-py27 pycparser-py27 python27 python27-shlibs readline6-shlibs setuptools-tng-py27 sqlite3-dev sqlite3-shlibs swig tcltk tcltk-shlibs xft2-shlibs Do you want to continue? [Y/n] (assuming default) curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/RDKit_2014_03_1.tgz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 1 22.6M 1 382k 0 0 351k 0 0:01:05 0:00:01 0:01:04 351k 4 22.6M 4 1099k 0 0 437k 0 0:00:52 0:00:02 0:00:50 437k 5 22.6M 5 1353k 0 0 362k 0 0:01:03 0:00:03 0:01:00 362k 5 22.6M 5 1365k 0 0 336k 0 0:01:08 0:00:04 0:01:04 335k 10 22.6M 10 2405k 0 0 474k 0 0:00:48 0:00:05 0:00:43 487k 16 22.6M 16 3922k 0 0 646k 0 0:00:35 0:00:06 0:00:29 711k 23 22.6M 23 5541k 0 0 784k 0 0:00:29 0:00:07 0:00:22 975k 30 22.6M 30 7031k 0 0 871k 0 0:00:26 0:00:08 0:00:18 1309k 32 22.6M 32 7623k 0 0 832k 0 0:00:27 0:00:09 0:00:18 1229k 34 22.6M 34 8014k 0 0 795k 0 0:00:29 0:00:10 0:00:19 1119k 35 22.6M 35 8129k 0 0 734k 0 0:00:31 0:00:11 0:00:20 841k 35 22.6M 35 8215k 0 0 679k 0 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--connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/INCHI-1-API.ZIP % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:01 --:--:-- 0 0 0 0 0 0 0 0 0 --:--:-- 0:00:01 --:--:-- 0 8 2638k 8 235k 0 0 104k 0 0:00:25 0:00:02 0:00:23 104k 24 2638k 24 641k 0 0 197k 0 0:00:13 0:00:03 0:00:10 197k 45 2638k 45 1203k 0 0 283k 0 0:00:09 0:00:04 0:00:05 283k 80 2638k 80 2123k 0 0 405k 0 0:00:06 0:00:05 0:00:01 500k 84 2638k 84 2222k 0 0 331k 0 0:00:07 0:00:06 0:00:01 430k 90 2638k 90 2382k 0 0 328k 0 0:00:08 0:00:07 0:00:01 428k 98 2638k 98 2595k 0 0 298k 0 0:00:08 0:00:08 --:--:-- 358k 99 2638k 99 2638k 0 0 285k 0 0:00:09 0:00:09 --:--:-- 286k 100 2638k 100 2638k 0 0 285k 0 0:00:09 0:00:09 --:--:-- 128k Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/boost1.53.nopython-shlibs_1.53.0-2_darwin-x86_64.deb Selecting previously deselected package boost1.53.nopython-shlibs. (Reading database ... 4296 files and directories currently installed.) Unpacking boost1.53.nopython-shlibs (from .../boost1.53.nopython-shlibs_1.53.0-2_darwin-x86_64.deb) ... Setting up boost1.53.nopython-shlibs (1.53.0-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/crypto/db53-aes-shlibs_5.3.21-2_darwin-x86_64.deb Selecting previously deselected package db53-aes-shlibs. (Reading database ... 4347 files and directories currently installed.) Unpacking db53-aes-shlibs (from .../db53-aes-shlibs_5.3.21-2_darwin-x86_64.deb) ... Setting up db53-aes-shlibs (5.3.21-2) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/base/expat1-shlibs_2.1.0-1_darwin-x86_64.deb Selecting previously deselected package expat1-shlibs. (Reading database ... 4357 files and directories currently installed.) Unpacking expat1-shlibs (from .../expat1-shlibs_2.1.0-1_darwin-x86_64.deb) ... Setting up expat1-shlibs (2.1.0-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/freetype219-shlibs_2.4.12-1_darwin-x86_64.deb Selecting previously deselected package freetype219-shlibs. (Reading database ... 4362 files and directories currently installed.) Unpacking freetype219-shlibs (from .../freetype219-shlibs_2.4.12-1_darwin-x86_64.deb) ... Setting up freetype219-shlibs (2.4.12-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/gdbm3-shlibs_1.8.3-4_darwin-x86_64.deb Selecting previously deselected package gdbm3-shlibs. (Reading database ... 4373 files and directories currently installed.) Unpacking gdbm3-shlibs (from .../gdbm3-shlibs_1.8.3-4_darwin-x86_64.deb) ... Setting up gdbm3-shlibs (1.8.3-4) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/junit_3.8.1-36_darwin-x86_64.deb Selecting previously deselected package junit. (Reading database ... 4381 files and directories currently installed.) Unpacking junit (from .../junit_3.8.1-36_darwin-x86_64.deb) ... Setting up junit (3.8.1-36) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/graphics/lcms2-shlibs_2.4-2_darwin-x86_64.deb Selecting previously deselected package lcms2-shlibs. 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RDKit_2014_03_1/rdkit/ML/ModelPackage/test_list.py RDKit_2014_03_1/rdkit/ML/ModelPackage/Packager.py RDKit_2014_03_1/rdkit/ML/ModelPackage/test_data/ RDKit_2014_03_1/rdkit/ML/ModelPackage/test_data/Jan9_build3_pkg.pkl RDKit_2014_03_1/rdkit/ML/ModelPackage/test_data/Jan9_build3_model.pkl RDKit_2014_03_1/rdkit/ML/ModelPackage/test_data/Jan9_build3_calc.dsc RDKit_2014_03_1/rdkit/ML/ModelPackage/UnitTestPackage.py RDKit_2014_03_1/rdkit/ML/ModelPackage/PackageUtils.py RDKit_2014_03_1/rdkit/ML/ModelPackage/__init__.py RDKit_2014_03_1/rdkit/ML/BuildComposite.py RDKit_2014_03_1/rdkit/ML/Neural/ RDKit_2014_03_1/rdkit/ML/Neural/test_list.py RDKit_2014_03_1/rdkit/ML/Neural/Network.py RDKit_2014_03_1/rdkit/ML/Neural/UnitTestTrainer.py RDKit_2014_03_1/rdkit/ML/Neural/CrossValidate.py RDKit_2014_03_1/rdkit/ML/Neural/architecture.txt RDKit_2014_03_1/rdkit/ML/Neural/ActFuncs.py RDKit_2014_03_1/rdkit/ML/Neural/__init__.py RDKit_2014_03_1/rdkit/ML/Neural/Trainers.py RDKit_2014_03_1/rdkit/ML/Neural/NetNode.py RDKit_2014_03_1/rdkit/ML/AnalyzeComposite.py RDKit_2014_03_1/rdkit/ML/UnitTestBuildComposite.py RDKit_2014_03_1/rdkit/ML/EnrichPlot.py RDKit_2014_03_1/rdkit/ML/Scoring/ RDKit_2014_03_1/rdkit/ML/Scoring/test_list.py RDKit_2014_03_1/rdkit/ML/Scoring/UnitTestScoring.py RDKit_2014_03_1/rdkit/ML/Scoring/Scoring.py RDKit_2014_03_1/rdkit/ML/Scoring/__init__.py RDKit_2014_03_1/rdkit/ML/Descriptors/ RDKit_2014_03_1/rdkit/ML/Descriptors/test_list.py RDKit_2014_03_1/rdkit/ML/Descriptors/Parser.py RDKit_2014_03_1/rdkit/ML/Descriptors/UnitTestCOMServer.py RDKit_2014_03_1/rdkit/ML/Descriptors/CompoundDescriptors.py RDKit_2014_03_1/rdkit/ML/Descriptors/UnitTestParser.py RDKit_2014_03_1/rdkit/ML/Descriptors/test_data/ RDKit_2014_03_1/rdkit/ML/Descriptors/test_data/ferro.dsc RDKit_2014_03_1/rdkit/ML/Descriptors/test_data/molcalc.dsc RDKit_2014_03_1/rdkit/ML/Descriptors/Descriptors.py RDKit_2014_03_1/rdkit/ML/Descriptors/MoleculeDescriptors.py RDKit_2014_03_1/rdkit/ML/Descriptors/UnitTestDescriptors.py RDKit_2014_03_1/rdkit/ML/Descriptors/__init__.py RDKit_2014_03_1/rdkit/ML/Descriptors/UnitTestMolDescriptors.py RDKit_2014_03_1/rdkit/ML/__init__.py RDKit_2014_03_1/rdkit/ML/ScreenComposite.py RDKit_2014_03_1/rdkit/ML/GrowComposite.py RDKit_2014_03_1/rdkit/DataStructs/ RDKit_2014_03_1/rdkit/DataStructs/test_list.py RDKit_2014_03_1/rdkit/DataStructs/UnitTestBitEnsemble.py RDKit_2014_03_1/rdkit/DataStructs/BitEnsemble.py RDKit_2014_03_1/rdkit/DataStructs/TopNContainer.py RDKit_2014_03_1/rdkit/DataStructs/UnitTestBitVect.py RDKit_2014_03_1/rdkit/DataStructs/BitVect.py RDKit_2014_03_1/rdkit/DataStructs/HierarchyVis.py RDKit_2014_03_1/rdkit/DataStructs/SparseIntVect.py RDKit_2014_03_1/rdkit/DataStructs/BitEnsembleDb.py RDKit_2014_03_1/rdkit/DataStructs/test_data/ RDKit_2014_03_1/rdkit/DataStructs/test_data/pubchem_fps.dm.pkl RDKit_2014_03_1/rdkit/DataStructs/test_data/pubchem_fps.pkl RDKit_2014_03_1/rdkit/DataStructs/BitUtils.py RDKit_2014_03_1/rdkit/DataStructs/UnitTestcBitVect.py RDKit_2014_03_1/rdkit/DataStructs/UnitTestcBitVect2.py RDKit_2014_03_1/rdkit/DataStructs/UnitTestTopNContainer.py RDKit_2014_03_1/rdkit/DataStructs/LazySignature.py RDKit_2014_03_1/rdkit/DataStructs/__init__.py RDKit_2014_03_1/rdkit/DataStructs/VectCollection.py RDKit_2014_03_1/rdkit/DataManip/ RDKit_2014_03_1/rdkit/DataManip/__init__.py RDKit_2014_03_1/rdkit/DataManip/Metric/ RDKit_2014_03_1/rdkit/DataManip/Metric/__init__.py RDKit_2014_03_1/rdkit/sping/ RDKit_2014_03_1/rdkit/sping/SVG/ RDKit_2014_03_1/rdkit/sping/SVG/__init__.py RDKit_2014_03_1/rdkit/sping/SVG/pidSVG.py RDKit_2014_03_1/rdkit/sping/README RDKit_2014_03_1/rdkit/sping/ReportLab/ RDKit_2014_03_1/rdkit/sping/ReportLab/pidReportLab.py RDKit_2014_03_1/rdkit/sping/ReportLab/__init__.py RDKit_2014_03_1/rdkit/sping/Qt/ RDKit_2014_03_1/rdkit/sping/Qt/pidQt.py RDKit_2014_03_1/rdkit/sping/Qt/__init__.py RDKit_2014_03_1/rdkit/sping/Qt/pidQt4.py RDKit_2014_03_1/rdkit/sping/colors.py RDKit_2014_03_1/rdkit/sping/stringformat.py RDKit_2014_03_1/rdkit/sping/WX/ RDKit_2014_03_1/rdkit/sping/WX/pidWX.py RDKit_2014_03_1/rdkit/sping/WX/__init__.py RDKit_2014_03_1/rdkit/sping/WX/pidWxDc.py RDKit_2014_03_1/rdkit/sping/tests/ RDKit_2014_03_1/rdkit/sping/tests/testallps.py RDKit_2014_03_1/rdkit/sping/tests/pidtest.py RDKit_2014_03_1/rdkit/sping/tests/pstests.py RDKit_2014_03_1/rdkit/sping/tests/__init__.py RDKit_2014_03_1/rdkit/sping/util/ RDKit_2014_03_1/rdkit/sping/util/HTMLPiddler.py RDKit_2014_03_1/rdkit/sping/util/__init__.py RDKit_2014_03_1/rdkit/sping/PS/ RDKit_2014_03_1/rdkit/sping/PS/pidPS.py RDKit_2014_03_1/rdkit/sping/PS/latin1MetricsCache.py RDKit_2014_03_1/rdkit/sping/PS/psmetrics.py RDKit_2014_03_1/rdkit/sping/PS/__init__.py RDKit_2014_03_1/rdkit/sping/PS/fontinfo.py RDKit_2014_03_1/rdkit/sping/TK/ RDKit_2014_03_1/rdkit/sping/TK/pidTK.py RDKit_2014_03_1/rdkit/sping/TK/__init__.py RDKit_2014_03_1/rdkit/sping/pagesizes.py RDKit_2014_03_1/rdkit/sping/PDF/ RDKit_2014_03_1/rdkit/sping/PDF/pdfutils.py RDKit_2014_03_1/rdkit/sping/PDF/pdfgeom.py RDKit_2014_03_1/rdkit/sping/PDF/pdfdoc.py RDKit_2014_03_1/rdkit/sping/PDF/__init__.py RDKit_2014_03_1/rdkit/sping/PDF/pdfmetrics.py RDKit_2014_03_1/rdkit/sping/PDF/pdfgen.py RDKit_2014_03_1/rdkit/sping/PDF/pidPDF.py RDKit_2014_03_1/rdkit/sping/Pyart/ RDKit_2014_03_1/rdkit/sping/Pyart/Fontmapping.py RDKit_2014_03_1/rdkit/sping/Pyart/pidPyart.py RDKit_2014_03_1/rdkit/sping/Pyart/__init__.py RDKit_2014_03_1/rdkit/sping/__init__.py RDKit_2014_03_1/rdkit/sping/pid.py RDKit_2014_03_1/rdkit/sping/examples/ RDKit_2014_03_1/rdkit/sping/examples/formatted-strings.py RDKit_2014_03_1/rdkit/sping/examples/tkCanvas-with-scrollbars.py RDKit_2014_03_1/rdkit/sping/examples/tkCanvasPIL-with-scrollbars.py RDKit_2014_03_1/rdkit/sping/utils.py RDKit_2014_03_1/rdkit/sping/PIL/ RDKit_2014_03_1/rdkit/sping/PIL/pidPIL.py RDKit_2014_03_1/rdkit/sping/PIL/__init__.py RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/ RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-10.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-14.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-14.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-12.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/metrics.dat RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-10.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-18.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-14.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-10.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-18.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-24.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-14.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-8.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-12.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-8.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-8.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-10.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-8.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-8.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-12.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-8.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-14.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-18.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-24.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-10.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-10.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-14.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-18.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-12.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/removemedium.py RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-24.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-24.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-10.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-8.pil.1 RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-24.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-14.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-14.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-10.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-24.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-12.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-18.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-8.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-18.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-8.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-24.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-8.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-18.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-12.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-12.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-12.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-12.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-18.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-12.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-10.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-8.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-18.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-10.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-8.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-14.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-18.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-8.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-12.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-14.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-18.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-18.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-24.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-14.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-18.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-8.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-24.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-24.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-24.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-bold-14.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/symbol-12.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-bold-24.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-12.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-bold-10.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/courier-10.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-24.pbm RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/helvetica-14.pil RDKit_2014_03_1/rdkit/sping/PIL/pilfonts/times-10.pil RDKit_2014_03_1/rdkit/sping/patches/ RDKit_2014_03_1/rdkit/sping/patches/Imaging-1.1-fixplugin-path RDKit_2014_03_1/rdkit/sping/patches/Imaging-1.1.1.diff RDKit_2014_03_1/rdkit/Avalon/ RDKit_2014_03_1/rdkit/Avalon/__init__.py RDKit_2014_03_1/rdkit/Logger/ RDKit_2014_03_1/rdkit/Logger/test_list.py RDKit_2014_03_1/rdkit/Logger/SpingDemo.py RDKit_2014_03_1/rdkit/Logger/Logger.py RDKit_2014_03_1/rdkit/Logger/__init__.py RDKit_2014_03_1/rdkit/Logger/UnitTestLogger.py RDKit_2014_03_1/rdkit/Logger/demo.py RDKit_2014_03_1/rdkit/utils/ RDKit_2014_03_1/rdkit/utils/chemdraw.py RDKit_2014_03_1/rdkit/utils/SliceTools.py RDKit_2014_03_1/rdkit/utils/12h.gif RDKit_2014_03_1/rdkit/utils/test1.gif RDKit_2014_03_1/rdkit/utils/spiral.py RDKit_2014_03_1/rdkit/utils/retest.txt RDKit_2014_03_1/rdkit/utils/comhack.py RDKit_2014_03_1/rdkit/utils/test3.gif RDKit_2014_03_1/rdkit/utils/fileutils.py RDKit_2014_03_1/rdkit/utils/cactvs.py RDKit_2014_03_1/rdkit/utils/REFile.py RDKit_2014_03_1/rdkit/utils/chemdraw_qax.py RDKit_2014_03_1/rdkit/utils/__init__.py RDKit_2014_03_1/rdkit/utils/Licensing.py RDKit_2014_03_1/rdkit/utils/GenLicense.py RDKit_2014_03_1/rdkit/utils/listutils.py RDKit_2014_03_1/rdkit/utils/test2.gif RDKit_2014_03_1/rdkit/utils/chemutils.py RDKit_2014_03_1/rdkit/utils/GUIDs.py RDKit_2014_03_1/rdkit/utils/PiddleTools.py RDKit_2014_03_1/rdkit/utils/PilTools.py RDKit_2014_03_1/rdkit/Dbase/ RDKit_2014_03_1/rdkit/Dbase/StorageUtils.py RDKit_2014_03_1/rdkit/Dbase/test_list.py RDKit_2014_03_1/rdkit/Dbase/DbConnection.py RDKit_2014_03_1/rdkit/Dbase/UnitTestDbResultSet.py RDKit_2014_03_1/rdkit/Dbase/UnitTestDbUtils.py RDKit_2014_03_1/rdkit/Dbase/Pubmed/ RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_list.py RDKit_2014_03_1/rdkit/Dbase/Pubmed/QueryParams.py RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/ RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/haslinks.xml RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/encoding_author_record.xml RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/links.xml RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/nohits.xml RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/search.xml RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/links.both.xml RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/counts.xml RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/records.xml RDKit_2014_03_1/rdkit/Dbase/Pubmed/test_data/summary.xml RDKit_2014_03_1/rdkit/Dbase/Pubmed/PubmedUtils.py RDKit_2014_03_1/rdkit/Dbase/Pubmed/__init__.py RDKit_2014_03_1/rdkit/Dbase/Pubmed/Records.py RDKit_2014_03_1/rdkit/Dbase/Pubmed/Searches.py RDKit_2014_03_1/rdkit/Dbase/UnitTestDbConnect.py RDKit_2014_03_1/rdkit/Dbase/test_data/ RDKit_2014_03_1/rdkit/Dbase/test_data/RDData.psql RDKit_2014_03_1/rdkit/Dbase/test_data/dbtest.csv RDKit_2014_03_1/rdkit/Dbase/test_data/dbtest.nulls.csv RDKit_2014_03_1/rdkit/Dbase/test_data/dbtest.xls RDKit_2014_03_1/rdkit/Dbase/test_data/RDData.sqlite RDKit_2014_03_1/rdkit/Dbase/test_data/dbtest.nulls.xls RDKit_2014_03_1/rdkit/Dbase/test_data/rdtest.sql RDKit_2014_03_1/rdkit/Dbase/test_data/RDTests.psql RDKit_2014_03_1/rdkit/Dbase/test_data/RDTests.sqlite RDKit_2014_03_1/rdkit/Dbase/DbModule.py RDKit_2014_03_1/rdkit/Dbase/DbResultSet.py RDKit_2014_03_1/rdkit/Dbase/DbReport.py RDKit_2014_03_1/rdkit/Dbase/DbInfo.py RDKit_2014_03_1/rdkit/Dbase/__init__.py RDKit_2014_03_1/rdkit/Dbase/DbUtils.py RDKit_2014_03_1/rdkit/DistanceGeometry/ RDKit_2014_03_1/rdkit/DistanceGeometry/__init__.py RDKit_2014_03_1/rdkit/RDLogger.py RDKit_2014_03_1/rdkit/Numerics/ RDKit_2014_03_1/rdkit/Numerics/__init__.py RDKit_2014_03_1/rdkit/CMakeLists.txt RDKit_2014_03_1/rdkit/ForceField/ RDKit_2014_03_1/rdkit/ForceField/__init__.py RDKit_2014_03_1/rdkit/VLib/ RDKit_2014_03_1/rdkit/VLib/test_list.py RDKit_2014_03_1/rdkit/VLib/NodeLib/ RDKit_2014_03_1/rdkit/VLib/NodeLib/test_list.py RDKit_2014_03_1/rdkit/VLib/NodeLib/DbPickleSupplier.py RDKit_2014_03_1/rdkit/VLib/NodeLib/DbMolSupply.py RDKit_2014_03_1/rdkit/VLib/NodeLib/test_data/ RDKit_2014_03_1/rdkit/VLib/NodeLib/test_data/NCI_aids.10.sdf RDKit_2014_03_1/rdkit/VLib/NodeLib/test_data/NCI_aids.10.dupes.sdf RDKit_2014_03_1/rdkit/VLib/NodeLib/test_data/pgp_20.txt RDKit_2014_03_1/rdkit/VLib/NodeLib/SmilesDupeFilter.py RDKit_2014_03_1/rdkit/VLib/NodeLib/SmartsMolFilter.py RDKit_2014_03_1/rdkit/VLib/NodeLib/SmilesOutput.py RDKit_2014_03_1/rdkit/VLib/NodeLib/SDSupply.py RDKit_2014_03_1/rdkit/VLib/NodeLib/__init__.py RDKit_2014_03_1/rdkit/VLib/NodeLib/demo.py RDKit_2014_03_1/rdkit/VLib/NodeLib/SmilesSupply.py RDKit_2014_03_1/rdkit/VLib/NodeLib/SmartsRemover.py RDKit_2014_03_1/rdkit/VLib/Node.py RDKit_2014_03_1/rdkit/VLib/Filter.py RDKit_2014_03_1/rdkit/VLib/Output.py RDKit_2014_03_1/rdkit/VLib/__init__.py RDKit_2014_03_1/rdkit/VLib/Supply.py RDKit_2014_03_1/rdkit/VLib/Transform.py RDKit_2014_03_1/rdkit/RDConfig.py RDKit_2014_03_1/rdkit/__init__.py RDKit_2014_03_1/rdkit/Chem/ RDKit_2014_03_1/rdkit/Chem/Graphs.py RDKit_2014_03_1/rdkit/Chem/FragmentCatalog.py RDKit_2014_03_1/rdkit/Chem/TemplateAlign.py RDKit_2014_03_1/rdkit/Chem/UnitTestInchi.py RDKit_2014_03_1/rdkit/Chem/test_list.py RDKit_2014_03_1/rdkit/Chem/MolDb/ RDKit_2014_03_1/rdkit/Chem/MolDb/Loader.py RDKit_2014_03_1/rdkit/Chem/MolDb/Loader_sa.py RDKit_2014_03_1/rdkit/Chem/MolDb/FingerprintUtils.py RDKit_2014_03_1/rdkit/Chem/MolDb/Loader_orig.py RDKit_2014_03_1/rdkit/Chem/MolDb/__init__.py RDKit_2014_03_1/rdkit/Chem/Pharm3D/ RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_list.py RDKit_2014_03_1/rdkit/Chem/Pharm3D/UnitTestEmbed.py RDKit_2014_03_1/rdkit/Chem/Pharm3D/EmbedLib.py RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/ RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/cdk2-syn-clip100.pkl.gz RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/Issue268.fdef RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/mol-s-3.mol RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/Issue268_Mol2.mol RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/BaseFeatures.fdef RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/mol-r-3.mol RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/mol-r.mol RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/Issue268_Pcop.pkl RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/mol-s.mol RDKit_2014_03_1/rdkit/Chem/Pharm3D/test_data/Issue268_Mol1.mol RDKit_2014_03_1/rdkit/Chem/Pharm3D/Pharmacophore.py RDKit_2014_03_1/rdkit/Chem/Pharm3D/__init__.py RDKit_2014_03_1/rdkit/Chem/Pharm3D/ExcludedVolume.py RDKit_2014_03_1/rdkit/Chem/Pharm3D/UnitTestPharmacophore.py RDKit_2014_03_1/rdkit/Chem/UnitTestChemSmarts.py RDKit_2014_03_1/rdkit/Chem/UnitTestOldBugs.py RDKit_2014_03_1/rdkit/Chem/UnitTestChemAtom.py RDKit_2014_03_1/rdkit/Chem/MolSurf.py RDKit_2014_03_1/rdkit/Chem/UnitTestFunctionalGroups.py RDKit_2014_03_1/rdkit/Chem/Scaffolds/ RDKit_2014_03_1/rdkit/Chem/Scaffolds/test_list.py RDKit_2014_03_1/rdkit/Chem/Scaffolds/test_MurckoScaffold.py RDKit_2014_03_1/rdkit/Chem/Scaffolds/MurckoScaffold.py RDKit_2014_03_1/rdkit/Chem/Scaffolds/__init__.py RDKit_2014_03_1/rdkit/Chem/UnitTestChemv2.py RDKit_2014_03_1/rdkit/Chem/Fingerprints/ RDKit_2014_03_1/rdkit/Chem/Fingerprints/test_list.py RDKit_2014_03_1/rdkit/Chem/Fingerprints/ClusterMols.py RDKit_2014_03_1/rdkit/Chem/Fingerprints/FingerprintMols.py RDKit_2014_03_1/rdkit/Chem/Fingerprints/UnitTestFingerprints.py RDKit_2014_03_1/rdkit/Chem/Fingerprints/MolSimilarity.py RDKit_2014_03_1/rdkit/Chem/Fingerprints/UnitTestSimScreener.py RDKit_2014_03_1/rdkit/Chem/Fingerprints/__init__.py RDKit_2014_03_1/rdkit/Chem/Fingerprints/DbFpSupplier.py RDKit_2014_03_1/rdkit/Chem/Fingerprints/SimilarityScreener.py RDKit_2014_03_1/rdkit/Chem/UnitTestChemBond.py RDKit_2014_03_1/rdkit/Chem/PeriodicTable.py RDKit_2014_03_1/rdkit/Chem/UnitTestLipinski.py RDKit_2014_03_1/rdkit/Chem/AllChem.py RDKit_2014_03_1/rdkit/Chem/ChemicalFeatures.py RDKit_2014_03_1/rdkit/Chem/PandasTools.py RDKit_2014_03_1/rdkit/Chem/Fragments.py RDKit_2014_03_1/rdkit/Chem/test_data/ RDKit_2014_03_1/rdkit/Chem/test_data/benzene.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/multi-center.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/simple_catalog.pkl RDKit_2014_03_1/rdkit/Chem/test_data/bond-query.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/MQNs_regress.pkl RDKit_2014_03_1/rdkit/Chem/test_data/BuildDescrsTestSet.py RDKit_2014_03_1/rdkit/Chem/test_data/ferrocene.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/BuildCrippenTestSet.py RDKit_2014_03_1/rdkit/Chem/test_data/PP_descrs_regress.rest.2.csv RDKit_2014_03_1/rdkit/Chem/test_data/dative.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/buildingblocks.smi.gz RDKit_2014_03_1/rdkit/Chem/test_data/pubchem-hard-set.inchi RDKit_2014_03_1/rdkit/Chem/test_data/NCI_5K_TPSA.csv RDKit_2014_03_1/rdkit/Chem/test_data/sandwich.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/linear.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/PP_descrs_regress.VSA.2.csv RDKit_2014_03_1/rdkit/Chem/test_data/PP_descrs_regress.csv RDKit_2014_03_1/rdkit/Chem/test_data/NCI_aromat_regress.txt RDKit_2014_03_1/rdkit/Chem/test_data/NCI_regress.Lip.csv RDKit_2014_03_1/rdkit/Chem/test_data/lin.xml RDKit_2014_03_1/rdkit/Chem/test_data/Ti-sandwich.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/Crippen.csv RDKit_2014_03_1/rdkit/Chem/test_data/github112_qry.mol RDKit_2014_03_1/rdkit/Chem/test_data/quilt.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/Crippen_contribs_regress.2.pkl RDKit_2014_03_1/rdkit/Chem/test_data/fused-fours.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/quilt.sm.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/Fe-multi-center.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/benzene.mol RDKit_2014_03_1/rdkit/Chem/test_data/PP_descrs_regress.2.csv RDKit_2014_03_1/rdkit/Chem/test_data/4DJU_lig.pdb RDKit_2014_03_1/rdkit/Chem/test_data/cubane.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/napthalene.mol RDKit_2014_03_1/rdkit/Chem/test_data/pubchem-hard-set.sdf.gz RDKit_2014_03_1/rdkit/Chem/test_data/Cp-.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/github112_tgt.mol RDKit_2014_03_1/rdkit/Chem/test_data/PP_descrs_regress.VSA.csv RDKit_2014_03_1/rdkit/Chem/test_data/anthracene.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/Block_regress.Lip.csv RDKit_2014_03_1/rdkit/Chem/test_data/t.xml RDKit_2014_03_1/rdkit/Chem/test_data/tpsa_regr.csv RDKit_2014_03_1/rdkit/Chem/test_data/multi-ring.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/quinone.mol RDKit_2014_03_1/rdkit/Chem/test_data/Crippen_contribs_regress.pkl RDKit_2014_03_1/rdkit/Chem/test_data/dative.mol RDKit_2014_03_1/rdkit/Chem/test_data/monomer.mol RDKit_2014_03_1/rdkit/Chem/test_data/BuildDescrsTestSet.Crippen.py RDKit_2014_03_1/rdkit/Chem/test_data/atom-query.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/aromat_regress.txt RDKit_2014_03_1/rdkit/Chem/test_data/linear.mol RDKit_2014_03_1/rdkit/Chem/test_data/napthalene.cdxml RDKit_2014_03_1/rdkit/Chem/test_data/4FTR_lig.mol RDKit_2014_03_1/rdkit/Chem/DSViewer.py RDKit_2014_03_1/rdkit/Chem/UnitTestGraphDescriptors.2.py RDKit_2014_03_1/rdkit/Chem/Lipinski.py RDKit_2014_03_1/rdkit/Chem/Recap.py RDKit_2014_03_1/rdkit/Chem/Crippen.py RDKit_2014_03_1/rdkit/Chem/GraphDescriptors.py RDKit_2014_03_1/rdkit/Chem/Subshape/ RDKit_2014_03_1/rdkit/Chem/Subshape/test_list.py RDKit_2014_03_1/rdkit/Chem/Subshape/SubshapeAligner.py RDKit_2014_03_1/rdkit/Chem/Subshape/UnitTestSubshape.py RDKit_2014_03_1/rdkit/Chem/Subshape/test_data/ RDKit_2014_03_1/rdkit/Chem/Subshape/test_data/5ht3_mol1.shp.pkl RDKit_2014_03_1/rdkit/Chem/Subshape/test_data/square2.mol RDKit_2014_03_1/rdkit/Chem/Subshape/test_data/square1.mol RDKit_2014_03_1/rdkit/Chem/Subshape/test_data/5ht3_mol2.shp.pkl RDKit_2014_03_1/rdkit/Chem/Subshape/test_data/5ht3ligs.sdf RDKit_2014_03_1/rdkit/Chem/Subshape/SubshapeObjects.py RDKit_2014_03_1/rdkit/Chem/Subshape/__init__.py RDKit_2014_03_1/rdkit/Chem/Subshape/testCombined.py RDKit_2014_03_1/rdkit/Chem/Subshape/SubshapeBuilder.py RDKit_2014_03_1/rdkit/Chem/Subshape/BuilderUtils.py RDKit_2014_03_1/rdkit/Chem/Descriptors.py RDKit_2014_03_1/rdkit/Chem/BuildFragmentCatalog.py RDKit_2014_03_1/rdkit/Chem/FeatMaps/ RDKit_2014_03_1/rdkit/Chem/FeatMaps/test_list.py RDKit_2014_03_1/rdkit/Chem/FeatMaps/UnitTestFeatMap.py RDKit_2014_03_1/rdkit/Chem/FeatMaps/FeatMapUtils.py RDKit_2014_03_1/rdkit/Chem/FeatMaps/FeatMaps.py RDKit_2014_03_1/rdkit/Chem/FeatMaps/FeatMapParser.py RDKit_2014_03_1/rdkit/Chem/FeatMaps/UnitTestFeatMapParser.py RDKit_2014_03_1/rdkit/Chem/FeatMaps/__init__.py RDKit_2014_03_1/rdkit/Chem/FeatMaps/FeatMapPoint.py RDKit_2014_03_1/rdkit/Chem/FeatMaps/UnitTestFeatMapUtils.py RDKit_2014_03_1/rdkit/Chem/MACCSkeys.py RDKit_2014_03_1/rdkit/Chem/FeatFinderCLI.py RDKit_2014_03_1/rdkit/Chem/fmcs/ RDKit_2014_03_1/rdkit/Chem/fmcs/fmcs RDKit_2014_03_1/rdkit/Chem/fmcs/fmcs.py RDKit_2014_03_1/rdkit/Chem/fmcs/__init__.py RDKit_2014_03_1/rdkit/Chem/Draw/ RDKit_2014_03_1/rdkit/Chem/Draw/test_list.py RDKit_2014_03_1/rdkit/Chem/Draw/cairoCanvas.py RDKit_2014_03_1/rdkit/Chem/Draw/mplCanvas.py RDKit_2014_03_1/rdkit/Chem/Draw/SimilarityMaps.py RDKit_2014_03_1/rdkit/Chem/Draw/canvasbase.py RDKit_2014_03_1/rdkit/Chem/Draw/aggCanvas.py RDKit_2014_03_1/rdkit/Chem/Draw/__init__.py RDKit_2014_03_1/rdkit/Chem/Draw/UnitTestDraw.py RDKit_2014_03_1/rdkit/Chem/Draw/UnitTestSimilarityMaps.py RDKit_2014_03_1/rdkit/Chem/Draw/MolDrawing.py RDKit_2014_03_1/rdkit/Chem/Draw/spingCanvas.py RDKit_2014_03_1/rdkit/Chem/Draw/IPythonConsole.py RDKit_2014_03_1/rdkit/Chem/Draw/FreeSans.ttf RDKit_2014_03_1/rdkit/Chem/ChemUtils/ RDKit_2014_03_1/rdkit/Chem/ChemUtils/test_list.py RDKit_2014_03_1/rdkit/Chem/ChemUtils/TemplateExpand.py RDKit_2014_03_1/rdkit/Chem/ChemUtils/BulkTester.py RDKit_2014_03_1/rdkit/Chem/ChemUtils/AlignDepict.py RDKit_2014_03_1/rdkit/Chem/ChemUtils/__init__.py RDKit_2014_03_1/rdkit/Chem/ChemUtils/SDFToCSV.py RDKit_2014_03_1/rdkit/Chem/SATIS.py RDKit_2014_03_1/rdkit/Chem/PyMol.py RDKit_2014_03_1/rdkit/Chem/ChemicalForceFields.py RDKit_2014_03_1/rdkit/Chem/Features/ RDKit_2014_03_1/rdkit/Chem/Features/FeatDirUtilsRD.py RDKit_2014_03_1/rdkit/Chem/Features/ShowFeats.py RDKit_2014_03_1/rdkit/Chem/Features/__init__.py RDKit_2014_03_1/rdkit/Chem/EState/ RDKit_2014_03_1/rdkit/Chem/EState/test_list.py RDKit_2014_03_1/rdkit/Chem/EState/UnitTestVSA.py RDKit_2014_03_1/rdkit/Chem/EState/test_data/ RDKit_2014_03_1/rdkit/Chem/EState/test_data/EState_VSA.csv RDKit_2014_03_1/rdkit/Chem/EState/UnitTestFingerprints.py RDKit_2014_03_1/rdkit/Chem/EState/AtomTypes.py RDKit_2014_03_1/rdkit/Chem/EState/__init__.py RDKit_2014_03_1/rdkit/Chem/EState/UnitTestEState.py RDKit_2014_03_1/rdkit/Chem/EState/UnitTestTypes.py RDKit_2014_03_1/rdkit/Chem/EState/Fingerprinter.py RDKit_2014_03_1/rdkit/Chem/EState/EState_VSA.py RDKit_2014_03_1/rdkit/Chem/EState/EState.py RDKit_2014_03_1/rdkit/Chem/Fraggle/ RDKit_2014_03_1/rdkit/Chem/Fraggle/test_list.py RDKit_2014_03_1/rdkit/Chem/Fraggle/UnitTestFraggle.py RDKit_2014_03_1/rdkit/Chem/Fraggle/FraggleSim.py RDKit_2014_03_1/rdkit/Chem/Fraggle/__init__.py RDKit_2014_03_1/rdkit/Chem/UnitTestSuppliers.py RDKit_2014_03_1/rdkit/Chem/UnitTestFragmentDescriptors.py RDKit_2014_03_1/rdkit/Chem/UnitTestCrippen.py RDKit_2014_03_1/rdkit/Chem/UnitTestDescriptors.py RDKit_2014_03_1/rdkit/Chem/Suppliers/ RDKit_2014_03_1/rdkit/Chem/Suppliers/test_list.py RDKit_2014_03_1/rdkit/Chem/Suppliers/DbMolSupplier.py RDKit_2014_03_1/rdkit/Chem/Suppliers/UnitTestSmilesMolSupplier.py RDKit_2014_03_1/rdkit/Chem/Suppliers/MolSupplier.py RDKit_2014_03_1/rdkit/Chem/Suppliers/UnitTestSDMolSupplier.py RDKit_2014_03_1/rdkit/Chem/Suppliers/__init__.py RDKit_2014_03_1/rdkit/Chem/SaltRemover.py RDKit_2014_03_1/rdkit/Chem/BRICS.py RDKit_2014_03_1/rdkit/Chem/FunctionalGroups.py RDKit_2014_03_1/rdkit/Chem/__init__.py RDKit_2014_03_1/rdkit/Chem/UnitTestSurf.py RDKit_2014_03_1/rdkit/Chem/UnitTestChem.py RDKit_2014_03_1/rdkit/Chem/AtomPairs/ RDKit_2014_03_1/rdkit/Chem/AtomPairs/test_list.py RDKit_2014_03_1/rdkit/Chem/AtomPairs/Utils.py RDKit_2014_03_1/rdkit/Chem/AtomPairs/test_data/ RDKit_2014_03_1/rdkit/Chem/AtomPairs/test_data/mols1000.aps.pkl.gz RDKit_2014_03_1/rdkit/Chem/AtomPairs/test_data/mols1000.tts.pkl.gz RDKit_2014_03_1/rdkit/Chem/AtomPairs/test_data/mols1000.pkl.gz RDKit_2014_03_1/rdkit/Chem/AtomPairs/Torsions.py RDKit_2014_03_1/rdkit/Chem/AtomPairs/UnitTestDescriptors.py RDKit_2014_03_1/rdkit/Chem/AtomPairs/Pairs.py RDKit_2014_03_1/rdkit/Chem/AtomPairs/__init__.py RDKit_2014_03_1/rdkit/Chem/UnitTestArom.py RDKit_2014_03_1/rdkit/Chem/UnitTestSATIS.py RDKit_2014_03_1/rdkit/Chem/MolCatalog.py RDKit_2014_03_1/rdkit/Chem/FastSDMolSupplier.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/ RDKit_2014_03_1/rdkit/Chem/Pharm2D/test_list.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/SigFactory.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/Utils.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/UnitTestUtils.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/Generate.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/test_data/ RDKit_2014_03_1/rdkit/Chem/Pharm2D/test_data/orderBug.sdf RDKit_2014_03_1/rdkit/Chem/Pharm2D/test_data/BaseFeatures.fdef RDKit_2014_03_1/rdkit/Chem/Pharm2D/Matcher.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/UnitTestSignature.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/Gobbi_Pharm2D.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/UnitTestMatcher.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/LazyGenerator.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/__init__.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/UnitTestGobbi.py RDKit_2014_03_1/rdkit/Chem/Pharm2D/UnitTestLazyGenerator.py RDKit_2014_03_1/rdkit/Chem/PropertyMol.py RDKit_2014_03_1/rdkit/Chem/MCS.py RDKit_2014_03_1/rdkit/Chem/UnitTestSmiles.py RDKit_2014_03_1/rdkit/Chem/ShowMols.py RDKit_2014_03_1/rdkit/Chem/Randomize.py RDKit_2014_03_1/rdkit/Chem/UnitTestCatalog.py RDKit_2014_03_1/rdkit/Chem/UnitTestMCS.py RDKit_2014_03_1/rdkit/Chem/FragmentMatcher.py RDKit_2014_03_1/rdkit/Chem/SimpleEnum/ RDKit_2014_03_1/rdkit/Chem/SimpleEnum/test_list.py RDKit_2014_03_1/rdkit/Chem/SimpleEnum/Enumerator.py RDKit_2014_03_1/rdkit/Chem/SimpleEnum/test_data/ RDKit_2014_03_1/rdkit/Chem/SimpleEnum/test_data/bad_value1.rxn RDKit_2014_03_1/rdkit/Chem/SimpleEnum/test_data/boronic1.rxn RDKit_2014_03_1/rdkit/Chem/SimpleEnum/test_data/bad_value3.rxn RDKit_2014_03_1/rdkit/Chem/SimpleEnum/test_data/azide_reaction.rxn RDKit_2014_03_1/rdkit/Chem/SimpleEnum/test_data/bad_value2.rxn RDKit_2014_03_1/rdkit/Chem/SimpleEnum/__init__.py RDKit_2014_03_1/rdkit/epydoc.config RDKit_2014_03_1/rdkit/SimDivFilters/ RDKit_2014_03_1/rdkit/SimDivFilters/test_list.py RDKit_2014_03_1/rdkit/SimDivFilters/test_data/ RDKit_2014_03_1/rdkit/SimDivFilters/test_data/genfps.py RDKit_2014_03_1/rdkit/SimDivFilters/__init__.py RDKit_2014_03_1/rdkit/SimDivFilters/SimilarityPickers.py RDKit_2014_03_1/rdkit/Geometry/ RDKit_2014_03_1/rdkit/Geometry/__init__.py RDKit_2014_03_1/rdkit/TestRunner.py RDKit_2014_03_1/INSTALL RDKit_2014_03_1/Scripts/ RDKit_2014_03_1/Scripts/AddIssue.py RDKit_2014_03_1/Scripts/MailResults.py RDKit_2014_03_1/Scripts/NightlyBuildAndTest.sh RDKit_2014_03_1/rdkit-config.cmake.in RDKit_2014_03_1/Code/ RDKit_2014_03_1/Code/test_list.py RDKit_2014_03_1/Code/PgSQL/ RDKit_2014_03_1/Code/PgSQL/rdkit/ RDKit_2014_03_1/Code/PgSQL/rdkit/data/ RDKit_2014_03_1/Code/PgSQL/rdkit/data/data RDKit_2014_03_1/Code/PgSQL/rdkit/uninstall_rdkit.sql RDKit_2014_03_1/Code/PgSQL/rdkit/cache.c RDKit_2014_03_1/Code/PgSQL/rdkit/README RDKit_2014_03_1/Code/PgSQL/rdkit/adapter.cpp RDKit_2014_03_1/Code/PgSQL/rdkit/rdkit.control RDKit_2014_03_1/Code/PgSQL/rdkit/sql/ RDKit_2014_03_1/Code/PgSQL/rdkit/sql/sfpgist.sql RDKit_2014_03_1/Code/PgSQL/rdkit/sql/rdkit-pre91.sql RDKit_2014_03_1/Code/PgSQL/rdkit/sql/molgist.sql RDKit_2014_03_1/Code/PgSQL/rdkit/sql/btree.sql 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RDKit_2014_03_1/Code/DataStructs/BitVect.h RDKit_2014_03_1/Code/DataStructs/testDatastructs.cpp RDKit_2014_03_1/Code/DataStructs/ExplicitBitVect.cpp RDKit_2014_03_1/Code/DataStructs/BitOps.cpp RDKit_2014_03_1/Code/DataStructs/SparseBitVect.cpp RDKit_2014_03_1/Code/DataStructs/DiscreteDistMat.h RDKit_2014_03_1/Code/DataStructs/BitVectUtils.h RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.h RDKit_2014_03_1/Code/DistGeom/ RDKit_2014_03_1/Code/DistGeom/ChiralViolationContrib.cpp RDKit_2014_03_1/Code/DistGeom/test_list.py RDKit_2014_03_1/Code/DistGeom/DistGeomUtils.cpp RDKit_2014_03_1/Code/DistGeom/testDistGeom.cpp RDKit_2014_03_1/Code/DistGeom/Wrap/ RDKit_2014_03_1/Code/DistGeom/Wrap/test_list.py RDKit_2014_03_1/Code/DistGeom/Wrap/DistGeom.cpp RDKit_2014_03_1/Code/DistGeom/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/DistGeom/Wrap/rough_test.py RDKit_2014_03_1/Code/DistGeom/ChiralViolationContrib.h RDKit_2014_03_1/Code/DistGeom/DistViolationContrib.h 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RDKit_2014_03_1/Code/DataManip/MetricMatrixCalc/MetricFuncs.h RDKit_2014_03_1/Code/DataManip/CMakeLists.txt RDKit_2014_03_1/Code/ChemicalFeatures/ RDKit_2014_03_1/Code/ChemicalFeatures/test_list.py RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/ RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/test_list.py RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/testData/ RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/testData/feat.pkl RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/testData/featv2.pkl RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/testFeatures.py RDKit_2014_03_1/Code/ChemicalFeatures/testChemicalFeatures.cpp RDKit_2014_03_1/Code/ChemicalFeatures/ChemicalFeature.h RDKit_2014_03_1/Code/ChemicalFeatures/FreeChemicalFeature.h RDKit_2014_03_1/Code/ChemicalFeatures/FreeChemicalFeature.cpp RDKit_2014_03_1/Code/ChemicalFeatures/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/ RDKit_2014_03_1/Code/GraphMol/test_list.py RDKit_2014_03_1/Code/GraphMol/ROMol.cpp RDKit_2014_03_1/Code/GraphMol/SanitException.h RDKit_2014_03_1/Code/GraphMol/SmilesParse/ RDKit_2014_03_1/Code/GraphMol/SmilesParse/lex.yysmiles.cpp.cmake RDKit_2014_03_1/Code/GraphMol/SmilesParse/test_list.py RDKit_2014_03_1/Code/GraphMol/SmilesParse/esmiles.y RDKit_2014_03_1/Code/GraphMol/SmilesParse/smamain.cpp RDKit_2014_03_1/Code/GraphMol/SmilesParse/esmiles.flex RDKit_2014_03_1/Code/GraphMol/SmilesParse/runflex.sh RDKit_2014_03_1/Code/GraphMol/SmilesParse/smarts.tab.hpp.cmake RDKit_2014_03_1/Code/GraphMol/SmilesParse/primes.h RDKit_2014_03_1/Code/GraphMol/SmilesParse/smiles.tab.hpp.cmake RDKit_2014_03_1/Code/GraphMol/SmilesParse/smiles.tab.cpp.cmake RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesParseOps.cpp RDKit_2014_03_1/Code/GraphMol/SmilesParse/smarts.ll RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesParse.h RDKit_2014_03_1/Code/GraphMol/SmilesParse/testExecs/ RDKit_2014_03_1/Code/GraphMol/SmilesParse/testExecs/.cvskeep RDKit_2014_03_1/Code/GraphMol/SmilesParse/smiles.ll RDKit_2014_03_1/Code/GraphMol/SmilesParse/smarts.yy RDKit_2014_03_1/Code/GraphMol/SmilesParse/test.cpp RDKit_2014_03_1/Code/GraphMol/SmilesParse/smarts.tab.cpp.cmake RDKit_2014_03_1/Code/GraphMol/SmilesParse/lex.yysmarts.cpp.cmake RDKit_2014_03_1/Code/GraphMol/SmilesParse/smiles.yy RDKit_2014_03_1/Code/GraphMol/SmilesParse/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesParse.cpp RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesParseOps.h RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmartsWrite.h RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmartsWrite.cpp RDKit_2014_03_1/Code/GraphMol/SmilesParse/main.cpp RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesWrite.cpp RDKit_2014_03_1/Code/GraphMol/SmilesParse/smatest.cpp RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesWrite.h RDKit_2014_03_1/Code/GraphMol/SmilesParse/regress.txt RDKit_2014_03_1/Code/GraphMol/MolDiscriminators.cpp RDKit_2014_03_1/Code/GraphMol/Substruct/ RDKit_2014_03_1/Code/GraphMol/Substruct/test_list.py RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructMatch.cpp RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructUtils.h RDKit_2014_03_1/Code/GraphMol/Substruct/bond-query.cdxml RDKit_2014_03_1/Code/GraphMol/Substruct/list-query.cdxml RDKit_2014_03_1/Code/GraphMol/Substruct/bench.cpp RDKit_2014_03_1/Code/GraphMol/Substruct/ullmann.hpp RDKit_2014_03_1/Code/GraphMol/Substruct/testExecs/ RDKit_2014_03_1/Code/GraphMol/Substruct/testExecs/.cvskeep RDKit_2014_03_1/Code/GraphMol/Substruct/UnitTestSubstruct.py RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructUtils.cpp RDKit_2014_03_1/Code/GraphMol/Substruct/cmd_match.cpp RDKit_2014_03_1/Code/GraphMol/Substruct/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructMatch.h RDKit_2014_03_1/Code/GraphMol/Substruct/test1.cpp RDKit_2014_03_1/Code/GraphMol/Substruct/vf2.hpp RDKit_2014_03_1/Code/GraphMol/Substruct/regress.txt RDKit_2014_03_1/Code/GraphMol/Chirality.cpp RDKit_2014_03_1/Code/GraphMol/Subgraphs/ RDKit_2014_03_1/Code/GraphMol/Subgraphs/test_list.py RDKit_2014_03_1/Code/GraphMol/Subgraphs/test2.cpp RDKit_2014_03_1/Code/GraphMol/Subgraphs/SubgraphUtils.cpp RDKit_2014_03_1/Code/GraphMol/Subgraphs/Subgraphs.h RDKit_2014_03_1/Code/GraphMol/Subgraphs/testExecs/ RDKit_2014_03_1/Code/GraphMol/Subgraphs/testExecs/.cvskeep RDKit_2014_03_1/Code/GraphMol/Subgraphs/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/Subgraphs/Subgraphs.cpp RDKit_2014_03_1/Code/GraphMol/Subgraphs/test1.cpp RDKit_2014_03_1/Code/GraphMol/Subgraphs/SubgraphUtils.h RDKit_2014_03_1/Code/GraphMol/RankAtoms.h RDKit_2014_03_1/Code/GraphMol/PeriodicTable.cpp RDKit_2014_03_1/Code/GraphMol/libs/ RDKit_2014_03_1/Code/GraphMol/libs/.cvskeep RDKit_2014_03_1/Code/GraphMol/MolOps.h RDKit_2014_03_1/Code/GraphMol/BondIterators.cpp 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RDKit_2014_03_1/Code/GraphMol/Wrap/Conformer.cpp RDKit_2014_03_1/Code/GraphMol/Wrap/RingInfo.cpp RDKit_2014_03_1/Code/GraphMol/Wrap/testConformer.py RDKit_2014_03_1/Code/GraphMol/Wrap/rdmolfiles.cpp RDKit_2014_03_1/Code/GraphMol/Wrap/rdmolops.h RDKit_2014_03_1/Code/GraphMol/RDKitQueries.h RDKit_2014_03_1/Code/GraphMol/Rings.h RDKit_2014_03_1/Code/GraphMol/Renumber.cpp RDKit_2014_03_1/Code/GraphMol/Conformer.h RDKit_2014_03_1/Code/GraphMol/FileParsers/ RDKit_2014_03_1/Code/GraphMol/FileParsers/ProximityBonds.cpp RDKit_2014_03_1/Code/GraphMol/FileParsers/test_list.py RDKit_2014_03_1/Code/GraphMol/FileParsers/TDTWriter.cpp RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParserUtils.h RDKit_2014_03_1/Code/GraphMol/FileParsers/SDMolSupplier.cpp RDKit_2014_03_1/Code/GraphMol/FileParsers/PDBParser.cpp RDKit_2014_03_1/Code/GraphMol/FileParsers/testMolSupplier.cpp RDKit_2014_03_1/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileStereochem.h RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileParser.cpp RDKit_2014_03_1/Code/GraphMol/FileParsers/TDTMolSupplier.cpp RDKit_2014_03_1/Code/GraphMol/FileParsers/ProximityBonds.h RDKit_2014_03_1/Code/GraphMol/FileParsers/testExecs/ RDKit_2014_03_1/Code/GraphMol/FileParsers/testExecs/.cvskeep RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/ RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/AtomProps1.mol RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/missingCR.sdf RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/cmpd1.tpl RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/earlyEOF.sdf RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/ChiralityAndBondDir1b.mol RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/v3k.4b.mol RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/sdErrors4.sdf RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/dbtranslateUnchargedRing.mol2 RDKit_2014_03_1/Code/GraphMol/FileParsers/test_data/ringcount_star2.mol 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RDKit_2014_03_1/Code/GraphMol/Depictor/DepictUtils.h RDKit_2014_03_1/Code/GraphMol/AtomIterators.cpp RDKit_2014_03_1/Code/GraphMol/QueryBond.h RDKit_2014_03_1/Code/GraphMol/GraphMol.h RDKit_2014_03_1/Code/GraphMol/cptest.cpp RDKit_2014_03_1/Code/GraphMol/GraphMol.cpp RDKit_2014_03_1/Code/GraphMol/Basement/ RDKit_2014_03_1/Code/GraphMol/Basement/FeatTrees/ RDKit_2014_03_1/Code/GraphMol/Basement/FeatTrees/FeatTree.cpp RDKit_2014_03_1/Code/GraphMol/Basement/FeatTrees/FeatTreeUtils.h RDKit_2014_03_1/Code/GraphMol/Basement/FeatTrees/FeatTree.h RDKit_2014_03_1/Code/GraphMol/Basement/FeatTrees/testFeatTrees.cpp RDKit_2014_03_1/Code/GraphMol/Basement/FeatTrees/FeatTreeUtils.cpp RDKit_2014_03_1/Code/GraphMol/RingInfo.h RDKit_2014_03_1/Code/GraphMol/AddHs.cpp RDKit_2014_03_1/Code/GraphMol/Canon.h RDKit_2014_03_1/Code/GraphMol/MolPickler.cpp RDKit_2014_03_1/Code/GraphMol/MonomerInfo.h RDKit_2014_03_1/Code/GraphMol/PartialCharges/ RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/ RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/test_list.py RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/testPartialCharges.py RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/test_data/ RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/test_data/halgren.smi RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/test_data/PP_descrs_regress.2.csv RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/test_data/halgren_out.txt RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/test_data/PP_combi_charges.pkl RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/PartialCharges/GasteigerParams.cpp RDKit_2014_03_1/Code/GraphMol/PartialCharges/GasteigerCharges.cpp RDKit_2014_03_1/Code/GraphMol/PartialCharges/GasteigerParams.h RDKit_2014_03_1/Code/GraphMol/PartialCharges/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/PartialCharges/GasteigerCharges.h RDKit_2014_03_1/Code/GraphMol/ROMol.h RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/test_list.py RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/Wrap/ RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/Wrap/test_list.py RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/Wrap/testShapeHelpers.py RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/test_data/ RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/test_data/1oir.mol RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/test_data/1oir_conf.mol RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeUtils.h RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/testShapeHelpers.cpp RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeEncoder.h RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp RDKit_2014_03_1/Code/GraphMol/MolTransforms/ RDKit_2014_03_1/Code/GraphMol/MolTransforms/test_list.py RDKit_2014_03_1/Code/GraphMol/MolTransforms/Wrap/ RDKit_2014_03_1/Code/GraphMol/MolTransforms/Wrap/test_list.py RDKit_2014_03_1/Code/GraphMol/MolTransforms/Wrap/testMolTransforms.py RDKit_2014_03_1/Code/GraphMol/MolTransforms/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp RDKit_2014_03_1/Code/GraphMol/MolTransforms/MolTransforms.cpp RDKit_2014_03_1/Code/GraphMol/MolTransforms/testExecs/ RDKit_2014_03_1/Code/GraphMol/MolTransforms/testExecs/.cvskeep RDKit_2014_03_1/Code/GraphMol/MolTransforms/test_data/ RDKit_2014_03_1/Code/GraphMol/MolTransforms/test_data/1oir.mol RDKit_2014_03_1/Code/GraphMol/MolTransforms/test_data/3-cyclohexylpyridine.mol RDKit_2014_03_1/Code/GraphMol/MolTransforms/test_data/1oir_canon.mol RDKit_2014_03_1/Code/GraphMol/MolTransforms/ReadMe RDKit_2014_03_1/Code/GraphMol/MolTransforms/MolTransforms.h RDKit_2014_03_1/Code/GraphMol/MolTransforms/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/MolTransforms/test1.cpp RDKit_2014_03_1/Code/GraphMol/MolCatalog/ RDKit_2014_03_1/Code/GraphMol/MolCatalog/test_list.py RDKit_2014_03_1/Code/GraphMol/MolCatalog/MolCatalogParams.cpp RDKit_2014_03_1/Code/GraphMol/MolCatalog/Wrap/ RDKit_2014_03_1/Code/GraphMol/MolCatalog/Wrap/test_list.py RDKit_2014_03_1/Code/GraphMol/MolCatalog/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.h RDKit_2014_03_1/Code/GraphMol/MolCatalog/Wrap/rough_test.py RDKit_2014_03_1/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.cpp RDKit_2014_03_1/Code/GraphMol/MolCatalog/MolCatalogEntry.h RDKit_2014_03_1/Code/GraphMol/MolCatalog/MolCatalog.h RDKit_2014_03_1/Code/GraphMol/MolCatalog/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/MolCatalog/MolCatalogParams.h RDKit_2014_03_1/Code/GraphMol/MolCatalog/test1.cpp RDKit_2014_03_1/Code/GraphMol/MolCatalog/MolCatalogEntry.cpp RDKit_2014_03_1/Code/GraphMol/SLNParse/ RDKit_2014_03_1/Code/GraphMol/SLNParse/test_list.py 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RDKit_2014_03_1/Code/GraphMol/testChirality.cpp RDKit_2014_03_1/Code/GraphMol/FindRings.cpp RDKit_2014_03_1/Code/GraphMol/ChemReactions/ RDKit_2014_03_1/Code/GraphMol/ChemReactions/test_list.py RDKit_2014_03_1/Code/GraphMol/ChemReactions/ReactionPickler.h RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/ RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/SN2_FlagProd.retain.rxn RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/SN2_FlagReact.rxn RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/SN2_FlagProd.rxn RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/v3k.cyclization1.rxn RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/v3k.cyclization2.rxn RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/atomflags.rxn RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/v3k.AmideBond.rxn RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/github243.rxn RDKit_2014_03_1/Code/GraphMol/ChemReactions/testData/cyclization2.rxn 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RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h RDKit_2014_03_1/Code/GraphMol/ChemReactions/ReactionParser.h RDKit_2014_03_1/Code/GraphMol/Kekulize.cpp RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/ RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/test_list.py RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/ RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/test_list.py RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/testChemicalFeatures.py RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/test_data/ RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/test_data/featDef.txt RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/test_data/featDef2.txt RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.h RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/FeatureParser.h RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp RDKit_2014_03_1/Code/GraphMol/Descriptors/ RDKit_2014_03_1/Code/GraphMol/Descriptors/test_list.py RDKit_2014_03_1/Code/GraphMol/Descriptors/Crippen.cpp RDKit_2014_03_1/Code/GraphMol/Descriptors/MolSurf.h RDKit_2014_03_1/Code/GraphMol/Descriptors/MolDescriptors.h RDKit_2014_03_1/Code/GraphMol/Descriptors/Wrap/ RDKit_2014_03_1/Code/GraphMol/Descriptors/Wrap/test_list.py RDKit_2014_03_1/Code/GraphMol/Descriptors/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/Descriptors/Wrap/testMolDescriptors.py RDKit_2014_03_1/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp RDKit_2014_03_1/Code/GraphMol/Descriptors/MQN.h RDKit_2014_03_1/Code/GraphMol/Descriptors/test_data/ RDKit_2014_03_1/Code/GraphMol/Descriptors/test_data/aid466.trunc.sdf RDKit_2014_03_1/Code/GraphMol/Descriptors/test_data/cyclohexane.mol RDKit_2014_03_1/Code/GraphMol/Descriptors/Lipinski.h RDKit_2014_03_1/Code/GraphMol/Descriptors/Lipinski.cpp RDKit_2014_03_1/Code/GraphMol/Descriptors/ConnectivityDescriptors.h RDKit_2014_03_1/Code/GraphMol/Descriptors/test.cpp RDKit_2014_03_1/Code/GraphMol/Descriptors/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/Descriptors/MolSurf.cpp RDKit_2014_03_1/Code/GraphMol/Descriptors/MolDescriptors.cpp RDKit_2014_03_1/Code/GraphMol/Descriptors/MQN.cpp RDKit_2014_03_1/Code/GraphMol/Descriptors/Crippen.h RDKit_2014_03_1/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp RDKit_2014_03_1/Code/GraphMol/AtomIterators.h RDKit_2014_03_1/Code/GraphMol/RankAtoms.cpp RDKit_2014_03_1/Code/GraphMol/querytest.cpp RDKit_2014_03_1/Code/GraphMol/bulktest.cpp RDKit_2014_03_1/Code/GraphMol/RWMol.cpp RDKit_2014_03_1/Code/GraphMol/molopstest.cpp RDKit_2014_03_1/Code/GraphMol/testPickler.cpp RDKit_2014_03_1/Code/GraphMol/QueryOps.h RDKit_2014_03_1/Code/GraphMol/Matrices.cpp RDKit_2014_03_1/Code/GraphMol/Bond.cpp RDKit_2014_03_1/Code/GraphMol/Bond.h RDKit_2014_03_1/Code/GraphMol/testCanon.cpp RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/ RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/Wrap/ RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/Wrap/test_list.py 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RDKit_2014_03_1/Code/GraphMol/MolPickler.h RDKit_2014_03_1/Code/GraphMol/QueryBond.cpp RDKit_2014_03_1/Code/GraphMol/itertest.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/ RDKit_2014_03_1/Code/GraphMol/FragCatalog/test_list.py RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragFPGenerator.h RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/ RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/test_list.py RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.h RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/testFrags.csv RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/test_data/ RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/test_data/testFrags.csv RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/rough_test.py RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/testExecs/ RDKit_2014_03_1/Code/GraphMol/FragCatalog/testExecs/.cvskeep RDKit_2014_03_1/Code/GraphMol/FragCatalog/test_data/ RDKit_2014_03_1/Code/GraphMol/FragCatalog/test_data/testFrags.csv RDKit_2014_03_1/Code/GraphMol/FragCatalog/test_data/4mols.smi RDKit_2014_03_1/Code/GraphMol/FragCatalog/test_data/funcGroups.txt RDKit_2014_03_1/Code/GraphMol/FragCatalog/test_data/mols.smi RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatParams.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatParams.h RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogEntry.h RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogUtils.h RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h RDKit_2014_03_1/Code/GraphMol/FragCatalog/test1.cpp RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragFPGenerator.cpp RDKit_2014_03_1/Code/GraphMol/ChemTransforms/ RDKit_2014_03_1/Code/GraphMol/ChemTransforms/test_list.py RDKit_2014_03_1/Code/GraphMol/ChemTransforms/MolFragmenter.h RDKit_2014_03_1/Code/GraphMol/ChemTransforms/ChemTransforms.h RDKit_2014_03_1/Code/GraphMol/ChemTransforms/testData/ RDKit_2014_03_1/Code/GraphMol/ChemTransforms/testData/ethanol.mol RDKit_2014_03_1/Code/GraphMol/ChemTransforms/testData/core_location.mol RDKit_2014_03_1/Code/GraphMol/ChemTransforms/testData/oldcrash.mol RDKit_2014_03_1/Code/GraphMol/ChemTransforms/testData/query_file1.txt RDKit_2014_03_1/Code/GraphMol/ChemTransforms/testData/query_file2.txt RDKit_2014_03_1/Code/GraphMol/ChemTransforms/testChemTransforms.cpp RDKit_2014_03_1/Code/GraphMol/ChemTransforms/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/ChemTransforms/MolFragmenter.cpp RDKit_2014_03_1/Code/GraphMol/ChemTransforms/ChemTransforms.cpp RDKit_2014_03_1/Code/GraphMol/MolAlign/ RDKit_2014_03_1/Code/GraphMol/MolAlign/test_list.py RDKit_2014_03_1/Code/GraphMol/MolAlign/AlignMolecules.cpp RDKit_2014_03_1/Code/GraphMol/MolAlign/Wrap/ RDKit_2014_03_1/Code/GraphMol/MolAlign/Wrap/test_list.py RDKit_2014_03_1/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp RDKit_2014_03_1/Code/GraphMol/MolAlign/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/MolAlign/Wrap/testMolAlign.py RDKit_2014_03_1/Code/GraphMol/MolAlign/test_data/ RDKit_2014_03_1/Code/GraphMol/MolAlign/test_data/1oir.mol RDKit_2014_03_1/Code/GraphMol/MolAlign/test_data/1oir_conf.mol RDKit_2014_03_1/Code/GraphMol/MolAlign/test_data/ref_e2.sdf RDKit_2014_03_1/Code/GraphMol/MolAlign/test_data/Issue241.mol RDKit_2014_03_1/Code/GraphMol/MolAlign/test_data/1oir_trans.mol RDKit_2014_03_1/Code/GraphMol/MolAlign/testMolAlign.cpp RDKit_2014_03_1/Code/GraphMol/MolAlign/O3AAlignMolecules.h RDKit_2014_03_1/Code/GraphMol/MolAlign/CMakeLists.txt RDKit_2014_03_1/Code/GraphMol/MolAlign/AlignMolecules.h RDKit_2014_03_1/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp RDKit_2014_03_1/Code/GraphMol/atomic_data.cpp RDKit_2014_03_1/Code/GraphMol/Canon.cpp RDKit_2014_03_1/Code/GraphMol/regress.txt RDKit_2014_03_1/Code/GraphMol/QueryAtom.cpp RDKit_2014_03_1/Code/GraphMol/PeriodicTable.h RDKit_2014_03_1/Code/GraphMol/BondIterators.h RDKit_2014_03_1/Code/notes.txt RDKit_2014_03_1/Code/RDGeneral/ RDKit_2014_03_1/Code/RDGeneral/versions.h.cmake RDKit_2014_03_1/Code/RDGeneral/test_list.py RDKit_2014_03_1/Code/RDGeneral/FileParseException.h RDKit_2014_03_1/Code/RDGeneral/LocaleSwitcher.h RDKit_2014_03_1/Code/RDGeneral/utils.cpp RDKit_2014_03_1/Code/RDGeneral/BadFileException.h RDKit_2014_03_1/Code/RDGeneral/Invariant.h RDKit_2014_03_1/Code/RDGeneral/testExecs/ RDKit_2014_03_1/Code/RDGeneral/testExecs/.cvskeep RDKit_2014_03_1/Code/RDGeneral/StreamOps.h RDKit_2014_03_1/Code/RDGeneral/testDict.cpp RDKit_2014_03_1/Code/RDGeneral/CMakeLists.txt RDKit_2014_03_1/Code/RDGeneral/RDLog.cpp RDKit_2014_03_1/Code/RDGeneral/types.cpp RDKit_2014_03_1/Code/RDGeneral/Dict.cpp RDKit_2014_03_1/Code/RDGeneral/Dict.h RDKit_2014_03_1/Code/RDGeneral/Invariant.cpp RDKit_2014_03_1/Code/RDGeneral/RDLog.h RDKit_2014_03_1/Code/RDGeneral/utils.h RDKit_2014_03_1/Code/RDGeneral/hash/ RDKit_2014_03_1/Code/RDGeneral/hash/hash.hpp RDKit_2014_03_1/Code/RDGeneral/hash/detail/ RDKit_2014_03_1/Code/RDGeneral/hash/detail/hash_float.hpp RDKit_2014_03_1/Code/RDGeneral/hash/detail/float_functions.hpp RDKit_2014_03_1/Code/RDGeneral/hash/hash_fwd.hpp RDKit_2014_03_1/Code/RDGeneral/hash/extensions.hpp RDKit_2014_03_1/Code/RDGeneral/types.h RDKit_2014_03_1/Code/SimDivPickers/ RDKit_2014_03_1/Code/SimDivPickers/DistPicker.cpp RDKit_2014_03_1/Code/SimDivPickers/Wrap/ RDKit_2014_03_1/Code/SimDivPickers/Wrap/test_list.py RDKit_2014_03_1/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp RDKit_2014_03_1/Code/SimDivPickers/Wrap/testMaxMin.py RDKit_2014_03_1/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp RDKit_2014_03_1/Code/SimDivPickers/Wrap/test_data/ RDKit_2014_03_1/Code/SimDivPickers/Wrap/test_data/points.csv RDKit_2014_03_1/Code/SimDivPickers/Wrap/testPickers.py RDKit_2014_03_1/Code/SimDivPickers/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/SimDivPickers/Wrap/MaxMinPicker.cpp RDKit_2014_03_1/Code/SimDivPickers/HierarchicalClusterPicker.cpp RDKit_2014_03_1/Code/SimDivPickers/CMakeLists.txt RDKit_2014_03_1/Code/SimDivPickers/MaxMinPicker.cpp RDKit_2014_03_1/Code/SimDivPickers/MaxMinPicker.h RDKit_2014_03_1/Code/SimDivPickers/HierarchicalClusterPicker.h RDKit_2014_03_1/Code/SimDivPickers/DistPicker.h RDKit_2014_03_1/Code/Query/ RDKit_2014_03_1/Code/Query/test_list.py RDKit_2014_03_1/Code/Query/AndQuery.h RDKit_2014_03_1/Code/Query/OrQuery.h RDKit_2014_03_1/Code/Query/LessQuery.h RDKit_2014_03_1/Code/Query/Query.h RDKit_2014_03_1/Code/Query/testExecs/ RDKit_2014_03_1/Code/Query/testExecs/.cvskeep RDKit_2014_03_1/Code/Query/test.cpp RDKit_2014_03_1/Code/Query/RangeQuery.h RDKit_2014_03_1/Code/Query/SetQuery.h RDKit_2014_03_1/Code/Query/EqualityQuery.h RDKit_2014_03_1/Code/Query/GreaterEqualQuery.h RDKit_2014_03_1/Code/Query/CMakeLists.txt RDKit_2014_03_1/Code/Query/XOrQuery.h RDKit_2014_03_1/Code/Query/LessEqualQuery.h RDKit_2014_03_1/Code/Query/QueryObjects.h RDKit_2014_03_1/Code/Query/GreaterQuery.h RDKit_2014_03_1/Code/Numerics/ RDKit_2014_03_1/Code/Numerics/test_list.py RDKit_2014_03_1/Code/Numerics/SquareMatrix.h RDKit_2014_03_1/Code/Numerics/Optimizer/ RDKit_2014_03_1/Code/Numerics/Optimizer/test_list.py RDKit_2014_03_1/Code/Numerics/Optimizer/BFGSOpt.cpp RDKit_2014_03_1/Code/Numerics/Optimizer/BFGSOpt.h RDKit_2014_03_1/Code/Numerics/Optimizer/testOptimizer.cpp RDKit_2014_03_1/Code/Numerics/Optimizer/CMakeLists.txt RDKit_2014_03_1/Code/Numerics/Optimizer/LinearSearch.cpp RDKit_2014_03_1/Code/Numerics/testMatrices.cpp RDKit_2014_03_1/Code/Numerics/Matrix.h RDKit_2014_03_1/Code/Numerics/EigenSolvers/ RDKit_2014_03_1/Code/Numerics/EigenSolvers/test_list.py RDKit_2014_03_1/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp RDKit_2014_03_1/Code/Numerics/EigenSolvers/CMakeLists.txt RDKit_2014_03_1/Code/Numerics/EigenSolvers/PowerEigenSolver.h RDKit_2014_03_1/Code/Numerics/EigenSolvers/testEigenSolvers.cpp RDKit_2014_03_1/Code/Numerics/CMakeLists.txt RDKit_2014_03_1/Code/Numerics/Alignment/ RDKit_2014_03_1/Code/Numerics/Alignment/test_list.py RDKit_2014_03_1/Code/Numerics/Alignment/Wrap/ RDKit_2014_03_1/Code/Numerics/Alignment/Wrap/test_list.py RDKit_2014_03_1/Code/Numerics/Alignment/Wrap/rdAlignment.cpp RDKit_2014_03_1/Code/Numerics/Alignment/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/Numerics/Alignment/Wrap/testAlignment.py RDKit_2014_03_1/Code/Numerics/Alignment/AlignPoints.h RDKit_2014_03_1/Code/Numerics/Alignment/testAlignment.cpp RDKit_2014_03_1/Code/Numerics/Alignment/AlignPoints.cpp RDKit_2014_03_1/Code/Numerics/Alignment/CMakeLists.txt RDKit_2014_03_1/Code/Numerics/Vector.h RDKit_2014_03_1/Code/Numerics/SymmMatrix.h RDKit_2014_03_1/Code/Features/ RDKit_2014_03_1/Code/Features/test_list.py RDKit_2014_03_1/Code/Features/Feature.cpp RDKit_2014_03_1/Code/Features/CMakeLists.txt RDKit_2014_03_1/Code/Features/testFeatures.cpp RDKit_2014_03_1/Code/Features/Feature.h RDKit_2014_03_1/Code/CMakeLists.txt RDKit_2014_03_1/Code/ForceField/ RDKit_2014_03_1/Code/ForceField/Wrap/ RDKit_2014_03_1/Code/ForceField/Wrap/test_list.py RDKit_2014_03_1/Code/ForceField/Wrap/ForceField.cpp RDKit_2014_03_1/Code/ForceField/Wrap/PyForceField.h RDKit_2014_03_1/Code/ForceField/Wrap/testConstraints.py RDKit_2014_03_1/Code/ForceField/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/ForceField/ForceField.cpp RDKit_2014_03_1/Code/ForceField/MMFF/ RDKit_2014_03_1/Code/ForceField/MMFF/Nonbonded.cpp RDKit_2014_03_1/Code/ForceField/MMFF/OopBend.cpp RDKit_2014_03_1/Code/ForceField/MMFF/PositionConstraint.cpp RDKit_2014_03_1/Code/ForceField/MMFF/PositionConstraint.h RDKit_2014_03_1/Code/ForceField/MMFF/StretchBend.cpp RDKit_2014_03_1/Code/ForceField/MMFF/Contribs.h RDKit_2014_03_1/Code/ForceField/MMFF/Params.h RDKit_2014_03_1/Code/ForceField/MMFF/DistanceConstraint.cpp RDKit_2014_03_1/Code/ForceField/MMFF/test_data/ RDKit_2014_03_1/Code/ForceField/MMFF/test_data/MMFF94_hypervalent.sdf RDKit_2014_03_1/Code/ForceField/MMFF/test_data/MMFF94_dative.sdf RDKit_2014_03_1/Code/ForceField/MMFF/test_data/MMFF94s_dative.smi RDKit_2014_03_1/Code/ForceField/MMFF/test_data/MMFF94s_hypervalent.smi RDKit_2014_03_1/Code/ForceField/MMFF/test_data/MMFF94_dative.smi RDKit_2014_03_1/Code/ForceField/MMFF/test_data/MMFF94s_dative.sdf RDKit_2014_03_1/Code/ForceField/MMFF/test_data/MMFF94_hypervalent.smi RDKit_2014_03_1/Code/ForceField/MMFF/test_data/MMFF_reference_logs.tgz RDKit_2014_03_1/Code/ForceField/MMFF/test_data/MMFF94s_hypervalent.sdf RDKit_2014_03_1/Code/ForceField/MMFF/Nonbonded.h RDKit_2014_03_1/Code/ForceField/MMFF/TorsionConstraint.h RDKit_2014_03_1/Code/ForceField/MMFF/testMMFFForceField.h RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.cpp RDKit_2014_03_1/Code/ForceField/MMFF/TorsionAngle.h RDKit_2014_03_1/Code/ForceField/MMFF/Params.cpp RDKit_2014_03_1/Code/ForceField/MMFF/StretchBend.h RDKit_2014_03_1/Code/ForceField/MMFF/AngleConstraint.cpp RDKit_2014_03_1/Code/ForceField/MMFF/CMakeLists.txt RDKit_2014_03_1/Code/ForceField/MMFF/AngleConstraint.h RDKit_2014_03_1/Code/ForceField/MMFF/DistanceConstraint.h RDKit_2014_03_1/Code/ForceField/MMFF/BondStretch.h RDKit_2014_03_1/Code/ForceField/MMFF/testMMFFForceField.cpp RDKit_2014_03_1/Code/ForceField/MMFF/TorsionAngle.cpp RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.h RDKit_2014_03_1/Code/ForceField/MMFF/BondStretch.cpp RDKit_2014_03_1/Code/ForceField/MMFF/TorsionConstraint.cpp RDKit_2014_03_1/Code/ForceField/MMFF/OopBend.h RDKit_2014_03_1/Code/ForceField/CMakeLists.txt RDKit_2014_03_1/Code/ForceField/Contrib.h RDKit_2014_03_1/Code/ForceField/ForceField.h RDKit_2014_03_1/Code/ForceField/UFF/ RDKit_2014_03_1/Code/ForceField/UFF/test_list.py RDKit_2014_03_1/Code/ForceField/UFF/Inversion.cpp RDKit_2014_03_1/Code/ForceField/UFF/Nonbonded.cpp RDKit_2014_03_1/Code/ForceField/UFF/PositionConstraint.cpp RDKit_2014_03_1/Code/ForceField/UFF/PositionConstraint.h RDKit_2014_03_1/Code/ForceField/UFF/Contribs.h RDKit_2014_03_1/Code/ForceField/UFF/Params.h RDKit_2014_03_1/Code/ForceField/UFF/DistanceConstraint.cpp RDKit_2014_03_1/Code/ForceField/UFF/Nonbonded.h RDKit_2014_03_1/Code/ForceField/UFF/TorsionConstraint.h RDKit_2014_03_1/Code/ForceField/UFF/AngleBend.cpp RDKit_2014_03_1/Code/ForceField/UFF/TorsionAngle.h RDKit_2014_03_1/Code/ForceField/UFF/Inversion.h RDKit_2014_03_1/Code/ForceField/UFF/Params.cpp RDKit_2014_03_1/Code/ForceField/UFF/AngleConstraint.cpp RDKit_2014_03_1/Code/ForceField/UFF/CMakeLists.txt RDKit_2014_03_1/Code/ForceField/UFF/AngleConstraint.h RDKit_2014_03_1/Code/ForceField/UFF/testUFFForceField.cpp RDKit_2014_03_1/Code/ForceField/UFF/DistanceConstraint.h RDKit_2014_03_1/Code/ForceField/UFF/BondStretch.h RDKit_2014_03_1/Code/ForceField/UFF/TorsionAngle.cpp RDKit_2014_03_1/Code/ForceField/UFF/AngleBend.h RDKit_2014_03_1/Code/ForceField/UFF/BondStretch.cpp RDKit_2014_03_1/Code/ForceField/UFF/TorsionConstraint.cpp RDKit_2014_03_1/Code/JavaWrappers/ RDKit_2014_03_1/Code/JavaWrappers/BondIterators.i RDKit_2014_03_1/Code/JavaWrappers/extend_std_vector.i RDKit_2014_03_1/Code/JavaWrappers/QueryAtom.i RDKit_2014_03_1/Code/JavaWrappers/SmilesWrite.i RDKit_2014_03_1/Code/JavaWrappers/PeriodicTable_doc.i RDKit_2014_03_1/Code/JavaWrappers/ROMol_doc.i RDKit_2014_03_1/Code/JavaWrappers/Conformer.i RDKit_2014_03_1/Code/JavaWrappers/Subgraphs.i RDKit_2014_03_1/Code/JavaWrappers/make_templates.py RDKit_2014_03_1/Code/JavaWrappers/RWMol.i RDKit_2014_03_1/Code/JavaWrappers/SanitException.i RDKit_2014_03_1/Code/JavaWrappers/MonomerInfo.i RDKit_2014_03_1/Code/JavaWrappers/Point3D_doc.i RDKit_2014_03_1/Code/JavaWrappers/QueryBond.i RDKit_2014_03_1/Code/JavaWrappers/ChemReactions_doc.i RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/ RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/GraphMolCSharp.i RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/README RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/RDKit2DotNet.csproj RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/RDKitCSharpTest/ RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/RDKitCSharpTest/Program.cs RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/RDKitCSharpTest/RDKitCSharpTest.csproj RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/RDKitCSharpTest/Properties/ RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/RDKitCSharpTest/Properties/AssemblyInfo.cs RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/CMakeLists.txt RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/Properties/ RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/Properties/AssemblyInfo.cs RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/std_list.i RDKit_2014_03_1/Code/JavaWrappers/csharp_wrapper/test.cs RDKit_2014_03_1/Code/JavaWrappers/QueryBond_doc.i RDKit_2014_03_1/Code/JavaWrappers/SmilesParse.i RDKit_2014_03_1/Code/JavaWrappers/QueryAtom_doc.i RDKit_2014_03_1/Code/JavaWrappers/Atom.i RDKit_2014_03_1/Code/JavaWrappers/ForceField.i RDKit_2014_03_1/Code/JavaWrappers/QueryOps.i RDKit_2014_03_1/Code/JavaWrappers/Bond_doc.i RDKit_2014_03_1/Code/JavaWrappers/MorganFingerprints.i RDKit_2014_03_1/Code/JavaWrappers/Transform2D_doc.i RDKit_2014_03_1/Code/JavaWrappers/ChemReactions.i RDKit_2014_03_1/Code/JavaWrappers/AddHs.i RDKit_2014_03_1/Code/JavaWrappers/ROMol.i RDKit_2014_03_1/Code/JavaWrappers/DistGeom.i RDKit_2014_03_1/Code/JavaWrappers/AvalonLib.i RDKit_2014_03_1/Code/JavaWrappers/types.i RDKit_2014_03_1/Code/JavaWrappers/GenericRDKitException.h RDKit_2014_03_1/Code/JavaWrappers/Canon.i RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/ RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src/ RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src/org/ RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src/org/RDKit/ RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src/org/RDKit/.gitignore RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/GraphMolJava.i RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/ RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/ RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ErrorHandlingTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/PDBTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ChemTransformsTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/DescriptorTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/PicklingTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/BasicMolecule2Tests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/GraphMolTest.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/SmilesTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/SuppliersTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ChemTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ChemAtomTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/LipinskiTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/DistanceGeometryTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/SmilesCreationTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ChemReactionTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ConformerTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ChemSmartsTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ForceFieldsTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/Chemv2Tests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/AtomPairsTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/ChemBondTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/WrapperTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/SmilesDetailsTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/AlignTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/GraphMolTestSuite.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/HManipulationsTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/FingerprintsTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/AromaticTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/InchiTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/BasicMoleculeTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/AvalonLibTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/src-test/org/RDKit/MemoryTests.java RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/CMakeLists.txt RDKit_2014_03_1/Code/JavaWrappers/gmwrapper/std_list.i RDKit_2014_03_1/Code/JavaWrappers/Inchi.i RDKit_2014_03_1/Code/JavaWrappers/build_docs.sh RDKit_2014_03_1/Code/JavaWrappers/MolWriters.i RDKit_2014_03_1/Code/JavaWrappers/Descriptors.i RDKit_2014_03_1/Code/JavaWrappers/Rings.i RDKit_2014_03_1/Code/JavaWrappers/MolTransforms.i RDKit_2014_03_1/Code/JavaWrappers/SmilesWriter_doc.i RDKit_2014_03_1/Code/JavaWrappers/MolSupplier.i RDKit_2014_03_1/Code/JavaWrappers/SmilesMolSupplier_doc.i RDKit_2014_03_1/Code/JavaWrappers/MolOps.i RDKit_2014_03_1/Code/JavaWrappers/TDTWriter_doc.i RDKit_2014_03_1/Code/JavaWrappers/CMakeLists.txt RDKit_2014_03_1/Code/JavaWrappers/DiversityPick.i RDKit_2014_03_1/Code/JavaWrappers/parse_doxy_html.py RDKit_2014_03_1/Code/JavaWrappers/BitOps.i RDKit_2014_03_1/Code/JavaWrappers/ExplicitBitVect.i RDKit_2014_03_1/Code/JavaWrappers/BondIterators_doc.i RDKit_2014_03_1/Code/JavaWrappers/RingInfo_doc.i RDKit_2014_03_1/Code/JavaWrappers/AtomPairs.i RDKit_2014_03_1/Code/JavaWrappers/ErrorGenerator.i RDKit_2014_03_1/Code/JavaWrappers/Fingerprints.i RDKit_2014_03_1/Code/JavaWrappers/DiversityPick.h RDKit_2014_03_1/Code/JavaWrappers/RWMol_doc.i RDKit_2014_03_1/Code/JavaWrappers/Lipinski.java RDKit_2014_03_1/Code/JavaWrappers/SDMolSupplier_doc.i RDKit_2014_03_1/Code/JavaWrappers/Bond.i RDKit_2014_03_1/Code/JavaWrappers/RDKFuncs_doc.i RDKit_2014_03_1/Code/JavaWrappers/AtomIterators.i RDKit_2014_03_1/Code/JavaWrappers/Transform3D_doc.i RDKit_2014_03_1/Code/JavaWrappers/Conformer_doc.i RDKit_2014_03_1/Code/JavaWrappers/RingInfo.i RDKit_2014_03_1/Code/JavaWrappers/point.i RDKit_2014_03_1/Code/JavaWrappers/PeriodicTable.i RDKit_2014_03_1/Code/JavaWrappers/SmartsWrite.i RDKit_2014_03_1/Code/JavaWrappers/Atom_doc.i RDKit_2014_03_1/Code/JavaWrappers/ExplicitBitVect_doc.i RDKit_2014_03_1/Code/JavaWrappers/TDTMolSupplier_doc.i RDKit_2014_03_1/Code/JavaWrappers/RDKitExceptions.i RDKit_2014_03_1/Code/JavaWrappers/ChemTransforms.i RDKit_2014_03_1/Code/JavaWrappers/transforms.i RDKit_2014_03_1/Code/RDBoost/ RDKit_2014_03_1/Code/RDBoost/python_streambuf.h RDKit_2014_03_1/Code/RDBoost/list_indexing_suite.hpp RDKit_2014_03_1/Code/RDBoost/Exceptions.h RDKit_2014_03_1/Code/RDBoost/Wrap/ RDKit_2014_03_1/Code/RDBoost/Wrap/RDBase.cpp RDKit_2014_03_1/Code/RDBoost/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/RDBoost/PySequenceHolder.h RDKit_2014_03_1/Code/RDBoost/CMakeLists.txt RDKit_2014_03_1/Code/RDBoost/Wrap.cpp RDKit_2014_03_1/Code/RDBoost/Wrap.h RDKit_2014_03_1/Code/Catalogs/ RDKit_2014_03_1/Code/Catalogs/Catalog.cpp RDKit_2014_03_1/Code/Catalogs/CatalogEntry.h RDKit_2014_03_1/Code/Catalogs/Catalog.h RDKit_2014_03_1/Code/Catalogs/CMakeLists.txt RDKit_2014_03_1/Code/Catalogs/CatalogParams.h RDKit_2014_03_1/Code/Catalogs/CatalogEntry.cpp RDKit_2014_03_1/Code/Catalogs/CatalogParams.cpp RDKit_2014_03_1/Code/Geometry/ RDKit_2014_03_1/Code/Geometry/test_list.py RDKit_2014_03_1/Code/Geometry/Transform.h RDKit_2014_03_1/Code/Geometry/testTransforms.cpp RDKit_2014_03_1/Code/Geometry/testData/ RDKit_2014_03_1/Code/Geometry/testData/grid1.bin RDKit_2014_03_1/Code/Geometry/Wrap/ RDKit_2014_03_1/Code/Geometry/Wrap/test_list.py RDKit_2014_03_1/Code/Geometry/Wrap/UniformGrid3D.cpp RDKit_2014_03_1/Code/Geometry/Wrap/CMakeLists.txt RDKit_2014_03_1/Code/Geometry/Wrap/testGeometry.py RDKit_2014_03_1/Code/Geometry/Wrap/rdGeometry.cpp RDKit_2014_03_1/Code/Geometry/Wrap/Point.cpp RDKit_2014_03_1/Code/Geometry/UniformGrid3D.cpp RDKit_2014_03_1/Code/Geometry/point.h RDKit_2014_03_1/Code/Geometry/GridUtils.h RDKit_2014_03_1/Code/Geometry/Transform2D.h RDKit_2014_03_1/Code/Geometry/Grid3D.h RDKit_2014_03_1/Code/Geometry/Transform3D.h RDKit_2014_03_1/Code/Geometry/UniformGrid3D.h RDKit_2014_03_1/Code/Geometry/point.cpp RDKit_2014_03_1/Code/Geometry/Transform2D.cpp RDKit_2014_03_1/Code/Geometry/CMakeLists.txt RDKit_2014_03_1/Code/Geometry/Utils.h RDKit_2014_03_1/Code/Geometry/GridUtils.cpp RDKit_2014_03_1/Code/Geometry/testGrid.cpp RDKit_2014_03_1/Code/Geometry/Transform3D.cpp RDKit_2014_03_1/Code/doxygen/ RDKit_2014_03_1/Code/doxygen/doxygen.config RDKit_2014_03_1/Code/cmake/ RDKit_2014_03_1/Code/cmake/Modules/ RDKit_2014_03_1/Code/cmake/Modules/RDKitUtils.cmake RDKit_2014_03_1/Code/cmake/Modules/FindNumPy.cmake RDKit_2014_03_1/Code/cmake/Modules/FindInchi.cmake RDKit_2014_03_1/Code/cmake/Modules/FindBISON.cmake RDKit_2014_03_1/Code/cmake/Modules/FindFLEX.cmake RDKit_2014_03_1/Code/cmake/Modules/BoostUtils.cmake sudo -u fink-bld [ENV] sh -c /tmp/fink.Z28jO unzip -o /sw/src/INCHI-1-API.ZIP Archive: /sw/src/INCHI-1-API.ZIP creating: INCHI-1-API/ creating: INCHI-1-API/INCHI/ creating: INCHI-1-API/INCHI/common/ inflating: INCHI-1-API/INCHI/common/aux2atom.h inflating: INCHI-1-API/INCHI/common/extr_ct.h inflating: INCHI-1-API/INCHI/common/ichi.h inflating: INCHI-1-API/INCHI/common/ichican2.c inflating: INCHI-1-API/INCHI/common/ichicano.c inflating: INCHI-1-API/INCHI/common/ichicano.h inflating: INCHI-1-API/INCHI/common/ichicans.c inflating: INCHI-1-API/INCHI/common/ichicant.h inflating: INCHI-1-API/INCHI/common/ichicomn.h inflating: INCHI-1-API/INCHI/common/ichicomp.h inflating: INCHI-1-API/INCHI/common/ichidrp.h inflating: INCHI-1-API/INCHI/common/ichierr.h inflating: INCHI-1-API/INCHI/common/ichiisot.c inflating: INCHI-1-API/INCHI/common/ichimain.h inflating: INCHI-1-API/INCHI/common/ichimak2.c inflating: INCHI-1-API/INCHI/common/ichimake.c inflating: INCHI-1-API/INCHI/common/ichimake.h inflating: INCHI-1-API/INCHI/common/ichimap1.c inflating: INCHI-1-API/INCHI/common/ichimap2.c inflating: INCHI-1-API/INCHI/common/ichimap4.c inflating: INCHI-1-API/INCHI/common/ichinorm.c inflating: INCHI-1-API/INCHI/common/ichinorm.h inflating: INCHI-1-API/INCHI/common/ichiparm.c inflating: INCHI-1-API/INCHI/common/ichiparm.h inflating: INCHI-1-API/INCHI/common/ichiprt1.c inflating: INCHI-1-API/INCHI/common/ichiprt2.c inflating: INCHI-1-API/INCHI/common/ichiprt3.c inflating: INCHI-1-API/INCHI/common/ichiqueu.c inflating: INCHI-1-API/INCHI/common/ichiread.c inflating: INCHI-1-API/INCHI/common/ichiring.c inflating: INCHI-1-API/INCHI/common/ichiring.h inflating: INCHI-1-API/INCHI/common/ichirvr1.c inflating: INCHI-1-API/INCHI/common/ichirvr2.c inflating: INCHI-1-API/INCHI/common/ichirvr3.c inflating: INCHI-1-API/INCHI/common/ichirvr4.c inflating: INCHI-1-API/INCHI/common/ichirvr5.c inflating: 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INCHI-1-API/INCHI/common/lreadmol.h inflating: INCHI-1-API/INCHI/common/runichi.c inflating: INCHI-1-API/INCHI/common/sha2.c inflating: INCHI-1-API/INCHI/common/sha2.h inflating: INCHI-1-API/INCHI/common/strutil.c inflating: INCHI-1-API/INCHI/common/strutil.h inflating: INCHI-1-API/INCHI/common/util.c inflating: INCHI-1-API/INCHI/common/util.h creating: INCHI-1-API/INCHI/gcc/ creating: INCHI-1-API/INCHI/gcc/inchi-1/ inflating: INCHI-1-API/INCHI/gcc/inchi-1/makefile inflating: INCHI-1-API/INCHI/gcc/inchi-1/makefile32 inflating: INCHI-1-API/INCHI/gcc/inchi-1/readme.txt creating: INCHI-1-API/INCHI/main/ inflating: INCHI-1-API/INCHI/main/debug.c inflating: INCHI-1-API/INCHI/main/debug.h inflating: INCHI-1-API/INCHI/main/dispstru.c inflating: INCHI-1-API/INCHI/main/dispstru.h inflating: INCHI-1-API/INCHI/main/ichimain.c inflating: INCHI-1-API/INCHI/main/mode.h inflating: INCHI-1-API/INCHI/main/mol2atom.c inflating: INCHI-1-API/INCHI/main/mol2atom.h inflating: INCHI-1-API/INCHI/main/readinch.c inflating: INCHI-1-API/INCHI/main/readmol.c inflating: INCHI-1-API/INCHI/main/readmol.h inflating: INCHI-1-API/INCHI/readme.txt creating: INCHI-1-API/INCHI/vc9/ creating: INCHI-1-API/INCHI/vc9/inchi-1/ creating: INCHI-1-API/INCHI/vc9/inchi-1/Debug/ inflating: INCHI-1-API/INCHI/vc9/inchi-1/inchi-1.aps inflating: INCHI-1-API/INCHI/vc9/inchi-1/inchi-1.rc inflating: INCHI-1-API/INCHI/vc9/inchi-1/inchi-1.sln inflating: INCHI-1-API/INCHI/vc9/inchi-1/inchi-1.vcproj creating: INCHI-1-API/INCHI/vc9/inchi-1/Release/ inflating: INCHI-1-API/INCHI/vc9/inchi-1/resource.h creating: INCHI-1-API/INCHI/vc9/inchi-1/x64/ creating: INCHI-1-API/INCHI/vc9/inchi-1/x64/Debug/ creating: INCHI-1-API/INCHI/vc9/inchi-1/x64/Release/ creating: INCHI-1-API/INCHI_API/ creating: INCHI-1-API/INCHI_API/gcc_so_makefile/ inflating: INCHI-1-API/INCHI_API/gcc_so_makefile/libinchi-pas.def inflating: INCHI-1-API/INCHI_API/gcc_so_makefile/libinchi.def inflating: INCHI-1-API/INCHI_API/gcc_so_makefile/libinchi.map inflating: INCHI-1-API/INCHI_API/gcc_so_makefile/makefile inflating: INCHI-1-API/INCHI_API/gcc_so_makefile/readme.txt creating: INCHI-1-API/INCHI_API/gcc_so_makefile/result/ inflating: INCHI-1-API/INCHI_API/gcc_so_makefile/result/inchi_main.gz inflating: INCHI-1-API/INCHI_API/gcc_so_makefile/result/libinchi.so.1.04.00.gz inflating: INCHI-1-API/INCHI_API/gcc_so_makefile/result/readme.txt extracting: INCHI-1-API/INCHI_API/gcc_so_makefile/run_make_on_linux.sh creating: INCHI-1-API/INCHI_API/inchi_dll/ inflating: INCHI-1-API/INCHI_API/inchi_dll/aux2atom.h inflating: INCHI-1-API/INCHI_API/inchi_dll/extr_ct.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichi.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichican2.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichicano.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichicano.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichicans.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichicant.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichicomn.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichicomp.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichidrp.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichierr.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiisot.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichilnct.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichimain.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichimak2.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichimake.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichimake.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichimap1.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichimap2.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichimap4.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichinorm.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichinorm.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiparm.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiparm.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiprt1.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiprt2.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiprt3.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiqueu.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiread.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiring.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichiring.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichirvr1.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichirvr2.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichirvr3.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichirvr4.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichirvr5.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichirvr6.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichirvr7.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichirvrs.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichisize.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichisort.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichister.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichister.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichitaut.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichitaut.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichitime.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichi_bns.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichi_bns.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ichi_io.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ichi_io.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ikey_base26.c inflating: INCHI-1-API/INCHI_API/inchi_dll/ikey_base26.h inflating: INCHI-1-API/INCHI_API/inchi_dll/ikey_dll.c inflating: INCHI-1-API/INCHI_API/inchi_dll/inchicmp.h inflating: INCHI-1-API/INCHI_API/inchi_dll/inchi_api.h inflating: INCHI-1-API/INCHI_API/inchi_dll/inchi_dll.c inflating: INCHI-1-API/INCHI_API/inchi_dll/inchi_dll_a.c inflating: INCHI-1-API/INCHI_API/inchi_dll/inchi_dll_a.h inflating: INCHI-1-API/INCHI_API/inchi_dll/inchi_dll_a2.c inflating: INCHI-1-API/INCHI_API/inchi_dll/inchi_dll_main.c inflating: INCHI-1-API/INCHI_API/inchi_dll/inchi_dll_main.h inflating: INCHI-1-API/INCHI_API/inchi_dll/incomdef.h inflating: INCHI-1-API/INCHI_API/inchi_dll/inpdef.h inflating: INCHI-1-API/INCHI_API/inchi_dll/lreadmol.h inflating: INCHI-1-API/INCHI_API/inchi_dll/mode.h inflating: INCHI-1-API/INCHI_API/inchi_dll/runichi.c inflating: INCHI-1-API/INCHI_API/inchi_dll/sha2.c inflating: INCHI-1-API/INCHI_API/inchi_dll/sha2.h inflating: INCHI-1-API/INCHI_API/inchi_dll/strutil.c inflating: INCHI-1-API/INCHI_API/inchi_dll/strutil.h inflating: INCHI-1-API/INCHI_API/inchi_dll/util.c inflating: INCHI-1-API/INCHI_API/inchi_dll/util.h creating: INCHI-1-API/INCHI_API/inchi_main/ inflating: INCHI-1-API/INCHI_API/inchi_main/e_0dstereo.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_0dstereo.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_comdef.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_ctl_data.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_ichicomp.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_ichierr.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_ichimain.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_ichimain_a.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_ichisize.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_ichi_io.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_ichi_io.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_ichi_parms.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_ichi_parms.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_inchi_atom.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_inchi_atom.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_inpdef.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_mode.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_mol2atom.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_readinch.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_readmol.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_readmol.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_readstru.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_readstru.h inflating: INCHI-1-API/INCHI_API/inchi_main/e_util.c inflating: INCHI-1-API/INCHI_API/inchi_main/e_util.h inflating: INCHI-1-API/INCHI_API/inchi_main/ichitime.h inflating: INCHI-1-API/INCHI_API/inchi_main/inchi_api.h inflating: INCHI-1-API/INCHI_API/inchi_main/lreadmol.h creating: INCHI-1-API/INCHI_API/python_sample/ inflating: INCHI-1-API/INCHI_API/python_sample/lightsdf.py inflating: INCHI-1-API/INCHI_API/python_sample/make_inchi.py inflating: INCHI-1-API/INCHI_API/python_sample/PyINCHI.py inflating: INCHI-1-API/INCHI_API/python_sample/readme.txt inflating: INCHI-1-API/INCHI_API/readme.txt creating: INCHI-1-API/INCHI_API/vc9/ creating: INCHI-1-API/INCHI_API/vc9/inchi_dll/ creating: INCHI-1-API/INCHI_API/vc9/inchi_dll/Debug/ inflating: INCHI-1-API/INCHI_API/vc9/inchi_dll/INCHI_DLL.APS inflating: INCHI-1-API/INCHI_API/vc9/inchi_dll/INCHI_DLL.rc inflating: INCHI-1-API/INCHI_API/vc9/inchi_dll/inchi_dll.sln inflating: INCHI-1-API/INCHI_API/vc9/inchi_dll/inchi_dll.vcproj creating: INCHI-1-API/INCHI_API/vc9/inchi_dll/Release/ inflating: INCHI-1-API/INCHI_API/vc9/inchi_dll/resource.h inflating: INCHI-1-API/INCHI_API/vc9/inchi_dll/vc9_libinchi.def creating: INCHI-1-API/INCHI_API/vc9/inchi_dll/x64/ creating: INCHI-1-API/INCHI_API/vc9/inchi_dll/x64/Debug/ creating: INCHI-1-API/INCHI_API/vc9/inchi_dll/x64/Release/ creating: INCHI-1-API/INCHI_API/vc9/inchi_main/ creating: INCHI-1-API/INCHI_API/vc9/inchi_main/Debug/ inflating: INCHI-1-API/INCHI_API/vc9/inchi_main/inchi_main.aps inflating: INCHI-1-API/INCHI_API/vc9/inchi_main/INCHI_MAIN.rc inflating: INCHI-1-API/INCHI_API/vc9/inchi_main/inchi_main.sln inflating: INCHI-1-API/INCHI_API/vc9/inchi_main/inchi_main.vcproj inflating: INCHI-1-API/INCHI_API/vc9/inchi_main/inchi_main1.aps inflating: INCHI-1-API/INCHI_API/vc9/inchi_main/inchi_main1.rc creating: INCHI-1-API/INCHI_API/vc9/inchi_main/Release/ inflating: INCHI-1-API/INCHI_API/vc9/inchi_main/resource.h creating: INCHI-1-API/INCHI_API/vc9/inchi_main/x64/ creating: INCHI-1-API/INCHI_API/vc9/inchi_main/x64/Debug/ creating: INCHI-1-API/INCHI_API/vc9/inchi_main/x64/Release/ inflating: INCHI-1-API/LICENCE inflating: INCHI-1-API/readme.txt inflating: INCHI-1-API/readme2.txt sudo -u fink-bld [ENV] sh -c /tmp/fink.9gJFn /tmp/fink.0DpHG #!/bin/sh -efv RDBASE=$PWD export RDBASE NUMPROC="$(sysctl -n hw.ncpu)" sysctl -n hw.ncpu mkdir build mkdir -p External/INCHI-API External/java_lib cp -r ../INCHI-1-API/INCHI_API/inchi_dll External/INCHI-API/src # cp %p/share/java/junit/junit.jar External/java_lib/. cd build BOOSTROOT=/sw CC=/usr/bin/gcc CXX=/usr/bin/g++ cmake -DRDK_BUILD_INCHI_SUPPORT=ON -DFLEX_EXECUTABLE:FILEPATH=/usr/bin/flex -DCMAKE_OSX_SYSROOT:PATH="/" -DCMAKE_OSX_DEPLOYMENT_TARGET:STRING="" -DCMAKE_INSTALL_PREFIX=/sw -DCMAKE_INSTALL_NAME_DIR=/sw/lib/rdkit -DCMAKE_PREFIX_PATH=/sw -DBOOST_LIBRARYDIR=""$BOOSTROOT"/lib" -DBOOST_ROOT="$BOOSTROOT" -DBoost_NO_SYSTEM_PATHS=ON -DPYTHON_LIBRARY=/sw/lib/python2.7/config/libpython2.7.dylib -DPYTHON_INCLUDE_DIR=/sw/include/python2.7 -DPYTHON_EXECUTABLE=/sw/bin/python2.7 .. -- The C compiler identification is Clang 5.1.0 -- The CXX compiler identification is Clang 5.1.0 -- Check for working C compiler: /usr/bin/gcc -- Check for working C compiler: /usr/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ -- Check for working CXX compiler: /usr/bin/g++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check if the system is big endian -- Searching 16 bit integer -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Found PythonLibs: /sw/lib/python2.7/config/libpython2.7.dylib (found version "2.7.8") -- Found PythonInterp: /sw/bin/python2.7 (found version "2.7.8") -- Boost version: 1.53.0 -- Found the following Boost libraries: -- python -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for pthread_create -- Looking for pthread_create - found -- Found Threads: TRUE -- Could NOT find InChI in system locations (missing: INCHI_LIBRARY INCHI_INCLUDE_DIR) -- Found InChI software locally -- Boost version: 1.53.0 -- Found the following Boost libraries: -- regex -- Configuring done -- Generating done -- Build files have been written to: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/build make -j $NUMPROC install Scanning dependencies of target inchi_support [ 0%] Built target inchi_support Scanning dependencies of target Inchi Scanning dependencies of target Inchi_static [ 0%] [ 0%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichican2.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichican2.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1107:49: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:warning: 1107:49: warning: '&&' within '||' [-Wlogical-op-parentheses] '&&' within '||' [-Wlogical-op-parentheses] if ( uCurAuxRank == uInpAuxRank && nCurAtNumb > nInpAtNumb || uCurAuxRank > uInpAuxRank ) { if ( uCurAuxRank == uInpAuxRank && nCurAtNumb > nInpAtNumb || uCurAuxRank > uInpAuxRank ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1107:49: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1107:49: note: place parentheses around the '&&' expression to silence this warning if ( uCurAuxRank == uInpAuxRank && nCurAtNumb > nInpAtNumb || uCurAuxRank > uInpAuxRank ) { ^ ( ) if ( uCurAuxRank == uInpAuxRank && nCurAtNumb > nInpAtNumb || uCurAuxRank > uInpAuxRank ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1612:15: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1612:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = -(startCt1 - startCt2) ) { ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ if ( diff = -(startCt1 - startCt2) ) { ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1612:15: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.cplace parentheses around the assignment to silence this warning: 1612:15: note: if ( diff = -(startCt1 - startCt2) ) { ^ place parentheses around the assignment to silence this warning ( ) if ( diff = -(startCt1 - startCt2) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1612:15: note: use '==' to turn this assignment into an equality comparison if ( diff = -(startCt1 - startCt2) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1612:15 : ^ == note: use '==' to turn this assignment into an equality comparison if ( diff = -(startCt1 - startCt2) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1645:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c1645::1645:1515:: notewarning: : place parentheses around the assignment to silence this warningusing the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ^ ( ) if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 *//sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1645:15: ~~~~~^~~~~~~~~~~~~~~~~~~~ note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.cuse '==' to turn this assignment into an equality comparison: 1645:15: note: place parentheses around the assignment to silence this warning if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ^ == if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1645:15: note: use '==' to turn this assignment into an equality comparison if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1706:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = -(startAt1 - startAt2) ) { ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1706:15: note: place parentheses around the assignment to silence this warning if ( diff = -(startAt1 - startAt2) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1706:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1706:15: note: use '==' to turn this assignment into an equality comparison 15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = -(startAt1 - startAt2) ) { if ( diff = -(startAt1 - startAt2) ) { ^ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1706:15: note: place parentheses around the assignment to silence this warning if ( diff = -(startAt1 - startAt2) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1709:15: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.cwarning:1706:15: note: use '==' to turn this assignment into an equality comparison: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = -(endAt1 - endAt2) ) { ~~~~~^~~~~~~~~~~~~~~~~~~~ if ( diff = -(startAt1 - startAt2) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c: ^1709 : ==15: note: place parentheses around the assignment to silence this warning if ( diff = -(endAt1 - endAt2) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c::17091709::1515: note: use '==' to turn this assignment into an equality comparison : if ( diff = -(endAt1 - endAt2) ) { warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ == if ( diff = -(endAt1 - endAt2) ) { ~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1709:15: note: place parentheses around the assignment to silence this warning if ( diff = -(endAt1 - endAt2) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1709:15: note: use '==' to turn this assignment into an equality comparison if ( diff = -(endAt1 - endAt2) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1886:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1886:15: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1886:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1886:15: if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ note: use '==' to turn this assignment into an equality comparison ~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1886:15: note: place parentheses around the assignment to silence this warning if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ^ == if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1886:15: note: use '==' to turn this assignment into an equality comparison if ( diff = -(endCt1 - endCt2) ) { /* negative sign reproduces results for NSC=28393 */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1915:19: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1915:19: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = -(lenNumH1 - lenNumH2) ) { /* negative sign reproduces results for NSC=28393 */ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1915:19: note: place parentheses around the assignment to silence this warning if ( diff = -(lenNumH1 - lenNumH2) ) { /* negative sign reproduces results for NSC=28393 */ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1915:19: note: place parentheses around the assignment to silence this warning if ( diff = -(lenNumH1 - lenNumH2) ) { /* negative sign reproduces results for NSC=28393 */ ^ ( ) if ( diff = -(lenNumH1 - lenNumH2) ) { /* negative sign reproduces results for NSC=28393 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1915:19:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c :note: use '==' to turn this assignment into an equality comparison 1915:19: note: use '==' to turn this assignment into an equality comparison if ( diff = -(lenNumH1 - lenNumH2) ) { /* negative sign reproduces results for NSC=28393 */ ^ == if ( diff = -(lenNumH1 - lenNumH2) ) { /* negative sign reproduces results for NSC=28393 */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1968:19: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1968:19: if ( diff = -(len_iso_sort_key1 - len_iso_sort_key2) ) { /* negative sign reproduces results for NSC=28393 */warning : ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1968:19: note: place parentheses around the assignment to silence this warning if ( diff = -(len_iso_sort_key1 - len_iso_sort_key2) ) { /* negative sign reproduces results for NSC=28393 */ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1968:19: note: place parentheses around the assignment to silence this warning if ( diff = -(len_iso_sort_key1 - len_iso_sort_key2) ) { /* negative sign reproduces results for NSC=28393 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1968:19: note if ( diff = -(len_iso_sort_key1 - len_iso_sort_key2) ) { /* negative sign reproduces results for NSC=28393 */ ^ ( ) : use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:1968:19: note: use '==' to turn this assignment into an equality comparison if ( diff = -(len_iso_sort_key1 - len_iso_sort_key2) ) { /* negative sign reproduces results for NSC=28393 */ ^ == if ( diff = -(len_iso_sort_key1 - len_iso_sort_key2) ) { /* negative sign reproduces results for NSC=28393 */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2940:55: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2940:55: warning: '&&' within '||' [-Wlogical-op-parentheses] L_rho_fix_diff == L_rho_fix_prev && kLeast_rho_fix[L_rho_fix_diff].i < I_rho_fix_prev ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ L_rho_fix_diff == L_rho_fix_prev && kLeast_rho_fix[L_rho_fix_diff].i < I_rho_fix_prev ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2940:55/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:: note: place parentheses around the '&&' expression to silence this warning 2940:55: note: place parentheses around the '&&' expression to silence this warning L_rho_fix_diff == L_rho_fix_prev && kLeast_rho_fix[L_rho_fix_diff].i < I_rho_fix_prev ) { ^ ( ) L_rho_fix_diff == L_rho_fix_prev && kLeast_rho_fix[L_rho_fix_diff].i < I_rho_fix_prev ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2979:55: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2979:55 L_rho_diff == L_rho_fix_prev && kLeast_rho[L_rho_diff].i < I_rho_fix_prev ) {: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2979:55: note: place parentheses around the '&&' expression to silence this warning L_rho_diff == L_rho_fix_prev && kLeast_rho[L_rho_diff].i < I_rho_fix_prev ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2979:55: note: place parentheses around the '&&' expression to silence this warning L_rho_diff == L_rho_fix_prev && kLeast_rho[L_rho_diff].i < I_rho_fix_prev ) { ^ ( ) L_rho_diff == L_rho_fix_prev && kLeast_rho[L_rho_diff].i < I_rho_fix_prev ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2998:38: warning: '&&' within '||' [-Wlogical-op-parentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2998:38: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( qzb_rho > 0 || !qzb_rho && !bRhoIsDiscrete ) { ~~ ~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2998:38: note: if ( qzb_rho > 0 || !qzb_rho && !bRhoIsDiscrete ) { ~~ ~~~~~~~~~^~~~~~~~~~~~~~~~~~ place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:2998:38: note: place parentheses around the '&&' expression to silence this warning if ( qzb_rho > 0 || !qzb_rho && !bRhoIsDiscrete ) { ^ ( ) if ( qzb_rho > 0 || !qzb_rho && !bRhoIsDiscrete ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3070:30: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !lab || qzb_rho < 0 && ( !pzb_rho_fix || qzb_rho_fix > 0 ) ) ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3070:30: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3070:30: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !lab || qzb_rho < 0 && ( !pzb_rho_fix || qzb_rho_fix > 0 ) ) ^ ( ) if ( !lab || qzb_rho < 0 && ( !pzb_rho_fix || qzb_rho_fix > 0 ) ) ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3070:30: note: place parentheses around the '&&' expression to silence this warning if ( !lab || qzb_rho < 0 && ( !pzb_rho_fix || qzb_rho_fix > 0 ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3202:21: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( UserAction && USER_ACTION_QUIT == (*UserAction)() || ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3202:21: note: place parentheses around the '&&' expression to silence this warning if ( UserAction && USER_ACTION_QUIT == (*UserAction)() || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3203:22/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c: warning: :'&&' within '||' [-Wlogical-op-parentheses]3202 :21: warning: '&&' within '||' [-Wlogical-op-parentheses] ConsoleQuit && (*ConsoleQuit)() ) { if ( UserAction && USER_ACTION_QUIT == (*UserAction)() || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3203:22: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3202:21: note: place parentheses around the '&&' expression to silence this warning ConsoleQuit && (*ConsoleQuit)() ) { ^ ( ) if ( UserAction && USER_ACTION_QUIT == (*UserAction)() || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3203:22: warning: '&&' within '||' [-Wlogical-op-parentheses] ConsoleQuit && (*ConsoleQuit)() ) { ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3203:22: note: place parentheses around the '&&' expression to silence this warning ConsoleQuit && (*ConsoleQuit)() ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3832:49: warning: '&&' within '||' [-Wlogical-op-parentheses] t_group_info->t_group && t_group_info->num_t_groups > 0 || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3832:49: note: place parentheses around the '&&' expression to silence this warning t_group_info->t_group && t_group_info->num_t_groups > 0 || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3836:67: warning: '&&' within '||' [-Wlogical-op-parentheses] t_group_info->nNumIsotopicEndpoints > 1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3836:67: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3832:49: warning: '&&' within '||' [-Wlogical-op-parentheses] t_group_info->nNumIsotopicEndpoints > 1 && ^ t_group_info->t_group && t_group_info->num_t_groups > 0 || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3832:49: note: place parentheses around the '&&' expression to silence this warning t_group_info->t_group && t_group_info->num_t_groups > 0 || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3836:67: warning: '&&' within '||' [-Wlogical-op-parentheses] t_group_info->nNumIsotopicEndpoints > 1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:3836:67: note: place parentheses around the '&&' expression to silence this warning t_group_info->nNumIsotopicEndpoints > 1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4379:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( s[iBase].num_isotopic_atoms && !s[iBase].bIgnoreIsotopic || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4379:49: note: place parentheses around the '&&' expression to silence this warning if ( s[iBase].num_isotopic_atoms && !s[iBase].bIgnoreIsotopic || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4380:49: warning: '&&' within '||' [-Wlogical-op-parentheses] s[iBase].bHasIsotopicTautGroups && !bTautIgnoreIsotopic || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4380:49: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4379:49: s[iBase].bHasIsotopicTautGroups && !bTautIgnoreIsotopic || warning : ^'&&' within '||' [-Wlogical-op-parentheses] ( ) if ( s[iBase].num_isotopic_atoms && !s[iBase].bIgnoreIsotopic || /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~: 4381:49: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4379:49: note: place parentheses around the '&&' expression to silence this warning bUseIsoAuxBase[iBase] && !bTautIgnoreIsotopic ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ if ( s[iBase].num_isotopic_atoms && !s[iBase].bIgnoreIsotopic || /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c ^: 4381 ( ): 49: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4380:49: warning: '&&' within '||' [-Wlogical-op-parentheses] bUseIsoAuxBase[iBase] && !bTautIgnoreIsotopic ) { ^ ( ) s[iBase].bHasIsotopicTautGroups && !bTautIgnoreIsotopic || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4380:49: note: place parentheses around the '&&' expression to silence this warning s[iBase].bHasIsotopicTautGroups && !bTautIgnoreIsotopic || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4381:49: warning: '&&' within '||' [-Wlogical-op-parentheses] bUseIsoAuxBase[iBase] && !bTautIgnoreIsotopic ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4381:49: note: place parentheses around the '&&' expression to silence this warning bUseIsoAuxBase[iBase] && !bTautIgnoreIsotopic ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4396:42: warning: '&&' within '||' [-Wlogical-op-parentheses] maxlen_iso_exchg_atnos && !iso_exchg_atnos ) { ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4396:42: note: place parentheses around the '&&' expression to silence this warning maxlen_iso_exchg_atnos && !iso_exchg_atnos ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4406:61: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at_base[i].endpoint || iso_exchg_atnos && (at_base[i].cFlags & AT_FLAG_ISO_H_POINT) ) { ~~ ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4396:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c42::4406 :warning61: :'&&' within '||' [-Wlogical-op-parentheses] note: place parentheses around the '&&' expression to silence this warning maxlen_iso_exchg_atnos && !iso_exchg_atnos ) { ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c if ( at_base[i].endpoint || iso_exchg_atnos && (at_base[i].cFlags & AT_FLAG_ISO_H_POINT) ) {: 4396 ^:42: note: place parentheses around the '&&' expression to silence this warning ( ) maxlen_iso_exchg_atnos && !iso_exchg_atnos ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4406:61: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at_base[i].endpoint || iso_exchg_atnos && (at_base[i].cFlags & AT_FLAG_ISO_H_POINT) ) { ~~ ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4406:61: note: place parentheses around the '&&' expression to silence this warning if ( at_base[i].endpoint || iso_exchg_atnos && (at_base[i].cFlags & AT_FLAG_ISO_H_POINT) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4449:39: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( iso_sort_key = t_group_info->t_group[m].iWeight ) { ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4449:39: note: place parentheses around the assignment to silence this warning if ( iso_sort_key = t_group_info->t_group[m].iWeight ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4449:39: note: use '==' to turn this assignment into an equality comparison if ( iso_sort_key = t_group_info->t_group[m].iWeight ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4449:39: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( iso_sort_key = t_group_info->t_group[m].iWeight ) { ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4449:39: note: place parentheses around the assignment to silence this warning if ( iso_sort_key = t_group_info->t_group[m].iWeight ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4449:39: note: use '==' to turn this assignment into an equality comparison if ( iso_sort_key = t_group_info->t_group[m].iWeight ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4696:45: warning: '&&' within '||' [-Wlogical-op-parentheses] iflag = s[iBase].num_isotopic_atoms && !s[iBase].bIgnoreIsotopic || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4696:45: note: place parentheses around the '&&' expression to silence this warning iflag = s[iBase].num_isotopic_atoms && !s[iBase].bIgnoreIsotopic || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4697:46: warning: '&&' within '||' [-Wlogical-op-parentheses] s[iBase].bHasIsotopicTautGroups && !bTautIgnoreIsotopic; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4697:46: note: place parentheses around the '&&' expression to silence this warning s[iBase].bHasIsotopicTautGroups && !bTautIgnoreIsotopic; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4700:60: warning: '&&' within '||' [-Wlogical-op-parentheses] iflag = iflag || s[iOther].num_isotopic_atoms && !s[iOther].bIgnoreIsotopic; ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4696::45: warning: '&&' within '||' [-Wlogical-op-parentheses] 4700:60: note: place parentheses around the '&&' expression to silence this warning iflag = s[iBase].num_isotopic_atoms && !s[iBase].bIgnoreIsotopic || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4696:45: note: iflag = iflag || s[iOther].num_isotopic_atoms && !s[iOther].bIgnoreIsotopic; ^ ( ) place parentheses around the '&&' expression to silence this warning iflag = s[iBase].num_isotopic_atoms && !s[iBase].bIgnoreIsotopic || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4697:46: warning: '&&' within '||' [-Wlogical-op-parentheses] s[iBase].bHasIsotopicTautGroups && !bTautIgnoreIsotopic; ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4697:46: note: place parentheses around the '&&' expression to silence this warning s[iBase].bHasIsotopicTautGroups && !bTautIgnoreIsotopic; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4700:60: warning: '&&' within '||' [-Wlogical-op-parentheses] iflag = iflag || s[iOther].num_isotopic_atoms && !s[iOther].bIgnoreIsotopic; ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichican2.c:4700:60: note: place parentheses around the '&&' expression to silence this warning iflag = iflag || s[iOther].num_isotopic_atoms && !s[iOther].bIgnoreIsotopic; ^ ( ) 25 warnings generated. 25 warnings generated. [ 1%] [ 1%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichicano.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichicano.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:180:38: warning: '&&' within '||' [-Wlogical-op-parentheses] :180:38: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( TickEnd->clockTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ if ( TickEnd->clockTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:180:38: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c if ( TickEnd->clockTime >= 0 && TickStart->clockTime >= 0 || ^ ( ) :180:38: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.cnote:181:38: warning: : '&&' within '||' [-Wlogical-op-parentheses]place parentheses around the '&&' expression to silence this warning if ( TickEnd->clockTime >= 0 && TickStart->clockTime >= 0 || ^ TickEnd->clockTime <= 0 && TickStart->clockTime <= 0) { ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:181:38: warning: '&&' within '||' [-Wlogical-op-parentheses] TickEnd->clockTime <= 0 && TickStart->clockTime <= 0) { ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:181:38: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:181:38: note: place parentheses around the '&&' expression to silence this warning TickEnd->clockTime <= 0 && TickStart->clockTime <= 0) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:180:33: warning: comparison of unsigned expression >= 0 is always true [-Wtautological-compare] TickEnd->clockTime <= 0 && TickStart->clockTime <= 0) { ^ ( ) if ( TickEnd->clockTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~ ^ ~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:180:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:180:33: warning: comparison of unsigned expression >= 0 is always true [-Wtautological-compare] 62: warning: comparison of unsigned expression >= 0 is always true [-Wtautological-compare] if ( TickEnd->clockTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~ ^ ~ if ( TickEnd->clockTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~~~ ^ ~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:180:62: warning: comparison of unsigned expression >= 0 is always true [-Wtautological-compare] if ( TickEnd->clockTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~~~ ^ ~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:261:33: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( clockCurrTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:261:33: note: place parentheses around the '&&' expression to silence this warning if ( clockCurrTime >= 0 && TickStart->clockTime >= 0 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:262:33: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:261:33: warning: '&&' within '||' [-Wlogical-op-parentheses] clockCurrTime <= 0 && TickStart->clockTime <= 0) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:262:33: note: place parentheses around the '&&' expression to silence this warning if ( clockCurrTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:261:33: clockCurrTime <= 0 && TickStart->clockTime <= 0) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:261:note: place parentheses around the '&&' expression to silence this warning 28: warning: comparison of unsigned expression >= 0 is always true [-Wtautological-compare] if ( clockCurrTime >= 0 && TickStart->clockTime >= 0 || ^ ( ) if ( clockCurrTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~ ^ ~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:262:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c33:: 261:57: warning: comparison of unsigned expression >= 0 is always true [-Wtautological-compare]warning: '&&' within '||' [-Wlogical-op-parentheses] clockCurrTime <= 0 && TickStart->clockTime <= 0) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( clockCurrTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~~~ ^ ~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:262:33: note: place parentheses around the '&&' expression to silence this warning clockCurrTime <= 0 && TickStart->clockTime <= 0) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:261:28: warning: comparison of unsigned expression >= 0 is always true [-Wtautological-compare] if ( clockCurrTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~ ^ ~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:261:57: warning: comparison of unsigned expression >= 0 is always true [-Wtautological-compare] if ( clockCurrTime >= 0 && TickStart->clockTime >= 0 || ~~~~~~~~~~~~~~~~~~~~ ^ ~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:532:78: warning: '&&' within '||' [-Wlogical-op-parentheses] (nMode & CMODE_ISO) && CANON_MODE_TAUT == (nMode & CANON_MODE_TAUT) && nLenLinearCTIsotopicTautomer > 0 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:532:78: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:532:78: warning: '&&' within '||' [-Wlogical-op-parentheses] (nMode & CMODE_ISO) && CANON_MODE_TAUT == (nMode & CANON_MODE_TAUT) && nLenLinearCTIsotopicTautomer > 0 ^ ( ) (nMode & CMODE_ISO) && CANON_MODE_TAUT == (nMode & CANON_MODE_TAUT) && nLenLinearCTIsotopicTautomer > 0 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:532:78: note: place parentheses around the '&&' expression to silence this warning (nMode & CMODE_ISO) && CANON_MODE_TAUT == (nMode & CANON_MODE_TAUT) && nLenLinearCTIsotopicTautomer > 0 ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:581:33: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c if ( (nMode & CMODE_STEREO) && (nLenLinearCTStereoDble > 0 || nLenLinearCTStereoCarb > 0 ) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:581:33: :581:33: note: place parentheses around the '&&' expression to silence this warningwarning: '&&' within '||' [-Wlogical-op-parentheses] if ( (nMode & CMODE_STEREO) && (nLenLinearCTStereoDble > 0 || nLenLinearCTStereoCarb > 0 ) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ if ( (nMode & CMODE_STEREO) && (nLenLinearCTStereoDble > 0 || nLenLinearCTStereoCarb > 0 ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:582:37: warning: '&&' within '||' [-Wlogical-op-parentheses] (nMode & CMODE_ISO_STEREO) && (nLenLinearCTIsotopicStereoDble > 0 || nLenLinearCTIsotopicStereoCarb > 0 ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c::581582::3337:: notenote: place parentheses around the '&&' expression to silence this warning: place parentheses around the '&&' expression to silence this warning if ( (nMode & CMODE_STEREO) && (nLenLinearCTStereoDble > 0 || nLenLinearCTStereoCarb > 0 ) || (nMode & CMODE_ISO_STEREO) && (nLenLinearCTIsotopicStereoDble > 0 || nLenLinearCTIsotopicStereoCarb > 0 ) ) { ^ ^ ( ) ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:582:37: warning: '&&' within '||' [-Wlogical-op-parentheses] (nMode & CMODE_ISO_STEREO) && (nLenLinearCTIsotopicStereoDble > 0 || nLenLinearCTIsotopicStereoCarb > 0 ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicano.c:582:37: note: place parentheses around the '&&' expression to silence this warning (nMode & CMODE_ISO_STEREO) && (nLenLinearCTIsotopicStereoDble > 0 || nLenLinearCTIsotopicStereoCarb > 0 ) ) { ^ ( ) 11 warnings generated. 11 warnings generated. [ 1%] [ 1%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichicans.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichicans.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:275:44: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c: if ( bIsotopic && (at[jc].num_iso_H[0] > 1 || ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275:44: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:275:44: note: place parentheses around the '&&' expression to silence this warning if ( bIsotopic && (at[jc].num_iso_H[0] > 1 || ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( bIsotopic && (at[jc].num_iso_H[0] > 1 || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:275:44: note: place parentheses around the '&&' expression to silence this warning if ( bIsotopic && (at[jc].num_iso_H[0] > 1 || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c::390:34: warning: '&&' within '||' [-Wlogical-op-parentheses] 390:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bAllene > 0 && !num_allene || bAllene == 0 && num_allene ) { ~~~~~~~~~~~~^~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:390: if ( bAllene > 0 && !num_allene || bAllene == 0 && num_allene ) {34 : ~~~~~~~~~~~~^~~~~~~~~~~~~~ ~~ note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:390:34: note: place parentheses around the '&&' expression to silence this warning if ( bAllene > 0 && !num_allene || bAllene == 0 && num_allene ) { ^ ( ) if ( bAllene > 0 && !num_allene || bAllene == 0 && num_allene ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:390:65: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c: if ( bAllene > 0 && !num_allene || bAllene == 0 && num_allene ) {390 :65: warning ~~ ~~~~~~~~~~~~~^~~~~~~~~~~~~ : '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:390:65: note: place parentheses around the '&&' expression to silence this warning if ( bAllene > 0 && !num_allene || bAllene == 0 && num_allene ) { ~~ ~~~~~~~~~~~~~^~~~~~~~~~~~~ if ( bAllene > 0 && !num_allene || bAllene == 0 && num_allene ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:390:65: note: place parentheses around the '&&' expression to silence this warning if ( bAllene > 0 && !num_allene || bAllene == 0 && num_allene ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:778:70: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nAtomRank2 < nAtomRank1 || nAtomRank2 == nAtomRank1 && i1 < i2 ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:778:70: note: place parentheses around the '&&' expression to silence this warning if ( nAtomRank2 < nAtomRank1 || nAtomRank2 == nAtomRank1 && i1 < i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:778:70: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nAtomRank2 < nAtomRank1 || nAtomRank2 == nAtomRank1 && i1 < i2 ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:778:70: note: place parentheses around the '&&' expression to silence this warning if ( nAtomRank2 < nAtomRank1 || nAtomRank2 == nAtomRank1 && i1 < i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:1039:38: warning: '&&' within '||' [-Wlogical-op-parentheses] at[cur1].stereo_atom_parity && !PARITY_WELL_DEF (at[cur1].stereo_atom_parity) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:1039:38: note: place parentheses around the '&&' expression to silence this warning at[cur1].stereo_atom_parity && !PARITY_WELL_DEF (at[cur1].stereo_atom_parity) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:1039:38: warning: '&&' within '||' [-Wlogical-op-parentheses] at[cur1].stereo_atom_parity && !PARITY_WELL_DEF (at[cur1].stereo_atom_parity) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichicans.c:1039:38: note: place parentheses around the '&&' expression to silence this warning at[cur1].stereo_atom_parity && !PARITY_WELL_DEF (at[cur1].stereo_atom_parity) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 5 warnings generated. 5 warnings generated. [ 2%] [ 2%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichiisot.c.o Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichiisot.c.o [ 2%] [ 2%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichilnct.c.o Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichilnct.c.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:70: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:409:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strchr( p, '=' ) ) { ~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:409:28: note: place parentheses around the assignment to silence this warning if ( q = strchr( p, '=' ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:409:28: note: use '==' to turn this assignment into an equality comparison if ( q = strchr( p, '=' ) ) { ^ == In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:70: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:409:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strchr( p, '=' ) ) { ~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:409:28: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h if ( q = strchr( p, '=' ) ) {: 427 ^: 28 ( ): warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:using the result of an assignment as a condition without parentheses [-Wparentheses] 409:28: note: use '==' to turn this assignment into an equality comparison if ( q = strstr( p, sStructHdrPlnNoLblVal ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:427:28: if ( q = strchr( p, '=' ) ) { ^ == note: place parentheses around the assignment to silence this warning if ( q = strstr( p, sStructHdrPlnNoLblVal ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:427:28: note: use '==' to turn this assignment into an equality comparison if ( q = strstr( p, sStructHdrPlnNoLblVal ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:427:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strstr( p, sStructHdrPlnNoLblVal ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:427:28: note: place parentheses around the assignment to silence this warning if ( q = strstr( p, sStructHdrPlnNoLblVal ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:427:28: note: use '==' to turn this assignment into an equality comparison if ( q = strstr( p, sStructHdrPlnNoLblVal ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:630:62: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !bItemIsOver || i != num_atoms || s && p != s ) { ~~ ~~^~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:630:62: note: place parentheses around the '&&' expression to silence this warning if ( !bItemIsOver || i != num_atoms || s && p != s ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:630:62: warning:662:50: warning: '&&' within '||' [-Wlogical-op-parentheses]: '&&' within '||' [-Wlogical-op-parentheses] if ( i >= num_atoms || s && p >= s ) { ~~ ~~^~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:662:50: note: place parentheses around the '&&' expression to silence this warning if ( !bItemIsOver || i != num_atoms || s && p != s ) { ~~ ~~^~~~~~~~~ if ( i >= num_atoms || s && p >= s ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:630:62: note: place parentheses around the '&&' expression to silence this warning if ( !bItemIsOver || i != num_atoms || s && p != s ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:662:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i >= num_atoms || s && p >= s ) { ~~ ~~^~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:662:50: note: place parentheses around the '&&' expression to silence this warning if ( i >= num_atoms || s && p >= s ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:835:62: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !bItemIsOver || i != num_atoms || s && p != s ) { ~~ ~~^~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:835:62: note: place parentheses around the '&&' expression to silence this warning if ( !bItemIsOver || i != num_atoms || s && p != s ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:856:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:856:35: note: place parentheses around the assignment to silence this warning if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:856:35: note: use '==' to turn this assignment into an equality comparison if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:870:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i >= num_atoms || s && p >= s ) { ~~ ~~^~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:870:50: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:835:62: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i >= num_atoms || s && p >= s ) { ^ ( ) if ( !bItemIsOver || i != num_atoms || s && p != s ) { ~~ ~~^~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:835:62: note: place parentheses around the '&&' expression to silence this warning if ( !bItemIsOver || i != num_atoms || s && p != s ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:856:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:856:35: note: place parentheses around the assignment to silence this warning if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:932:44:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:856:35: note warning: '&&' within '||' [-Wlogical-op-parentheses] : use '==' to turn this assignment into an equality comparison if ( !bItemIsOver || s && p != s || i != num_atoms ) { ~~ ~~^~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:932:44: note: place parentheses around the '&&' expression to silence this warning if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ^ == if ( !bItemIsOver || s && p != s || i != num_atoms ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:870:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i >= num_atoms || s && p >= s ) { ~~ ~~^~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:870:50: note: place parentheses around the '&&' expression to silence this warning if ( i >= num_atoms || s && p >= s ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:932:44: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !bItemIsOver || s && p != s || i != num_atoms ) { ~~ ~~^~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:932:44: note: place parentheses around the '&&' expression to silence this warning if ( !bItemIsOver || s && p != s || i != num_atoms ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1361:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strstr( p, sStructHdrXmlNumber ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1361:24: note: place parentheses around the assignment to silence this warning if ( q = strstr( p, sStructHdrXmlNumber ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1361:24: note: use '==' to turn this assignment into an equality comparison if ( q = strstr( p, sStructHdrXmlNumber ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1374:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strstr( p, sStructHdrXmlIdName ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1374:24: note: place parentheses around the assignment to silence this warning if ( q = strstr( p, sStructHdrXmlIdName ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1374:24: note: use '==' to turn this assignment into an equality comparison if ( q = strstr( p, sStructHdrXmlIdName ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1386:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strstr( p, sStructHdrXmlIdValue ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1386:24: note: place parentheses around the assignment to silence this warning if ( q = strstr( p, sStructHdrXmlIdValue ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1386:24: note: use '==' to turn this assignment into an equality comparison if ( q = strstr( p, sStructHdrXmlIdValue ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1402:30: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bHeaderRead && (bFatal=0, len=sizeof(sStructMsgXmlErr)-1, !memcmp(szLine, sStructMsgXmlErr, len)) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1402:30: note: place parentheses around the '&&' expression to silence this warning if ( bHeaderRead && (bFatal=0, len=sizeof(sStructMsgXmlErr)-1, !memcmp(szLine, sStructMsgXmlErr, len)) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1403:115: warning: '&&' within '||' [-Wlogical-op-parentheses] bHeaderRead && (len=sizeof(sStructMsgXmlErrFatal)-1, !memcmp(szLine, sStructMsgXmlErrFatal, len))&&(bFatal=1)) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1403:115: note: place parentheses around the '&&' expression to silence this warning bHeaderRead && (len=sizeof(sStructMsgXmlErrFatal)-1, !memcmp(szLine, sStructMsgXmlErrFatal, len))&&(bFatal=1)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1361:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strstr( p, sStructHdrXmlNumber ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1361:24: note: place parentheses around the assignment to silence this warning if ( q = strstr( p, sStructHdrXmlNumber ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1361:24: note: use '==' to turn this assignment into an equality comparison if ( q = strstr( p, sStructHdrXmlNumber ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1374:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strstr( p, sStructHdrXmlIdName ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1374:24: note: place parentheses around the assignment to silence this warning if ( q = strstr( p, sStructHdrXmlIdName ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1374:24: note: use '==' to turn this assignment into an equality comparison if ( q = strstr( p, sStructHdrXmlIdName ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1386:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strstr( p, sStructHdrXmlIdValue ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1386:24: note: place parentheses around the assignment to silence this warning if ( q = strstr( p, sStructHdrXmlIdValue ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1386:24: note: use '==' to turn this assignment into an equality comparison if ( q = strstr( p, sStructHdrXmlIdValue ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1402:30: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bHeaderRead && (bFatal=0, len=sizeof(sStructMsgXmlErr)-1, !memcmp(szLine, sStructMsgXmlErr, len)) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1402:30: note: place parentheses around the '&&' expression to silence this warning if ( bHeaderRead && (bFatal=0, len=sizeof(sStructMsgXmlErr)-1, !memcmp(szLine, sStructMsgXmlErr, len)) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1403:115: warning: '&&' within '||' [-Wlogical-op-parentheses] bHeaderRead && (len=sizeof(sStructMsgXmlErrFatal)-1, !memcmp(szLine, sStructMsgXmlErrFatal, len))&&(bFatal=1)) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1403:115: note: place parentheses around the '&&' expression to silence this warning bHeaderRead && (len=sizeof(sStructMsgXmlErrFatal)-1, !memcmp(szLine, sStructMsgXmlErrFatal, len))&&(bFatal=1)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1858:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1858:31: note: place parentheses around the assignment to silence this warning if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1858:31: note: use '==' to turn this assignment into an equality comparison if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1858:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1858:31: note: place parentheses around the assignment to silence this warning if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:1858:31: note: use '==' to turn this assignment into an equality comparison if ( pszCoord = (MOL_COORD*) inchi_malloc(inchi_max(num_atoms,1) * sizeof(MOL_COORD)) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2557:49: warning: '&&' within '||' [-Wlogical-op-parentheses] parity != INCHI_PARITY_UNKNOWN && parity != INCHI_PARITY_UNDEFINED ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2557:49: note: place parentheses around the '&&' expression to silence this warning parity != INCHI_PARITY_UNKNOWN && parity != INCHI_PARITY_UNDEFINED ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2573:27: warning: '&&' within '||' [-Wlogical-op-parentheses] 0 <= a2 && a2 < nNumAtoms || ~~~~~~~~^~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2573:27: note: place parentheses around the '&&' expression to silence this warning 0 <= a2 && a2 < nNumAtoms || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2574:55: warning: '&&' within '||' [-Wlogical-op-parentheses] type == INCHI_StereoType_DoubleBond && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2574:55: note: place parentheses around the '&&' expression to silence this warning type == INCHI_StereoType_DoubleBond && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2557:49: warning: '&&' within '||' [-Wlogical-op-parentheses] parity != INCHI_PARITY_UNKNOWN && parity != INCHI_PARITY_UNDEFINED ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2557:49: note: place parentheses around the '&&' expression to silence this warning parity != INCHI_PARITY_UNKNOWN && parity != INCHI_PARITY_UNDEFINED ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2573:27: warning: '&&' within '||' [-Wlogical-op-parentheses] 0 <= a2 && a2 < nNumAtoms || ~~~~~~~~^~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2573:27: note: place parentheses around the '&&' expression to silence this warning 0 <= a2 && a2 < nNumAtoms || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2574:55: warning: '&&' within '||' [-Wlogical-op-parentheses] type == INCHI_StereoType_DoubleBond && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2574:55: note: place parentheses around the '&&' expression to silence this warning type == INCHI_StereoType_DoubleBond && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2778:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( k = ReconcileAllCmlBondParities( at, nNumAtoms, 0 ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2778:16: note: place parentheses around the assignment to silence this warning if ( k = ReconcileAllCmlBondParities( at, nNumAtoms, 0 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2778:16: note: use '==' to turn this assignment into an equality comparison if ( k = ReconcileAllCmlBondParities( at, nNumAtoms, 0 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2778:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( k = ReconcileAllCmlBondParities( at, nNumAtoms, 0 ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2778:16: note: place parentheses around the assignment to silence this warning if ( k = ReconcileAllCmlBondParities( at, nNumAtoms, 0 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/aux2atom.h:2778:16: note: use '==' to turn this assignment into an equality comparison if ( k = ReconcileAllCmlBondParities( at, nNumAtoms, 0 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:252:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( orig_at_data->atom = CreateInchi_Atom( nNumAtoms ) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:252:37: note: place parentheses around the assignment to silence this warning if ( orig_at_data->atom = CreateInchi_Atom( nNumAtoms ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:252:37: note: use '==' to turn this assignment into an equality comparison if ( orig_at_data->atom = CreateInchi_Atom( nNumAtoms ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:270:49: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( orig_at_data->stereo0D = CreateInchi_Stereo0D( nNumStereo0D ) ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:270:49: note: place parentheses around the assignment to silence this warning if ( orig_at_data->stereo0D = CreateInchi_Stereo0D( nNumStereo0D ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:270:49: note: use '==' to turn this assignment into an equality comparison if ( orig_at_data->stereo0D = CreateInchi_Stereo0D( nNumStereo0D ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:252:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( orig_at_data->atom = CreateInchi_Atom( nNumAtoms ) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:252:37: note: place parentheses around the assignment to silence this warning if ( orig_at_data->atom = CreateInchi_Atom( nNumAtoms ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:252:37: note: use '==' to turn this assignment into an equality comparison if ( orig_at_data->atom = CreateInchi_Atom( nNumAtoms ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:270:49: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( orig_at_data->stereo0D = CreateInchi_Stereo0D( nNumStereo0D ) ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:270:49: note: place parentheses around the assignment to silence this warning if ( orig_at_data->stereo0D = CreateInchi_Stereo0D( nNumStereo0D ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichilnct.c:270:49: note: use '==' to turn this assignment into an equality comparison if ( orig_at_data->stereo0D = CreateInchi_Stereo0D( nNumStereo0D ) ) { ^ == 20 warnings generated. 20 warnings generated. [ 2%] [ 2%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichimak2.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichimak2.c.o Scanning dependencies of target DataStructs_static /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:307:27: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pHillFormula = (char*) inchi_malloc( nLen+1 ) ) { ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:307:27: note: place parentheses around the assignment to silence this warning if ( pHillFormula = (char*) inchi_malloc( nLen+1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:307:27: note: use '==' to turn this assignment into an equality comparison if ( pHillFormula = (char*) inchi_malloc( nLen+1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:307:27: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pHillFormula = (char*) inchi_malloc( nLen+1 ) ) { ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:307:27: note: place parentheses around the assignment to silence this warning if ( pHillFormula = (char*) inchi_malloc( nLen+1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:307:27: note: use '==' to turn this assignment into an equality comparison if ( pHillFormula = (char*) inchi_malloc( nLen+1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:426:48: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bAllene != bAlleneInv || !bAllene && ~~ ~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:426:48: note: place parentheses around the '&&' expression to silence this warning if ( bAllene != bAlleneInv || !bAllene && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:426:48: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bAllene != bAlleneInv || !bAllene && ~~ ~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:426:48: note: place parentheses around the '&&' expression to silence this warning if ( bAllene != bAlleneInv || !bAllene && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:560:63: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !Stereo || Stereo && !Stereo->nNumberOfStereoCenters && !Stereo->nNumberOfStereoBonds) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:560:63: note: place parentheses around the '&&' expression to silence this warning if ( !Stereo || Stereo && !Stereo->nNumberOfStereoCenters && !Stereo->nNumberOfStereoBonds) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:560:63: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !Stereo || Stereo && !Stereo->nNumberOfStereoCenters && !Stereo->nNumberOfStereoBonds) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:560:63: note: place parentheses around the '&&' expression to silence this warning if ( !Stereo || Stereo && !Stereo->nNumberOfStereoCenters && !Stereo->nNumberOfStereoBonds) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:751:35: warning: '&&' within '||' [-Wlogical-op-parentheses] (pCS->LinearCTStereoCarb && pCS->LinearCTStereoCarbInv || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:751:35: note: place parentheses around the '&&' expression to silence this warning (pCS->LinearCTStereoCarb && pCS->LinearCTStereoCarbInv || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:752:35: warning: '&&' within '||' [-Wlogical-op-parentheses] pCS->LinearCTStereoDble && pCS->LinearCTStereoDbleInv) && ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:752:35: note: place parentheses around the '&&' expression to silence this warning pCS->LinearCTStereoDble && pCS->LinearCTStereoDbleInv) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:751:35: warning: '&&' within '||' [-Wlogical-op-parentheses] (pCS->LinearCTStereoCarb && pCS->LinearCTStereoCarbInv || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:751:35: note: place parentheses around the '&&' expression to silence this warning (pCS->LinearCTStereoCarb && pCS->LinearCTStereoCarbInv || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:752:35: warning: '&&' within '||' [-Wlogical-op-parentheses] pCS->LinearCTStereoDble && pCS->LinearCTStereoDbleInv) && ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:752:35: note: place parentheses around the '&&' expression to silence this warning pCS->LinearCTStereoDble && pCS->LinearCTStereoDbleInv) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:938:69: warning: '&&' within '||' [-Wlogical-op-parentheses] t_group_info->nNumIsotopicEndpoints>1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:938:69: note: place parentheses around the '&&' expression to silence this warning t_group_info->nNumIsotopicEndpoints>1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1002:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1002:28: note: place parentheses around the assignment to silence this warning if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1002:28: note: use '==' to turn this assignment into an equality comparison if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1026:43: warning: '&&' within '||' [-Wlogical-op-parentheses] (pCS->LinearCTIsotopicStereoCarb && pCS->LinearCTIsotopicStereoCarbInv || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1026:43: note: place parentheses around the '&&' expression to silence this warning (pCS->LinearCTIsotopicStereoCarb && pCS->LinearCTIsotopicStereoCarbInv || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:938:69: warning: '&&' within '||' [-Wlogical-op-parentheses] :1027:43: warning: '&&' within '||' [-Wlogical-op-parentheses] t_group_info->nNumIsotopicEndpoints>1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:938:69: note: place parentheses around the '&&' expression to silence this warning t_group_info->nNumIsotopicEndpoints>1 && ^ pCS->LinearCTIsotopicStereoDble && pCS->LinearCTIsotopicStereoDbleInv) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1027:43: note: place parentheses around the '&&' expression to silence this warning pCS->LinearCTIsotopicStereoDble && pCS->LinearCTIsotopicStereoDbleInv) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1002:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1002:28: note: place parentheses around the assignment to silence this warning if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1002:28: note: use '==' to turn this assignment into an equality comparison if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1026:43: warning: '&&' within '||' [-Wlogical-op-parentheses] (pCS->LinearCTIsotopicStereoCarb && pCS->LinearCTIsotopicStereoCarbInv || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1026:43: note: place parentheses around the '&&' expression to silence this warning (pCS->LinearCTIsotopicStereoCarb && pCS->LinearCTIsotopicStereoCarbInv || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1027:43: warning: '&&' within '||' [-Wlogical-op-parentheses] pCS->LinearCTIsotopicStereoDble && pCS->LinearCTIsotopicStereoDbleInv) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1027:43: note: place parentheses around the '&&' expression to silence this warning pCS->LinearCTIsotopicStereoDble && pCS->LinearCTIsotopicStereoDbleInv) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1163:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1163:28: note: place parentheses around the assignment to silence this warning if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1163:28: note: use '==' to turn this assignment into an equality comparison if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1163:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1163:28: note: place parentheses around the assignment to silence this warning if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimak2.c:1163:28: note: use '==' to turn this assignment into an equality comparison if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ^ == 10 warnings generated. 10 warnings generated. [ 2%] [ 2%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichimake.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichimake.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:208:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = strcmp( szEl1, szEl2 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:208:22: note: place parentheses around the assignment to silence this warning if ( ret = strcmp( szEl1, szEl2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:208:22: note: use '==' to turn this assignment into an equality comparison if ( ret = strcmp( szEl1, szEl2 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:211:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = count2 - count1 ) { ~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:211:22: note: place parentheses around the assignment to silence this warning if ( ret = count2 - count1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:211:22: note: use '==' to turn this assignment into an equality comparison if ( ret = count2 - count1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:240:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = strcmp( szEl1, szEl2 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:240:22: note: place parentheses around the assignment to silence this warning if ( ret = strcmp( szEl1, szEl2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:240:22: note: use '==' to turn this assignment into an equality comparison if ( ret = strcmp( szEl1, szEl2 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:243:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = count2 - count1 ) { ~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:243:22: note: place parentheses around the assignment to silence this warning if ( ret = count2 - count1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c::208:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 243:22: note: use '==' to turn this assignment into an equality comparison if ( ret = count2 - count1 ) { ^ == if ( ret = strcmp( szEl1, szEl2 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:208:22: note: place parentheses around the assignment to silence this warning if ( ret = strcmp( szEl1, szEl2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:208:22: note: use '==' to turn this assignment into an equality comparison if ( ret = strcmp( szEl1, szEl2 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:211:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = count2 - count1 ) { ~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:211:22: note: place parentheses around the assignment to silence this warning if ( ret = count2 - count1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:211:22: note: use '==' to turn this assignment into an equality comparison if ( ret = count2 - count1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:262:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = len2 - len1 ) { ~~~~~^~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:262:15: note: place parentheses around the assignment to silence this warning if ( ret = len2 - len1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:262:15: note: use '==' to turn this assignment into an equality comparison if ( ret = len2 - len1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:266:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nTautomer[i] - (int)i1->nTautomer[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:266:18: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->nTautomer[i] - (int)i1->nTautomer[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:266:18: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->nTautomer[i] - (int)i1->nTautomer[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:240:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = strcmp( szEl1, szEl2 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:240:22: note: place parentheses around the assignment to silence this warning if ( ret = strcmp( szEl1, szEl2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:240:22: note: use '==' to turn this assignment into an equality comparison if ( ret = strcmp( szEl1, szEl2 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:243:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = count2 - count1 ) { ~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:243:22: note: place parentheses around the assignment to silence this warning if ( ret = count2 - count1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:243:22: note: use '==' to turn this assignment into an equality comparison if ( ret = count2 - count1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:313:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:262:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = len2 - len1 ) { ~~~~~^~~~~~~~~~~~~ if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:262:15: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.cnote:: 313place parentheses around the assignment to silence this warning: 14: note: place parentheses around the assignment to silence this warning if ( ret = len2 - len1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:262:15: note: use '==' to turn this assignment into an equality comparison if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { if ( ret = len2 - len1 ) { ^ ^ ( ) == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:313:14: note: use '==' to turn this assignment into an equality comparison if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:266:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:322:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nTautomer[i] - (int)i1->nTautomer[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 266:18: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:322:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->nTautomer[i] - (int)i1->nTautomer[i] ) ^ ( ) if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:266:18: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:322:14: note: use '==' to turn this assignment into an equality comparison note: use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) ^ == if ( ret = (int)i2->nTautomer[i] - (int)i1->nTautomer[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:328:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:328:18: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:328:18: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:334:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = i2->lenConnTable - i1->lenConnTable ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:334:14: note: place parentheses around the assignment to silence this warning if ( ret = i2->lenConnTable - i1->lenConnTable ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:334:14: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->lenConnTable - i1->lenConnTable ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:338:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:338:18: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:338:18: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:344:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = num_H2 - num_H1 ) ~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:344:14: note: place parentheses around the assignment to silence this warning if ( ret = num_H2 - num_H1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:344:14: note: use '==' to turn this assignment into an equality comparison if ( ret = num_H2 - num_H1 ) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:313:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] == if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:313:14: note: place parentheses around the assignment to silence this warning if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:313:14: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:360:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ^ == if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:360:14: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:322:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ): 360 ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:322::1414:: notenote: : place parentheses around the assignment to silence this warninguse '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) ^ ( ) if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:322:14: note ==: use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:328:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:328:18: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:418:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:328:18: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:418:18: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:334:14: warning if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ): using the result of an assignment as a condition without parentheses [-Wparentheses] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:418:18: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->lenConnTable - i1->lenConnTable ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:334:14: note: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ^ == if ( ret = i2->lenConnTable - i1->lenConnTable ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:334:14: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->lenConnTable - i1->lenConnTable ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:423:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:338:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:423:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:338:18: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:423:22: note if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ): use '==' to turn this assignment into an equality comparison ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:338:18: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ == if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:344:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:425:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = num_H2 - num_H1 ) ~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:344:14: note: place parentheses around the assignment to silence this warning if ( ret = num_H2 - num_H1 ) if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:425:22: ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.cnote:: 344place parentheses around the assignment to silence this warning: 14: note: use '==' to turn this assignment into an equality comparison if ( ret = num_H2 - num_H1 ) ^ == if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:425:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:360:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:431:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:360:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c ( ): 431:22: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.cplace parentheses around the assignment to silence this warning: 360:14: note: use '==' to turn this assignment into an equality comparison if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ^ == if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:431:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:433:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:418:18: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.cwarning:: 433using the result of an assignment as a condition without parentheses [-Wparentheses]: 22: note: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c : ^418 : ( )18 : note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:433:22: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:418:18 if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ): ^note : ==use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:435:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:435:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:423:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:435:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:423:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ == if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:441:18:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c :warning423: :using the result of an assignment as a condition without parentheses [-Wparentheses]22 : note: use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfIsotopicTGroups || i1->nNumberOfIsotopicTGroups ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:441: if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber )18 : ^ note ==: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfIsotopicTGroups || i1->nNumberOfIsotopicTGroups ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:425:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :441:18: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = i2->nNumberOfIsotopicTGroups || i1->nNumberOfIsotopicTGroups ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:425:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:425:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ): 476 ^: 14 ==: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:476:14: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:431:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:476:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:431: if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) {22 : ^ note ==: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:431:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:433:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:433:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:433:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:435:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:435:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:435:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:441:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = i2->nNumberOfIsotopicTGroups || i1->nNumberOfIsotopicTGroups ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:441:18: note: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfIsotopicTGroups || i1->nNumberOfIsotopicTGroups ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:441:18: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfIsotopicTGroups || i1->nNumberOfIsotopicTGroups ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:476:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:476:14: note: place parentheses around the assignment to silence this warning if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:476:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1046:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1046:31: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1046:31: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1048:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1048:31: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1048:31: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1051:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1051:31: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1051:31: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1053:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1053:31: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1053:31: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1046:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1055:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1046:31: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1055:31: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1046 if ( diff = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ): 31 ^: ( )note : use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1055:31: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ == if ( diff = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1048:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1061:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1048:31: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1061:35: note: if ( diff = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference )place parentheses around the assignment to silence this warning ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1048:31: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1061:35 if ( diff = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ): ^note : ==use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1051 if ( diff = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ): 31 ^: == warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1063:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1051:31: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1063:35: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1051:31: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1063:35: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ == if ( diff = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1053:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1065:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1053:31: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1065:35: note: if ( diff = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D )place parentheses around the assignment to silence this warning ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1053:31: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1065: if ( diff = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ^ == 35: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1055:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ^ == if ( diff = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1055:31: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1067:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1055:31: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1067:35: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ == if ( diff = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1067:35: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1061:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ^ == if ( diff = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1061:35: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1061:35: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1063:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1063:35: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1063:35: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1065:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1065:35: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1065:35: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1067:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1067:35: note: place parentheses around the assignment to silence this warning if ( diff = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1067:35: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1190:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->nBondAtom1[i] - (int)Stereo1->nBondAtom1[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1190:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->nBondAtom1[i] - (int)Stereo1->nBondAtom1[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1190:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nBondAtom1[i] - (int)Stereo1->nBondAtom1[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1192:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->nBondAtom2[i] - (int)Stereo1->nBondAtom2[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1192:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->nBondAtom2[i] - (int)Stereo1->nBondAtom2[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1192:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nBondAtom2[i] - (int)Stereo1->nBondAtom2[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1194:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->b_parity[i] - (int)Stereo1->b_parity[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1194:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->b_parity[i] - (int)Stereo1->b_parity[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1194:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->b_parity[i] - (int)Stereo1->b_parity[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1197:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->nNumberOfStereoBonds - (int)Stereo1->nNumberOfStereoBonds ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1197:18: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->nNumberOfStereoBonds - (int)Stereo1->nNumberOfStereoBonds ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1197:18: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nNumberOfStereoBonds - (int)Stereo1->nNumberOfStereoBonds ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1190:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->nBondAtom1[i] - (int)Stereo1->nBondAtom1[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1210:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1190:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->nNumber[i] - (int)Stereo1->nNumber[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1210:26: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->nBondAtom1[i] - (int)Stereo1->nBondAtom1[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1190:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nNumber[i] - (int)Stereo1->nNumber[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1210:26: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nBondAtom1[i] - (int)Stereo1->nBondAtom1[i] ) ^ == if ( ret = (int)Stereo2->nNumber[i] - (int)Stereo1->nNumber[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1192:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1212:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->nBondAtom2[i] - (int)Stereo1->nBondAtom2[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1192 if ( ret = (int)Stereo2->t_parity[i] - (int)Stereo1->t_parity[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:22: note: place parentheses around the assignment to silence this warning :1212:26: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->nBondAtom2[i] - (int)Stereo1->nBondAtom2[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1192:22 if ( ret = (int)Stereo2->t_parity[i] - (int)Stereo1->t_parity[i] ): ^note : ( )use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1212:26: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nBondAtom2[i] - (int)Stereo1->nBondAtom2[i] ) ^ == if ( ret = (int)Stereo2->t_parity[i] - (int)Stereo1->t_parity[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1194:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1215:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->b_parity[i] - (int)Stereo1->b_parity[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1194:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->nNumberOfStereoCenters - (int)Stereo1->nNumberOfStereoCenters ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1215:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->b_parity[i] - (int)Stereo1->b_parity[i] ) ^ ( ) if ( ret = (int)Stereo2->nNumberOfStereoCenters - (int)Stereo1->nNumberOfStereoCenters ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1194:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1215:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->b_parity[i] - (int)Stereo1->b_parity[i] ) ^ == if ( ret = (int)Stereo2->nNumberOfStereoCenters - (int)Stereo1->nNumberOfStereoCenters ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1197:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->nNumberOfStereoBonds - (int)Stereo1->nNumberOfStereoBonds ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1197:18: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->nNumberOfStereoBonds - (int)Stereo1->nNumberOfStereoBonds ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1219:26:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c :warning1197: :using the result of an assignment as a condition without parentheses [-Wparentheses] 18: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nNumberOfStereoBonds - (int)Stereo1->nNumberOfStereoBonds ) ^ == if ( ret = (Stereo2->nCompInv2Abs < 0) - (Stereo1->nCompInv2Abs < 0) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1219:26: note: place parentheses around the assignment to silence this warning if ( ret = (Stereo2->nCompInv2Abs < 0) - (Stereo1->nCompInv2Abs < 0) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1210:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1219:26: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nNumber[i] - (int)Stereo1->nNumber[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1210:26: note: place parentheses around the assignment to silence this warning if ( ret = (Stereo2->nCompInv2Abs < 0) - (Stereo1->nCompInv2Abs < 0) ) { ^ == if ( ret = (int)Stereo2->nNumber[i] - (int)Stereo1->nNumber[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1210:26: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nNumber[i] - (int)Stereo1->nNumber[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1212:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->t_parity[i] - (int)Stereo1->t_parity[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1212:26: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->t_parity[i] - (int)Stereo1->t_parity[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1212:26: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->t_parity[i] - (int)Stereo1->t_parity[i] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1215:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)Stereo2->nNumberOfStereoCenters - (int)Stereo1->nNumberOfStereoCenters ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1215:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)Stereo2->nNumberOfStereoCenters - (int)Stereo1->nNumberOfStereoCenters ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1215:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)Stereo2->nNumberOfStereoCenters - (int)Stereo1->nNumberOfStereoCenters ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1219:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (Stereo2->nCompInv2Abs < 0) - (Stereo1->nCompInv2Abs < 0) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1219:26: note: place parentheses around the assignment to silence this warning if ( ret = (Stereo2->nCompInv2Abs < 0) - (Stereo1->nCompInv2Abs < 0) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1219:26: note: use '==' to turn this assignment into an equality comparison if ( ret = (Stereo2->nCompInv2Abs < 0) - (Stereo1->nCompInv2Abs < 0) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1297:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1297:14: note: place parentheses around the assignment to silence this warning if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1297:14: note: use '==' to turn this assignment into an equality comparison if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1297:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]:1306:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1306:14: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1297:14: note: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1306:14: note: use '==' to turn this assignment into an equality comparison if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ^ ( ) if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c ^:1297:14: note: use '==' to turn this assignment into an equality comparison == if ( ret = CompareHillFormulasNoH( i1->szHillFormula, i2->szHillFormula, &num_H1, &num_H2 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1306:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1306:14: note: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1306:14: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c: if ( ret = i2->nNumberOfAtoms - i1->nNumberOfAtoms )1312 : ^18 : warning: using the result of an assignment as a condition without parentheses [-Wparentheses] == if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1312:18: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1312:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ^ ( ) if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1312:18: note: use '==' to turn this assignment into an equality comparison ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1312:18: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ^ == if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1312:18: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1318:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nAtom[i] - (int)i1->nAtom[i] ) ^ == if ( ret = i2->lenConnTable - i1->lenConnTable ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1318:14: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1318:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = i2->lenConnTable - i1->lenConnTable ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1318: if ( ret = i2->lenConnTable - i1->lenConnTable )14 : ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1318:14: note: place parentheses around the assignment to silence this warning if ( ret = i2->lenConnTable - i1->lenConnTable ) ^ == if ( ret = i2->lenConnTable - i1->lenConnTable ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1318:14: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->lenConnTable - i1->lenConnTable ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1322:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1322:18: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1322:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ^ ( ) if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1322:18: note: use '==' to turn this assignment into an equality comparison 1322:18: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ^ == if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1328:14: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1322:18: note: use '==' to turn this assignment into an equality comparison warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = num_H2 - num_H1 ) ~~~~^~~~~~~~~~~~~~~~~ if ( ret = (int)i2->nConnTable[i] - (int)i1->nConnTable[i] ) ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c :1328:14: == note: place parentheses around the assignment to silence this warning if ( ret = num_H2 - num_H1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c1328:14: note: use '==' to turn this assignment into an equality comparison :1328:14: warning: if ( ret = num_H2 - num_H1 )using the result of an assignment as a condition without parentheses [-Wparentheses] ^ == if ( ret = num_H2 - num_H1 ) ~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1328:14: note: place parentheses around the assignment to silence this warning if ( ret = num_H2 - num_H1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1328:14: note: use '==' to turn this assignment into an equality comparison if ( ret = num_H2 - num_H1 ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1344:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1344:14: note: place parentheses around the assignment to silence this warning if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1344:14:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c :warning1344: :using the result of an assignment as a condition without parentheses [-Wparentheses]14 : note: use '==' to turn this assignment into an equality comparison if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1344:14: note: place parentheses around the assignment to silence this warning if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1344:14: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1366:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = CompareTautNonIsoPartOfINChI( i1, i2) ) { ^ == if ( TAUT_NON == bTaut && (i1n && i1n->nNum_H_fixed || i2n && i2n->nNum_H_fixed) ) { ~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1366:36: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1366:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( TAUT_NON == bTaut && (i1n && i1n->nNum_H_fixed || i2n && i2n->nNum_H_fixed) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c if ( TAUT_NON == bTaut && (i1n && i1n->nNum_H_fixed || i2n && i2n->nNum_H_fixed) ) {: 1366 ~~~~^~~~~~~~~~~~~~~~~~~~ ~~: 64: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1366:36: note: place parentheses around the '&&' expression to silence this warning if ( TAUT_NON == bTaut && (i1n && i1n->nNum_H_fixed || i2n && i2n->nNum_H_fixed) ) { ~~ ~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1366:64: note: place parentheses around the '&&' expression to silence this warning if ( TAUT_NON == bTaut && (i1n && i1n->nNum_H_fixed || i2n && i2n->nNum_H_fixed) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1366:64: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( TAUT_NON == bTaut && (i1n && i1n->nNum_H_fixed || i2n && i2n->nNum_H_fixed) ) { ^ ( ) if ( TAUT_NON == bTaut && (i1n && i1n->nNum_H_fixed || i2n && i2n->nNum_H_fixed) ) { ~~ ~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1366:64: note: place parentheses around the '&&' expression to silence this warning if ( TAUT_NON == bTaut && (i1n && i1n->nNum_H_fixed || i2n && i2n->nNum_H_fixed) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1383:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2n->nNumberOfAtoms - (int)i1n->nNumberOfAtoms ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1383:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1383:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2n->nNumberOfAtoms - (int)i1n->nNumberOfAtoms ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1383:22 if ( ret = (int)i2n->nNumberOfAtoms - (int)i1n->nNumberOfAtoms ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c: note: place parentheses around the assignment to silence this warning :1383:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2n->nNumberOfAtoms - (int)i1n->nNumberOfAtoms ) { ^ ( ) if ( ret = (int)i2n->nNumberOfAtoms - (int)i1n->nNumberOfAtoms ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1383:22: note == : use '==' to turn this assignment into an equality comparison if ( ret = (int)i2n->nNumberOfAtoms - (int)i1n->nNumberOfAtoms ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1447:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1447 if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c::18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 1447:18: note: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c1447::144718::18 :note : noteuse '==' to turn this assignment into an equality comparison: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ^ if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) == ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1447:18: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfIsotopicAtoms - i1->nNumberOfIsotopicAtoms ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1452:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1452:22: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1452:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1452:22: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c: :place parentheses around the assignment to silence this warning1452 :22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ ( ) if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1452:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nAtomNumber - (int)i1->IsotopicAtom[i].nAtomNumber ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1454:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1454:22: warning if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ): using the result of an assignment as a condition without parentheses [-Wparentheses] ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1454:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1454:22: note if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ): place parentheses around the assignment to silence this warning ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1454:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1454:22: if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference )note : ^use '==' to turn this assignment into an equality comparison == if ( ret = (int)i2->IsotopicAtom[i].nIsoDifference - (int)i1->IsotopicAtom[i].nIsoDifference ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1460:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1460:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1460:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1460:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1460:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1460:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ == if ( ret = (int)i2->IsotopicAtom[i].nNum_T - (int)i1->IsotopicAtom[i].nNum_T ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1462:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1462:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1462:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1462:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1462:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1462:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ^ == if ( ret = (int)i2->IsotopicAtom[i].nNum_D - (int)i1->IsotopicAtom[i].nNum_D ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1464:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1464:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1464:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1464:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1464:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1464:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ == if ( ret = (int)i2->IsotopicAtom[i].nNum_H - (int)i1->IsotopicAtom[i].nNum_H ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1470:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1470:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = i2->nNumberOfIsotopicTGroups - i1->nNumberOfIsotopicTGroups ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1470:18: note: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfIsotopicTGroups - i1->nNumberOfIsotopicTGroups ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1470:18: note: place parentheses around the assignment to silence this warning if ( ret = i2->nNumberOfIsotopicTGroups - i1->nNumberOfIsotopicTGroups ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1470:18: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfIsotopicTGroups - i1->nNumberOfIsotopicTGroups ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1470:18: note: use '==' to turn this assignment into an equality comparison if ( ret = i2->nNumberOfIsotopicTGroups - i1->nNumberOfIsotopicTGroups ) ^ == if ( ret = i2->nNumberOfIsotopicTGroups - i1->nNumberOfIsotopicTGroups ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1474:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1474:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1474:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1474:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1474:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1474:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ^ == if ( ret = (int)i2->IsotopicTGroup[i].nTGroupNumber - (int)i1->IsotopicTGroup[i].nTGroupNumber ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1476:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1476:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1476:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1476:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1476:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1476:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ^ == if ( ret = (int)i2->IsotopicTGroup[i].nNum_T - (int)i1->IsotopicTGroup[i].nNum_T ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1478:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1478:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1478:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1478:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1478:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1478:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ^ == if ( ret = (int)i2->IsotopicTGroup[i].nNum_D - (int)i1->IsotopicTGroup[i].nNum_D ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1480:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1480:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1480:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1480:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1480:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1480:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ^ == if ( ret = (int)i2->IsotopicTGroup[i].nNum_H - (int)i1->IsotopicTGroup[i].nNum_H ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1502:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1502:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1502:14: note: place parentheses around the assignment to silence this warning if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1502:14: note: place parentheses around the assignment to silence this warning if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1502:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1502:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ^ == if ( ret = (i1->nTotalCharge? 1:0) - (i2->nTotalCharge? 1:0) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1587:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1587:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = nDesc1 - nDesc2 ) { ~~~~^~~~~~~~~~~~~~~~~ if ( ret = nDesc1 - nDesc2 ) { ~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1587/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1587:18: note: place parentheses around the assignment to silence this warning :18: note: place parentheses around the assignment to silence this warning if ( ret = nDesc1 - nDesc2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1587:18: note: use '==' to turn this assignment into an equality comparison if ( ret = nDesc1 - nDesc2 ) { ^ ( ) if ( ret = nDesc1 - nDesc2 ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1587:18: note: use '==' to turn this assignment into an equality comparison == if ( ret = nDesc1 - nDesc2 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1728:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1728:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1728:28: note: place parentheses around the assignment to silence this warning if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1728:28: note: place parentheses around the assignment to silence this warning if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1728:28: note: use '==' to turn this assignment into an equality comparison if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1728:28: note: use '==' to turn this assignment into an equality comparison if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ^ == if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1766:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1766:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1766:28: note: place parentheses around the assignment to silence this warning if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1766:28: note: place parentheses around the assignment to silence this warning if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1766:28: note: use '==' to turn this assignment into an equality comparison if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:1766:28: note: use '==' to turn this assignment into an equality comparison if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ^ == if ( nOutputString = (AT_RANK *)inchi_calloc( nTotOutputStringLen, sizeof(nOutputString[0]) ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2204:59: warning: '&&' within '||' [-Wlogical-op-parentheses] s1->nBondAtom1[j1] == s2->nBondAtom1[j2] && s1->nBondAtom2[j1] < s2->nBondAtom2[j2]) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2204:59: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2204: s1->nBondAtom1[j1] == s2->nBondAtom1[j2] && s1->nBondAtom2[j1] < s2->nBondAtom2[j2]) { ^ ( ) 59: warning: '&&' within '||' [-Wlogical-op-parentheses] s1->nBondAtom1[j1] == s2->nBondAtom1[j2] && s1->nBondAtom2[j1] < s2->nBondAtom2[j2]) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2204:59: note: place parentheses around the '&&' expression to silence this warning s1->nBondAtom1[j1] == s2->nBondAtom1[j2] && s1->nBondAtom2[j1] < s2->nBondAtom2[j2]) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2422:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2422:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = CompareReversedStereoINChI( i1->Stereo, i2->Stereo ) ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2422:14: note: place parentheses around the assignment to silence this warning if ( ret = CompareReversedStereoINChI( i1->Stereo, i2->Stereo ) ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2422:14: note: place parentheses around the assignment to silence this warning if ( ret = CompareReversedStereoINChI( i1->Stereo, i2->Stereo ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c if ( ret = CompareReversedStereoINChI( i1->Stereo, i2->Stereo ) ) ^ ( ) :2422:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2422:14: note14: note: use '==' to turn this assignment into an equality comparison : use '==' to turn this assignment into an equality comparison if ( ret = CompareReversedStereoINChI( i1->Stereo, i2->Stereo ) ) if ( ret = CompareReversedStereoINChI( i1->Stereo, i2->Stereo ) ) ^ == ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c::24332433::14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = CompareReversedStereoINChI( i1->StereoIsotopic, i2->StereoIsotopic ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2433: if ( ret = CompareReversedStereoINChI( i1->StereoIsotopic, i2->StereoIsotopic ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~14: note : place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2433:14: note: place parentheses around the assignment to silence this warning if ( ret = CompareReversedStereoINChI( i1->StereoIsotopic, i2->StereoIsotopic ) ) { ^ ( ) if ( ret = CompareReversedStereoINChI( i1->StereoIsotopic, i2->StereoIsotopic ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2433: 14: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2433:14: note: use '==' to turn this assignment into an equality comparison if ( ret = CompareReversedStereoINChI( i1->StereoIsotopic, i2->StereoIsotopic ) ) { ^ == if ( ret = CompareReversedStereoINChI( i1->StereoIsotopic, i2->StereoIsotopic ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2901:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !out_norm_data[TAUT_NON]->at && !out_norm_data[TAUT_YES]->at || !inp_at || ret ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2901:39: note: place parentheses around the '&&' expression to silence this warning if ( !out_norm_data[TAUT_NON]->at && !out_norm_data[TAUT_YES]->at || !inp_at || ret ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2901:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !out_norm_data[TAUT_NON]->at && !out_norm_data[TAUT_YES]->at || !inp_at || ret ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:2901:39: note: place parentheses around the '&&' expression to silence this warning if ( !out_norm_data[TAUT_NON]->at && !out_norm_data[TAUT_YES]->at || !inp_at || ret ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3106:53: warning: '&&' within '||' [-Wlogical-op-parentheses] 1 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[1] || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3106:53: note: place parentheses around the '&&' expression to silence this warning 1 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[1] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3107:53: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3106:53: warning: '&&' within '||' [-Wlogical-op-parentheses]: '&&' within '||' [-Wlogical-op-parentheses] 2 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[2]) ; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3107:53: note: place parentheses around the '&&' expression to silence this warning 1 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[1] || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3106:53: note: place parentheses around the '&&' expression to silence this warning 2 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[2]) ; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3104: 1 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[1] ||86: warning: '&&' within '||' [-Wlogical-op-parentheses] ^ ( ) s[TAUT_YES].nLenLinearCTTautomer > 0 && t_group_info && /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~: 3107:53: warning: '&&' within '||' [-Wlogical-op-parentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3104:86: note: place parentheses around the '&&' expression to silence this warning 2 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[2]) ; s[TAUT_YES].nLenLinearCTTautomer > 0 && t_group_info && ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3107:53: note: place parentheses around the '&&' expression to silence this warning 2 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[2]) ; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3110:83: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3104:86: warning: '&&' within '||' [-Wlogical-op-parentheses] s[TAUT_YES].nLenIsotopicEndpoints > 1 && t_group_info && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3110:83 s[TAUT_YES].nLenLinearCTTautomer > 0 && t_group_info &&: ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~note : place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3104:86: note: place parentheses around the '&&' expression to silence this warning s[TAUT_YES].nLenIsotopicEndpoints > 1 && t_group_info && ^ s[TAUT_YES].nLenLinearCTTautomer > 0 && t_group_info && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3110:83: warning: '&&' within '||' [-Wlogical-op-parentheses] s[TAUT_YES].nLenIsotopicEndpoints > 1 && t_group_info && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3110:83: note: place parentheses around the '&&' expression to silence this warning s[TAUT_YES].nLenIsotopicEndpoints > 1 && t_group_info && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3246:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret= AllocateCS( pCS, num_atoms, num_atoms, s[TAUT_NON].nLenCT, s[TAUT_NON].nLenCTAtOnly, ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3246:21: note: place parentheses around the assignment to silence this warning if ( ret= AllocateCS( pCS, num_atoms, num_atoms, s[TAUT_NON].nLenCT, s[TAUT_NON].nLenCTAtOnly, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3246:21: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3246:21: warning if ( ret= AllocateCS( pCS, num_atoms, num_atoms, s[TAUT_NON].nLenCT, s[TAUT_NON].nLenCTAtOnly,: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ == if ( ret= AllocateCS( pCS, num_atoms, num_atoms, s[TAUT_NON].nLenCT, s[TAUT_NON].nLenCTAtOnly, ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3246:21: note: place parentheses around the assignment to silence this warning if ( ret= AllocateCS( pCS, num_atoms, num_atoms, s[TAUT_NON].nLenCT, s[TAUT_NON].nLenCTAtOnly, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3246:21: note: use '==' to turn this assignment into an equality comparison if ( ret= AllocateCS( pCS, num_atoms, num_atoms, s[TAUT_NON].nLenCT, s[TAUT_NON].nLenCTAtOnly, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3270:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret= AllocateCS( pCS, num_atoms, num_at_tg, s[TAUT_YES].nLenCT, s[TAUT_YES].nLenCTAtOnly, ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3270:21: note: place parentheses around the assignment to silence this warning if ( ret= AllocateCS( pCS, num_atoms, num_at_tg, s[TAUT_YES].nLenCT, s[TAUT_YES].nLenCTAtOnly, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3270:21: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3270: if ( ret= AllocateCS( pCS, num_atoms, num_at_tg, s[TAUT_YES].nLenCT, s[TAUT_YES].nLenCTAtOnly,21 : ^ warning ==: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret= AllocateCS( pCS, num_atoms, num_at_tg, s[TAUT_YES].nLenCT, s[TAUT_YES].nLenCTAtOnly, ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3270:21: note: place parentheses around the assignment to silence this warning if ( ret= AllocateCS( pCS, num_atoms, num_at_tg, s[TAUT_YES].nLenCT, s[TAUT_YES].nLenCTAtOnly, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimake.c:3270:21: note: use '==' to turn this assignment into an equality comparison if ( ret= AllocateCS( pCS, num_atoms, num_at_tg, s[TAUT_YES].nLenCT, s[TAUT_YES].nLenCTAtOnly, ^ == 73 warnings generated. 73 warnings generated. [ 3%] [ 3%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichimap1.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichimap1.c.o [ 3%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs_static.dir/BitVect.cpp.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:167:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)LinearCTStereoDble1[i].at_num1 - (int)LinearCTStereoDble2[i].at_num1 ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:167:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)LinearCTStereoDble1[i].at_num1 - (int)LinearCTStereoDble2[i].at_num1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:167:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)LinearCTStereoDble1[i].at_num1 - (int)LinearCTStereoDble2[i].at_num1 ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:169:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)LinearCTStereoDble1[i].at_num2 - (int)LinearCTStereoDble2[i].at_num2 ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:169:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)LinearCTStereoDble1[i].at_num2 - (int)LinearCTStereoDble2[i].at_num2 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:169:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)LinearCTStereoDble1[i].at_num2 - (int)LinearCTStereoDble2[i].at_num2 ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:171:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)LinearCTStereoDble1[i].parity - (int)LinearCTStereoDble2[i].parity ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:171:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)LinearCTStereoDble1[i].parity - (int)LinearCTStereoDble2[i].parity ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:171:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)LinearCTStereoDble1[i].parity - (int)LinearCTStereoDble2[i].parity ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:167:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)LinearCTStereoDble1[i].at_num1 - (int)LinearCTStereoDble2[i].at_num1 ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:167:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)LinearCTStereoDble1[i].at_num1 - (int)LinearCTStereoDble2[i].at_num1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:167:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)LinearCTStereoDble1[i].at_num1 - (int)LinearCTStereoDble2[i].at_num1 ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:169:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)LinearCTStereoDble1[i].at_num2 - (int)LinearCTStereoDble2[i].at_num2 ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:196:22: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:169:22: note: : using the result of an assignment as a condition without parentheses [-Wparentheses]place parentheses around the assignment to silence this warning if ( ret = (int)LinearCTStereoDble1[i].at_num2 - (int)LinearCTStereoDble2[i].at_num2 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:169:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)LinearCTStereoCarb1[i].at_num - (int)LinearCTStereoCarb2[i].at_num ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:196:22: if ( ret = (int)LinearCTStereoDble1[i].at_num2 - (int)LinearCTStereoDble2[i].at_num2 ) note: place parentheses around the assignment to silence this warning ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:171:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)LinearCTStereoCarb1[i].at_num - (int)LinearCTStereoCarb2[i].at_num ) ^ ( ) if ( ret = (int)LinearCTStereoDble1[i].parity - (int)LinearCTStereoDble2[i].parity ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:171:22/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:196:22:: note: place parentheses around the assignment to silence this warning note: use '==' to turn this assignment into an equality comparison if ( ret = (int)LinearCTStereoDble1[i].parity - (int)LinearCTStereoDble2[i].parity ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c if ( ret = (int)LinearCTStereoCarb1[i].at_num - (int)LinearCTStereoCarb2[i].at_num ): 171 ^: 22 ==: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:198:22: if ( ret = (int)LinearCTStereoDble1[i].parity - (int)LinearCTStereoDble2[i].parity ) ^ ==warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)LinearCTStereoCarb1[i].parity - (int)LinearCTStereoCarb2[i].parity ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:198:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)LinearCTStereoCarb1[i].parity - (int)LinearCTStereoCarb2[i].parity ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:198:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)LinearCTStereoCarb1[i].parity - (int)LinearCTStereoCarb2[i].parity ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:196:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)LinearCTStereoCarb1[i].at_num - (int)LinearCTStereoCarb2[i].at_num ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:196:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)LinearCTStereoCarb1[i].at_num - (int)LinearCTStereoCarb2[i].at_num ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:196:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)LinearCTStereoCarb1[i].at_num - (int)LinearCTStereoCarb2[i].at_num ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:198:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)LinearCTStereoCarb1[i].parity - (int)LinearCTStereoCarb2[i].parity ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:198:22: note: place parentheses around the assignment to silence this warning if ( ret = (int)LinearCTStereoCarb1[i].parity - (int)LinearCTStereoCarb2[i].parity ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:198:22: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)LinearCTStereoCarb1[i].parity - (int)LinearCTStereoCarb2[i].parity ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:426:46: warning: '&&' within '||' [-Wlogical-op-parentheses] canon_rank1_inp == *canon_rank1_min && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:426:46: note: place parentheses around the '&&' expression to silence this warning canon_rank1_inp == *canon_rank1_min && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:426:46: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:452:46: warning: canon_rank1_inp == *canon_rank1_min && '&&' within '||' [-Wlogical-op-parentheses] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c: if ( cumulene_len%2 && !bAllene || /* 09-26-2003 */426 : ~~~~~~~~~~~~~~~~^~~~~~~~~~~ ~~ 46: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c: :place parentheses around the '&&' expression to silence this warning452 :46: note: place parentheses around the '&&' expression to silence this warning canon_rank1_inp == *canon_rank1_min && ^ if ( cumulene_len%2 && !bAllene || /* 09-26-2003 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:453:48: warning: '&&' within '||' [-Wlogical-op-parentheses] !(cumulene_len%2) && bAllene ) { /* 08-17-2003 Fix05 */ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:453:48: note: place parentheses around the '&&' expression to silence this warning !(cumulene_len%2) && bAllene ) { /* 08-17-2003 Fix05 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:452:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( cumulene_len%2 && !bAllene || /* 09-26-2003 */ ~~~~~~~~~~~~~~~~^~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:452:46: note: place parentheses around the '&&' expression to silence this warning if ( cumulene_len%2 && !bAllene || /* 09-26-2003 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:453:48: warning: '&&' within '||' [-Wlogical-op-parentheses] !(cumulene_len%2) && bAllene ) { /* 08-17-2003 Fix05 */ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:453:48: note: place parentheses around the '&&' expression to silence this warning !(cumulene_len%2) && bAllene ) { /* 08-17-2003 Fix05 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:676:29: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( num_atoms, sizeof(cur_tree->tree[0]) ) ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:676676:29: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :29: note: place parentheses around the assignment to silence this warning if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( num_atoms, sizeof(cur_tree->tree[0]) ) ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( num_atoms, sizeof(cur_tree->tree[0]) ) ) {: 676 ^: 29 ( ): note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:676:29: note: use '==' to turn this assignment into an equality comparison if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( num_atoms, sizeof(cur_tree->tree[0]) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( num_atoms, sizeof(cur_tree->tree[0]) ) ) {: 676 ^ == :29: note: use '==' to turn this assignment into an equality comparison if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( num_atoms, sizeof(cur_tree->tree[0]) ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:690:33: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:690:33: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( cur_tree->max_len + cur_tree->incr_len, sizeof(cur_tree->tree[0]) ) ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:690:33: note: place parentheses around the assignment to silence this warning if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( cur_tree->max_len + cur_tree->incr_len, sizeof(cur_tree->tree[0]) ) ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:690:33: note: place parentheses around the assignment to silence this warning if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( cur_tree->max_len + cur_tree->incr_len, sizeof(cur_tree->tree[0]) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:690:33 if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( cur_tree->max_len + cur_tree->incr_len, sizeof(cur_tree->tree[0]) ) ) { ^ : note: use '==' to turn this assignment into an equality comparison ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap1.c:690:33: note: use '==' to turn this assignment into an equality comparison if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( cur_tree->max_len + cur_tree->incr_len, sizeof(cur_tree->tree[0]) ) ) { ^ == if ( cur_tree->tree = (AT_NUMB *)inchi_calloc( cur_tree->max_len + cur_tree->incr_len, sizeof(cur_tree->tree[0]) ) ) { ^ == Scanning dependencies of target RDBoost_static Scanning dependencies of target RDBoost 10 warnings generated. 10 warnings generated. [ 3%] [ 4%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichimap2.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichimap2.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:738:16: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j > 0 && !r[0] || j > 1 && !r[1] ) ~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:738:16: note: place parentheses around the '&&' expression to silence this warning if ( j > 0 && !r[0] || j > 1 && !r[1] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:738:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j > 0 && !r[0] || j > 1 && !r[1] ) ~~ ~~~~~~^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:738:34: note: place parentheses around the '&&' expression to silence this warning if ( j > 0 && !r[0] || j > 1 && !r[1] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:741:17: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j == 2 && r[0] == r[1] || iNeigh < 0 ) { ~~~~~~~^~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:741:17: note: place parentheses around the '&&' expression to silence this warning if ( j == 2 && r[0] == r[1] || iNeigh < 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:738:16: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j > 0 && !r[0] || j > 1 && !r[1] ) ~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:738:16: note: place parentheses around the '&&' expression to silence this warning if ( j > 0 && !r[0] || j > 1 && !r[1] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:738:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j > 0 && !r[0] || j > 1 && !r[1] ) ~~ ~~~~~~^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:738:34: note: place parentheses around the '&&' expression to silence this warning if ( j > 0 && !r[0] || j > 1 && !r[1] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:741:17: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j == 2 && r[0] == r[1] || iNeigh < 0 ) { ~~~~~~~^~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:741:17: note: place parentheses around the '&&' expression to silence this warning if ( j == 2 && r[0] == r[1] || iNeigh < 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1232:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( mode == MAP_MODE_S4 && in1 || /* for S4 we need only (in1,in2) = (0,1) (0,2) (0,3) pairs of neighbors */ ~~~~~~~~~~~~~~~~~~~~~^~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1232:31: note: place parentheses around the '&&' expression to silence this warning if ( mode == MAP_MODE_S4 && in1 || /* for S4 we need only (in1,in2) = (0,1) (0,2) (0,3) pairs of neighbors */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1233:31: warning: '&&' within '||' [-Wlogical-op-parentheses] mode != MAP_MODE_STD && at[ia].valence != MAX_NUM_STEREO_ATOM_NEIGH || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1233:31: note: place parentheses around the '&&' expression to silence this warning mode != MAP_MODE_STD && at[ia].valence != MAX_NUM_STEREO_ATOM_NEIGH || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1234:31: warning: '&&' within '||' [-Wlogical-op-parentheses] mode != MAP_MODE_STD && nSymmRank[n1] != nSymmRank[n2] ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1234:31: note: place parentheses around the '&&' expression to silence this warning mode != MAP_MODE_STD && nSymmRank[n1] != nSymmRank[n2] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1254:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( mode != MAP_MODE_STD && nSymmRank[other_neigh[0]] != nSymmRank[other_neigh[1]] || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1254:31: note: place parentheses around the '&&' expression to silence this warning if ( mode != MAP_MODE_STD && nSymmRank[other_neigh[0]] != nSymmRank[other_neigh[1]] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1255:31: warning: '&&' within '||' [-Wlogical-op-parentheses] mode == MAP_MODE_S4 && nSymmRank[n1] != nSymmRank[other_neigh[1]] ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1255:31: note: place parentheses around the '&&' expression to silence this warning mode == MAP_MODE_S4 && nSymmRank[n1] != nSymmRank[other_neigh[1]] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1232:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( mode == MAP_MODE_S4 && in1 || /* for S4 we need only (in1,in2) = (0,1) (0,2) (0,3) pairs of neighbors */ ~~~~~~~~~~~~~~~~~~~~~^~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1232:31: note: place parentheses around the '&&' expression to silence this warning if ( mode == MAP_MODE_S4 && in1 || /* for S4 we need only (in1,in2) = (0,1) (0,2) (0,3) pairs of neighbors */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1233:31: warning: '&&' within '||' [-Wlogical-op-parentheses] mode != MAP_MODE_STD && at[ia].valence != MAX_NUM_STEREO_ATOM_NEIGH || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1233:31: note: place parentheses around the '&&' expression to silence this warning mode != MAP_MODE_STD && at[ia].valence != MAX_NUM_STEREO_ATOM_NEIGH || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1234:31: warning: '&&' within '||' [-Wlogical-op-parentheses] mode != MAP_MODE_STD && nSymmRank[n1] != nSymmRank[n2] ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1234:31: note: place parentheses around the '&&' expression to silence this warning mode != MAP_MODE_STD && nSymmRank[n1] != nSymmRank[n2] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1254:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( mode != MAP_MODE_STD && nSymmRank[other_neigh[0]] != nSymmRank[other_neigh[1]] || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1254:31: note: place parentheses around the '&&' expression to silence this warning if ( mode != MAP_MODE_STD && nSymmRank[other_neigh[0]] != nSymmRank[other_neigh[1]] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1255:31: warning: '&&' within '||' [-Wlogical-op-parentheses] mode == MAP_MODE_S4 && nSymmRank[n1] != nSymmRank[other_neigh[1]] ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1255:31: note: place parentheses around the '&&' expression to silence this warning mode == MAP_MODE_S4 && nSymmRank[n1] != nSymmRank[other_neigh[1]] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1880:40: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nNeighMode != NEIGH_MODE_RING && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1880:40: note: place parentheses around the '&&' expression to silence this warning if ( nNeighMode != NEIGH_MODE_RING && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1905:33: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bParitiesInverted > 0 && !(mode == MAP_MODE_C2v || mode == MAP_MODE_S4) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1905:33: note: place parentheses around the '&&' expression to silence this warning if ( bParitiesInverted > 0 && !(mode == MAP_MODE_C2v || mode == MAP_MODE_S4) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1906:33: warning: '&&' within '||' [-Wlogical-op-parentheses] bParitiesInverted == 0 && !(mode == MAP_MODE_C2 || mode == MAP_MODE_STD)) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1906:33: note: place parentheses around the '&&' expression to silence this warning bParitiesInverted == 0 && !(mode == MAP_MODE_C2 || mode == MAP_MODE_STD)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1880:40: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nNeighMode != NEIGH_MODE_RING && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1880:40: note: place parentheses around the '&&' expression to silence this warning if ( nNeighMode != NEIGH_MODE_RING && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2136:21: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( s1 && !at[i11].parity || s2 && !at[i12].parity ) { ~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2136:21: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1905:33: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( s1 && !at[i11].parity || s2 && !at[i12].parity ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2136:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bParitiesInverted > 0 && !(mode == MAP_MODE_C2v || mode == MAP_MODE_S4) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1905:33: note if ( s1 && !at[i11].parity || s2 && !at[i12].parity ) {: place parentheses around the '&&' expression to silence this warning ~~ ~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2136:46: note: place parentheses around the '&&' expression to silence this warning if ( bParitiesInverted > 0 && !(mode == MAP_MODE_C2v || mode == MAP_MODE_S4) || ^ ( ) if ( s1 && !at[i11].parity || s2 && !at[i12].parity ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1906:33: warning: '&&' within '||' [-Wlogical-op-parentheses] ( ) bParitiesInverted == 0 && !(mode == MAP_MODE_C2 || mode == MAP_MODE_STD)) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:1906:33: note: place parentheses around the '&&' expression to silence this warning bParitiesInverted == 0 && !(mode == MAP_MODE_C2 || mode == MAP_MODE_STD)) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2142:61: warning: '&&' within '||' [-Wlogical-op-parentheses] ^ ( ) if ( nNeighMode == NEIGH_MODE_RING && (i11 != i01) && (i12 != i01) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2142:61: note: place parentheses around the '&&' expression to silence this warning if ( nNeighMode == NEIGH_MODE_RING && (i11 != i01) && (i12 != i01) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2160:99: warning: '&&' within '||' [-Wlogical-op-parentheses] (parity1 == parity1orig || parity2 == parity2orig || parity1 != parity2) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2160:99: note: place parentheses around the '&&' expression to silence this warning (parity1 == parity1orig || parity2 == parity2orig || parity1 != parity2) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2162:45: warning: '&&' within '||' [-Wlogical-op-parentheses] parity1 != parity2 && (!ATOM_PARITY_WELL_DEF(parity1) || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2162:45: note: place parentheses around the '&&' expression to silence this warning parity1 != parity2 && (!ATOM_PARITY_WELL_DEF(parity1) || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2264:34: warning: '&&' within '||' [-Wlogical-op-parentheses] switch ( (i11 == cur && i12 == prev_sb_neigh || i12 == cur && i11 == prev_sb_neigh) + ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2264:34: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2136:21: warning: '&&' within '||' [-Wlogical-op-parentheses] : place parentheses around the '&&' expression to silence this warning if ( s1 && !at[i11].parity || s2 && !at[i12].parity ) { ~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2136:21 switch ( (i11 == cur && i12 == prev_sb_neigh || i12 == cur && i11 == prev_sb_neigh) + ^ ( ) :/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c :note2264: :place parentheses around the '&&' expression to silence this warning72 : warning: '&&' within '||' [-Wlogical-op-parentheses] if ( s1 && !at[i11].parity || s2 && !at[i12].parity ) { ^ ( ) switch ( (i11 == cur && i12 == prev_sb_neigh || i12 == cur && i11 == prev_sb_neigh) +/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c : ~~ ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~2136 :46: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2264:72: note: place parentheses around the '&&' expression to silence this warning if ( s1 && !at[i11].parity || s2 && !at[i12].parity ) { ~~ ~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2136:46: note: place parentheses around the '&&' expression to silence this warning switch ( (i11 == cur && i12 == prev_sb_neigh || i12 == cur && i11 == prev_sb_neigh) + ^ ( ) if ( s1 && !at[i11].parity || s2 && !at[i12].parity ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2265:34: warning: '&&' within '||' [-Wlogical-op-parentheses] (i21 == cur && i22 == prev_sb_neigh || i22 == cur && i21 == prev_sb_neigh) ) { ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2265:34:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2142:61: warning: '&&' within '||' [-Wlogical-op-parentheses] note: place parentheses around the '&&' expression to silence this warning if ( nNeighMode == NEIGH_MODE_RING && (i11 != i01) && (i12 != i01) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2142: (i21 == cur && i22 == prev_sb_neigh || i22 == cur && i21 == prev_sb_neigh) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:226561: note: place parentheses around the '&&' expression to silence this warning:72: warning: '&&' within '||' [-Wlogical-op-parentheses] (i21 == cur && i22 == prev_sb_neigh || i22 == cur && i21 == prev_sb_neigh) ) { ~~ ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2265:72: note: place parentheses around the '&&' expression to silence this warning if ( nNeighMode == NEIGH_MODE_RING && (i11 != i01) && (i12 != i01) || ^ ( ) (i21 == cur && i22 == prev_sb_neigh || i22 == cur && i21 == prev_sb_neigh) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2291:21: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2160:99: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( s1 && 0 > GetStereoNeighborPos( at, i11, i12 ) || ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2291:21: note: place parentheses around the '&&' expression to silence this warning (parity1 == parity1orig || parity2 == parity2orig || parity1 != parity2) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2160:99: if ( s1 && 0 > GetStereoNeighborPos( at, i11, i12 ) || note ^: place parentheses around the '&&' expression to silence this warning ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2292:21: warning: '&&' within '||' [-Wlogical-op-parentheses] (parity1 == parity1orig || parity2 == parity2orig || parity1 != parity2) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ s2 && 0 > GetStereoNeighborPos( at, i21, i22 ) ) { ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2292:21: note: place parentheses around the '&&' expression to silence this warning s2 && 0 > GetStereoNeighborPos( at, i21, i22 ) ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c : ( )2162 :45: warning: '&&' within '||' [-Wlogical-op-parentheses] parity1 != parity2 && (!ATOM_PARITY_WELL_DEF(parity1) || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2162:45: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2301:75: warning: parity1 != parity2 && (!ATOM_PARITY_WELL_DEF(parity1) ||'&&' within '||' [-Wlogical-op-parentheses] ^ if ( nNeighMode == NEIGH_MODE_RING && (i11 != i01 || i12 != i02) && (i11 != i02 || i12 != i01) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2301:75: note: place parentheses around the '&&' expression to silence this warning if ( nNeighMode == NEIGH_MODE_RING && (i11 != i01 || i12 != i02) && (i11 != i02 || i12 != i01) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2311:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( s1 && s2 && ((i11 != i21 || i12 != i22) && (i11 != i22 || i12 != i21) || parity1 != parity2 ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2311:58: note: place parentheses around the '&&' expression to silence this warning if ( s1 && s2 && ((i11 != i21 || i12 != i22) && (i11 != i22 || i12 != i21) || parity1 != parity2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2321:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nSymmRank[cur] == nSymmRank[i01] && nSymmRank[prev_sb_neigh] == nSymmRank[i02] || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2321:59: note: place parentheses around the '&&' expression to silence this warning if ( nSymmRank[cur] == nSymmRank[i01] && nSymmRank[prev_sb_neigh] == nSymmRank[i02] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2322:59: warning: '&&' within '||' [-Wlogical-op-parentheses] nSymmRank[cur] == nSymmRank[i02] && nSymmRank[prev_sb_neigh] == nSymmRank[i01] ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2264/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c::342322:: 59warning:: '&&' within '||' [-Wlogical-op-parentheses]note : place parentheses around the '&&' expression to silence this warning switch ( (i11 == cur && i12 == prev_sb_neigh || i12 == cur && i11 == prev_sb_neigh) + ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ~~ nSymmRank[cur] == nSymmRank[i02] && nSymmRank[prev_sb_neigh] == nSymmRank[i01] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2264:34: note: place parentheses around the '&&' expression to silence this warning switch ( (i11 == cur && i12 == prev_sb_neigh || i12 == cur && i11 == prev_sb_neigh) + ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2264:72: warning: '&&' within '||' [-Wlogical-op-parentheses] switch ( (i11 == cur && i12 == prev_sb_neigh || i12 == cur && i11 == prev_sb_neigh) + ~~ ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2264:72: note: place parentheses around the '&&' expression to silence this warning switch ( (i11 == cur && i12 == prev_sb_neigh || i12 == cur && i11 == prev_sb_neigh) + ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2265:34: warning: '&&' within '||' [-Wlogical-op-parentheses] (i21 == cur && i22 == prev_sb_neigh || i22 == cur && i21 == prev_sb_neigh) ) { ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2265:34: note: place parentheses around the '&&' expression to silence this warning (i21 == cur && i22 == prev_sb_neigh || i22 == cur && i21 == prev_sb_neigh) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2265:72: warning: '&&' within '||' [-Wlogical-op-parentheses] (i21 == cur && i22 == prev_sb_neigh || i22 == cur && i21 == prev_sb_neigh) ) { ~~ ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2265:72: note: place parentheses around the '&&' expression to silence this warning (i21 == cur && i22 == prev_sb_neigh || i22 == cur && i21 == prev_sb_neigh) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2291:21: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( s1 && 0 > GetStereoNeighborPos( at, i11, i12 ) || ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2291:21: note: place parentheses around the '&&' expression to silence this warning if ( s1 && 0 > GetStereoNeighborPos( at, i11, i12 ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2292:21: warning: '&&' within '||' [-Wlogical-op-parentheses] s2 && 0 > GetStereoNeighborPos( at, i21, i22 ) ) { ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2292:21: note: place parentheses around the '&&' expression to silence this warning s2 && 0 > GetStereoNeighborPos( at, i21, i22 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2301:75: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nNeighMode == NEIGH_MODE_RING && (i11 != i01 || i12 != i02) && (i11 != i02 || i12 != i01) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2301:75: note: place parentheses around the '&&' expression to silence this warning if ( nNeighMode == NEIGH_MODE_RING && (i11 != i01 || i12 != i02) && (i11 != i02 || i12 != i01) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2311:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( s1 && s2 && ((i11 != i21 || i12 != i22) && (i11 != i22 || i12 != i21) || parity1 != parity2 ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2311:58: note: place parentheses around the '&&' expression to silence this warning if ( s1 && s2 && ((i11 != i21 || i12 != i22) && (i11 != i22 || i12 != i21) || parity1 != parity2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2321:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nSymmRank[cur] == nSymmRank[i01] && nSymmRank[prev_sb_neigh] == nSymmRank[i02] || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2321:59: note: place parentheses around the '&&' expression to silence this warning if ( nSymmRank[cur] == nSymmRank[i01] && nSymmRank[prev_sb_neigh] == nSymmRank[i02] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2322:59: warning: '&&' within '||' [-Wlogical-op-parentheses] nSymmRank[cur] == nSymmRank[i02] && nSymmRank[prev_sb_neigh] == nSymmRank[i01] ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2322:59: note: place parentheses around the '&&' expression to silence this warning nSymmRank[cur] == nSymmRank[i02] && nSymmRank[prev_sb_neigh] == nSymmRank[i01] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2529:72: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( PARITY_ILL_DEF(at[i1].stereo_bond_parity[n1]) && PARITY_VAL(at[i1].stereo_bond_parity[n1]) > new_parity || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2529:72: note: place parentheses around the '&&' expression to silence this warning if ( PARITY_ILL_DEF(at[i1].stereo_bond_parity[n1]) && PARITY_VAL(at[i1].stereo_bond_parity[n1]) > new_parity || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2529:72: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( PARITY_ILL_DEF(at[i1].stereo_bond_parity[n1]) && PARITY_VAL(at[i1].stereo_bond_parity[n1]) > new_parity || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2529:72: note: place parentheses around the '&&' expression to silence this warning if ( PARITY_ILL_DEF(at[i1].stereo_bond_parity[n1]) && PARITY_VAL(at[i1].stereo_bond_parity[n1]) > new_parity || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2757:75: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( PARITY_ILL_DEF(at[i].stereo_atom_parity) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2757:75: note: place parentheses around the '&&' expression to silence this warning if ( PARITY_ILL_DEF(at[i].stereo_atom_parity) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2757:75: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( PARITY_ILL_DEF(at[i].stereo_atom_parity) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap2.c:2757:75: note: place parentheses around the '&&' expression to silence this warning if ( PARITY_ILL_DEF(at[i].stereo_atom_parity) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ [ 4%] [ 4%] Building CXX object Code/RDBoost/CMakeFiles/RDBoost_static.dir/Wrap.cpp.o Building CXX object Code/RDBoost/CMakeFiles/RDBoost.dir/Wrap.cpp.o 28 warnings generated. 28 warnings generated. [ 4%] [ 4%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichimap4.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichimap4.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:159:67: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pCS->bStereoIsBetter /* ??? && !pCS->bFirstCT ???*/ && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:159:67: note: place parentheses around the '&&' expression to silence this warning if ( !pCS->bStereoIsBetter /* ??? && !pCS->bFirstCT ???*/ && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:161:82: warning: '&&' within '||' [-Wlogical-op-parentheses] at_rank_canon1 == pCS->LinearCTStereoDble[nNumMappedBonds].at_num1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:161:82: note: place parentheses around the '&&' expression to silence this warning at_rank_canon1 == pCS->LinearCTStereoDble[nNumMappedBonds].at_num1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:188:27: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret1 = Next_SB_At_CanonRanks2( &at_rank_canon1_Allene, &at_rank_canon2_Allene, ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:188:27: note: place parentheses around the assignment to silence this warning if ( ret1 = Next_SB_At_CanonRanks2( &at_rank_canon1_Allene, &at_rank_canon2_Allene, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:188:27: note: use '==' to turn this assignment into an equality comparison if ( ret1 = Next_SB_At_CanonRanks2( &at_rank_canon1_Allene, &at_rank_canon2_Allene, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:205:82: warning: '&&' within '||' [-Wlogical-op-parentheses] at_rank_canon1 == pCS->LinearCTStereoDble[nNumMappedBonds].at_num1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:205:82: note: place parentheses around the '&&' expression to silence this warning at_rank_canon1 == pCS->LinearCTStereoDble[nNumMappedBonds].at_num1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:203:45: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !ret1 || !pCS->bStereoIsBetter && ~~ ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:203:45: note: place parentheses around the '&&' expression to silence this warning if ( !ret1 || !pCS->bStereoIsBetter && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:159:67: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pCS->bStereoIsBetter /* ??? && !pCS->bFirstCT ???*/ && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:159:67: note: place parentheses around the '&&' expression to silence this warning if ( !pCS->bStereoIsBetter /* ??? && !pCS->bFirstCT ???*/ && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:161:82: warning: '&&' within '||' [-Wlogical-op-parentheses] at_rank_canon1 == pCS->LinearCTStereoDble[nNumMappedBonds].at_num1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:161:82: note: place parentheses around the '&&' expression to silence this warning at_rank_canon1 == pCS->LinearCTStereoDble[nNumMappedBonds].at_num1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:188:27: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret1 = Next_SB_At_CanonRanks2( &at_rank_canon1_Allene, &at_rank_canon2_Allene, ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:188:27: note: place parentheses around the assignment to silence this warning if ( ret1 = Next_SB_At_CanonRanks2( &at_rank_canon1_Allene, &at_rank_canon2_Allene, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:188:27: note: use '==' to turn this assignment into an equality comparison if ( ret1 = Next_SB_At_CanonRanks2( &at_rank_canon1_Allene, &at_rank_canon2_Allene, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:205:82: warning: '&&' within '||' [-Wlogical-op-parentheses] at_rank_canon1 == pCS->LinearCTStereoDble[nNumMappedBonds].at_num1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:205:82: note: place parentheses around the '&&' expression to silence this warning at_rank_canon1 == pCS->LinearCTStereoDble[nNumMappedBonds].at_num1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:203:45: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !ret1 || !pCS->bStereoIsBetter && ~~ ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:203:45: note: place parentheses around the '&&' expression to silence this warning if ( !ret1 || !pCS->bStereoIsBetter && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:783:36: warning: '&&' within '||' [-Wlogical-op-parentheses] c < 0 && !pCS->bStereoIsBetter ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:783:36: note: place parentheses around the '&&' expression to silence this warning c < 0 && !pCS->bStereoIsBetter ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:783:36: warning: '&&' within '||' [-Wlogical-op-parentheses] c < 0 && !pCS->bStereoIsBetter ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:783:36: note: place parentheses around the '&&' expression to silence this warning c < 0 && !pCS->bStereoIsBetter ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1029:37: warning: '&&' within '||' [-Wlogical-op-parentheses] !pCS->bStereoIsBetter && ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1029:37: note: place parentheses around the '&&' expression to silence this warning !pCS->bStereoIsBetter && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1253:57: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( stereo_center_parity == sb_parity_calc && !EN[istk].num_to || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1253:57: note: place parentheses around the '&&' expression to silence this warning if ( stereo_center_parity == sb_parity_calc && !EN[istk].num_to || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1029:37: warning: '&&' within '||' [-Wlogical-op-parentheses] !pCS->bStereoIsBetter && ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1029:37: note: place parentheses around the '&&' expression to silence this warning !pCS->bStereoIsBetter && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1435:28: warning: '&&' within '||' [-Wlogical-op-parentheses] c < 0 && !pCS->bStereoIsBetter ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1435:28: note: place parentheses around the '&&' expression to silence this warning c < 0 && !pCS->bStereoIsBetter ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1556:25: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( UserAction && USER_ACTION_QUIT == (*UserAction)() || ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1556:25: note: place parentheses around the '&&' expression to silence this warning if ( UserAction && USER_ACTION_QUIT == (*UserAction)() || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1557:26: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c ConsoleQuit && (*ConsoleQuit)() ) {:1253:57: warning: '&&' within '||' [-Wlogical-op-parentheses] ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1557:26: note: place parentheses around the '&&' expression to silence this warning if ( stereo_center_parity == sb_parity_calc && !EN[istk].num_to || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c ConsoleQuit && (*ConsoleQuit)() ) { ^ :1253:57: note: place parentheses around the '&&' expression to silence this warning ( ) if ( stereo_center_parity == sb_parity_calc && !EN[istk].num_to || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1435:28: warning: '&&' within '||' [-Wlogical-op-parentheses] c < 0 && !pCS->bStereoIsBetter ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1435:28: note: place parentheses around the '&&' expression to silence this warning c < 0 && !pCS->bStereoIsBetter ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1556:25: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( UserAction && USER_ACTION_QUIT == (*UserAction)() || ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1556:25: note: place parentheses around the '&&' expression to silence this warning if ( UserAction && USER_ACTION_QUIT == (*UserAction)() || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1557:26: warning: '&&' within '||' [-Wlogical-op-parentheses] ConsoleQuit && (*ConsoleQuit)() ) { ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichimap4.c:1557:26: note: place parentheses around the '&&' expression to silence this warning ConsoleQuit && (*ConsoleQuit)() ) { ^ ( ) 11 warnings generated. 11 warnings generated. [ 4%] [ 4%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichinorm.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichinorm.c.o [ 4%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichiparm.c.o [ 4%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichiparm.c.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.c:77: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:740:43: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( q > pArg+k+1 && errno == ERANGE || t < 0.0 || t*1000.0 > (double)ULONG_MAX) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:740:43: note: place parentheses around the '&&' expression to silence this warning if ( q > pArg+k+1 && errno == ERANGE || t < 0.0 || t*1000.0 > (double)ULONG_MAX) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1414:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( sz = (char*) inchi_malloc( (strlen(argv[i]) + 1)*sizeof(sz[0])) ) ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1414:25: note: place parentheses around the assignment to silence this warning if ( sz = (char*) inchi_malloc( (strlen(argv[i]) + 1)*sizeof(sz[0])) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1414:25: note: use '==' to turn this assignment into an equality comparison if ( sz = (char*) inchi_malloc( (strlen(argv[i]) + 1)*sizeof(sz[0])) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1504:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( sz = (char*) inchi_malloc( (len+1)*sizeof(sz[0]) ) ) ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1504:25: note: place parentheses around the assignment to silence this warning if ( sz = (char*) inchi_malloc( (len+1)*sizeof(sz[0]) ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1504:25: note: use '==' to turn this assignment into an equality comparison if ( sz = (char*) inchi_malloc( (len+1)*sizeof(sz[0]) ) ) ^ == In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.c:77: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:740:43: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( q > pArg+k+1 && errno == ERANGE || t < 0.0 || t*1000.0 > (double)ULONG_MAX) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:740:43: note: place parentheses around the '&&' expression to silence this warning if ( q > pArg+k+1 && errno == ERANGE || t < 0.0 || t*1000.0 > (double)ULONG_MAX) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1414:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( sz = (char*) inchi_malloc( (strlen(argv[i]) + 1)*sizeof(sz[0])) ) ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1414:25: note: place parentheses around the assignment to silence this warning if ( sz = (char*) inchi_malloc( (strlen(argv[i]) + 1)*sizeof(sz[0])) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1414:25: note: use '==' to turn this assignment into an equality comparison if ( sz = (char*) inchi_malloc( (strlen(argv[i]) + 1)*sizeof(sz[0])) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1504:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( sz = (char*) inchi_malloc( (len+1)*sizeof(sz[0]) ) ) ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1504:25: note: place parentheses around the assignment to silence this warning if ( sz = (char*) inchi_malloc( (len+1)*sizeof(sz[0]) ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiparm.h:1504:25: note: use '==' to turn this assignment into an equality comparison if ( sz = (char*) inchi_malloc( (len+1)*sizeof(sz[0]) ) ) ^ == 3 warnings generated. 3 warnings generated. [ 4%] [ 5%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichiprt1.c.o Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichiprt1.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:424:28:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:424:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] warning: using the result of an assignment as a condition without parentheses [-Wparentheses] for ( p = s; p = strchr( p, q->nChar ); p ++ ) { ~~^~~~~~~~~~~~~~~~~~~~~~~ for ( p = s; p = strchr( p, q->nChar ); p ++ ) { ~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:424:28: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:424:28: for ( p = s; p = strchr( p, q->nChar ); p ++ ) { ^ ( ) note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:424:28: note: use '==' to turn this assignment into an equality comparison for ( p = s; p = strchr( p, q->nChar ); p ++ ) { ^ ( ) for ( p = s; p = strchr( p, q->nChar ); p ++ ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:424:28: note: use '==' to turn this assignment into an equality comparison for ( p = s; p = strchr( p, q->nChar ); p ++ ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:531:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( len = Needs2addXmlEntityRefs( szSdfLabel ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:531:18: note: place parentheses around the assignment to silence this warning if ( len = Needs2addXmlEntityRefs( szSdfLabel ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:531:18: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:531:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] use '==' to turn this assignment into an equality comparison if ( len = Needs2addXmlEntityRefs( szSdfLabel ) ) { if ( len = Needs2addXmlEntityRefs( szSdfLabel ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:531:18: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:532:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( len = Needs2addXmlEntityRefs( szSdfLabel ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c if ( p = (char*) inchi_malloc( len+1 ) ) {: 531 ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 18: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:532:20: note: place parentheses around the assignment to silence this warning if ( len = Needs2addXmlEntityRefs( szSdfLabel ) ) { ^ == if ( p = (char*) inchi_malloc( len+1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:532:20: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:532:20: if ( p = (char*) inchi_malloc( len+1 ) ) {warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ == if ( p = (char*) inchi_malloc( len+1 ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:532:20: note: place parentheses around the assignment to silence this warning if ( p = (char*) inchi_malloc( len+1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:532:20: note: use '==' to turn this assignment into an equality comparison if ( p = (char*) inchi_malloc( len+1 ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:537:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ == if ( len = Needs2addXmlEntityRefs( szSdfValue ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:537:18: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:537:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: place parentheses around the assignment to silence this warning if ( len = Needs2addXmlEntityRefs( szSdfValue ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( len = Needs2addXmlEntityRefs( szSdfValue ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c ( ): 537:18: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:537:18: note: use '==' to turn this assignment into an equality comparison if ( len = Needs2addXmlEntityRefs( szSdfValue ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:537:18: note if ( len = Needs2addXmlEntityRefs( szSdfValue ) ) { ^ == : use '==' to turn this assignment into an equality comparison if ( len = Needs2addXmlEntityRefs( szSdfValue ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:538:20: warning: == using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = (char*) inchi_malloc( len+1 ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:538:20: warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:538:20: note: place parentheses around the assignment to silence this warning using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = (char*) inchi_malloc( len+1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:538:20: if ( p = (char*) inchi_malloc( len+1 ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:538:20: note: place parentheses around the assignment to silence this warning if ( p = (char*) inchi_malloc( len+1 ) ) { ^ ( ) if ( p = (char*) inchi_malloc( len+1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:538:20: note: use '==' to turn this assignment into an equality comparison if ( p = (char*) inchi_malloc( len+1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:609:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( len = Needs2addXmlEntityRefs( szErrorText ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:609:14: note: place parentheses around the assignment to silence this warning if ( len = Needs2addXmlEntityRefs( szErrorText ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:609:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c14:609:14: note: use '==' to turn this assignment into an equality comparison : warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( len = Needs2addXmlEntityRefs( szErrorText ) ) { ^ == if ( len = Needs2addXmlEntityRefs( szErrorText ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:609/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:610:28: warning:: 14: note: place parentheses around the assignment to silence this warning using the result of an assignment as a condition without parentheses [-Wparentheses] if ( len = Needs2addXmlEntityRefs( szErrorText ) ) { ^ ( ) if ( pNewErrorText = (char*) inchi_malloc( len+1 ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :609:14:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:610:28: notenote: place parentheses around the assignment to silence this warning : use '==' to turn this assignment into an equality comparison if ( pNewErrorText = (char*) inchi_malloc( len+1 ) ) { if ( len = Needs2addXmlEntityRefs( szErrorText ) ) { ^ == ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:610:28: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:610:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pNewErrorText = (char*) inchi_malloc( len+1 ) ) { ^ == if ( pNewErrorText = (char*) inchi_malloc( len+1 ) ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:610:28: note: place parentheses around the assignment to silence this warning if ( pNewErrorText = (char*) inchi_malloc( len+1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:610:28: note: use '==' to turn this assignment into an equality comparison if ( pNewErrorText = (char*) inchi_malloc( len+1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1518:78: warning: '&&' within '||' [-Wlogical-op-parentheses] bCurIsoHPos = (pINChI->nPossibleLocationsOfIsotopicH && pINChI->nPossibleLocationsOfIsotopicH[0] > 1 || pINChI->lenTautomer > 1); /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1518:78: warning: '&&' within '||' [-Wlogical-op-parentheses] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1518:78: note: place parentheses around the '&&' expression to silence this warning bCurIsoHPos = (pINChI->nPossibleLocationsOfIsotopicH && pINChI->nPossibleLocationsOfIsotopicH[0] > 1 || pINChI->lenTautomer > 1); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1518:78: note: place parentheses around the '&&' expression to silence this warning bCurIsoHPos = (pINChI->nPossibleLocationsOfIsotopicH && pINChI->nPossibleLocationsOfIsotopicH[0] > 1 || pINChI->lenTautomer > 1); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1520:51: bCurIsoHPos = (pINChI->nPossibleLocationsOfIsotopicH && pINChI->nPossibleLocationsOfIsotopicH[0] > 1 || pINChI->lenTautomer > 1);warning : ^'&&' within '||' [-Wlogical-op-parentheses] ( ) bCurIsoHStereo = bCurIsoHPos && (bTautIsoHNum || bTautIsoAt) || bCurIso; ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1520:51/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:: 1520warning:: 51'&&' within '||' [-Wlogical-op-parentheses]: note: place parentheses around the '&&' expression to silence this warning bCurIsoHStereo = bCurIsoHPos && (bTautIsoHNum || bTautIsoAt) || bCurIso; ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c: bCurIsoHStereo = bCurIsoHPos && (bTautIsoHNum || bTautIsoAt) || bCurIso; ^ ( ) 1520:51: note: place parentheses around the '&&' expression to silence this warning bCurIsoHStereo = bCurIsoHPos && (bTautIsoHNum || bTautIsoAt) || bCurIso; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1591:71: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c bCurStereoSp3 = bCurRelative || bCurStereoSp3 && (pINChI->Stereo->nNumberOfStereoCenters > 1 ); /* Fix11 */: 1591 ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 71: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1591:71: note: : place parentheses around the '&&' expression to silence this warning'&&' within '||' [-Wlogical-op-parentheses] bCurStereoSp3 = bCurRelative || bCurStereoSp3 && (pINChI->Stereo->nNumberOfStereoCenters > 1 ); /* Fix11 */ ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ bCurStereoSp3 = bCurRelative || bCurStereoSp3 && (pINChI->Stereo->nNumberOfStereoCenters > 1 ); /* Fix11 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1591:71: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c bCurStereoSp3 = bCurRelative || bCurStereoSp3 && (pINChI->Stereo->nNumberOfStereoCenters > 1 ); /* Fix11 */: 1598 ^: 81 ( ): warning: '&&' within '||' [-Wlogical-op-parentheses] bCurStereoSp3 = bCurRacemic > 1 || bCurStereoSp3 && (pINChI->Stereo->nNumberOfStereoCenters > 1 ); /* Fix11 */ ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1598:81/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1598:81: note: place parentheses around the '&&' expression to silence this warning : warning: '&&' within '||' [-Wlogical-op-parentheses] bCurStereoSp3 = bCurRacemic > 1 || bCurStereoSp3 && (pINChI->Stereo->nNumberOfStereoCenters > 1 ); /* Fix11 */ ^ ( ) bCurStereoSp3 = bCurRacemic > 1 || bCurStereoSp3 && (pINChI->Stereo->nNumberOfStereoCenters > 1 ); /* Fix11 */ ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1598:81: note: place parentheses around the '&&' expression to silence this warning bCurStereoSp3 = bCurRacemic > 1 || bCurStereoSp3 && (pINChI->Stereo->nNumberOfStereoCenters > 1 ); /* Fix11 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1618:69: warning: '&&' within '||' [-Wlogical-op-parentheses] bIsotopicStereoAbsInverted[ii] |= bCurIsoStereoSp3 && (pINChI->StereoIsotopic->nCompInv2Abs < 0) || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1618:69: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1618:69: warning: '&&' within '||' [-Wlogical-op-parentheses] bIsotopicStereoAbsInverted[ii] |= bCurIsoStereoSp3 && (pINChI->StereoIsotopic->nCompInv2Abs < 0) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1620:89: warning: '&&' within '||' [-Wlogical-op-parentheses] bIsotopicStereoAbsInverted[ii] |= bCurIsoStereoSp3 && (pINChI->StereoIsotopic->nCompInv2Abs < 0) || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1618:69: note: place parentheses around the '&&' expression to silence this warning pINChI->StereoIsotopic->nCompInv2Abs && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1620:89: note: bIsotopicStereoAbsInverted[ii] |= bCurIsoStereoSp3 && (pINChI->StereoIsotopic->nCompInv2Abs < 0) ||place parentheses around the '&&' expression to silence this warning ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1620:89: warning: '&&' within '||' [-Wlogical-op-parentheses] pINChI->StereoIsotopic->nCompInv2Abs && ^ pINChI->StereoIsotopic->nCompInv2Abs && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1620:89: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1623:69: warning: '&&' within '||' [-Wlogical-op-parentheses] pINChI->StereoIsotopic->nCompInv2Abs && ^ bIsotopicStereoAbs[ii] |= bCurIsoStereoSp3 && (pINChI->StereoIsotopic->nCompInv2Abs != 0) || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1623:69: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1623:69: warning bIsotopicStereoAbs[ii] |= bCurIsoStereoSp3 && (pINChI->StereoIsotopic->nCompInv2Abs != 0) ||: '&&' within '||' [-Wlogical-op-parentheses] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1625:89: warning: '&&' within '||' [-Wlogical-op-parentheses] bIsotopicStereoAbs[ii] |= bCurIsoStereoSp3 && (pINChI->StereoIsotopic->nCompInv2Abs != 0) || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ pINChI->StereoIsotopic->nCompInv2Abs && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1623:69: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1625:89: note: place parentheses around the '&&' expression to silence this warning bIsotopicStereoAbs[ii] |= bCurIsoStereoSp3 && (pINChI->StereoIsotopic->nCompInv2Abs != 0) || ^ ( ) pINChI->StereoIsotopic->nCompInv2Abs &&/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1625:89: warning ^ : '&&' within '||' [-Wlogical-op-parentheses] pINChI->StereoIsotopic->nCompInv2Abs && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1625:89: note: place parentheses around the '&&' expression to silence this warning pINChI->StereoIsotopic->nCompInv2Abs && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1796:57: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( INCHI_REC == iINChI || INCHI_BAS == iINChI && bDisconnectedCoord ) ~~ ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1796/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1796:57::57: note: place parentheses around the '&&' expression to silence this warning warning: '&&' within '||' [-Wlogical-op-parentheses] if ( INCHI_REC == iINChI || INCHI_BAS == iINChI && bDisconnectedCoord ) ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ if ( INCHI_REC == iINChI || INCHI_BAS == iINChI && bDisconnectedCoord ) ~~ ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:1796:57: note: place parentheses around the '&&' expression to silence this warning if ( INCHI_REC == iINChI || INCHI_BAS == iINChI && bDisconnectedCoord ) ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2020:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2020:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2020:26:note: place parentheses around the assignment to silence this warning warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ^ ( ) if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c::20202020::2626:: note: place parentheses around the assignment to silence this warning note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2020:26: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ^ == if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2045:26: warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.cusing the result of an assignment as a condition without parentheses [-Wparentheses]:2045:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2045:26: ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2045:26: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) ^ ( ) if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c : ^2045 : ( )26 /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2045:26: note: use '==' to turn this assignment into an equality comparison : note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) ^ == if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2072:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ): 2072 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2072:26: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c2072:26: :2072:26: note: place parentheses around the assignment to silence this warning note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2072:26: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ^ == if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2096:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2096:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ): 2096 ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :26/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:: note: place parentheses around the assignment to silence this warning2096:26 : note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ^ ( ) if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c ( ) :2096:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2096:26: note: use '==' to turn this assignment into an equality comparison 26: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ^ if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ^ == == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2156:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_i_IATOMS] ) )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2156:26: warning ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ : using the result of an assignment as a condition without parentheses [-Wparentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c :2156:26: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_i_IATOMS] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2156: if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_i_IATOMS] ) ) ^ ( ) 26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2156:26: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_i_IATOMS] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2156:26: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_i_IATOMS] ) ) ^ == if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_i_IATOMS] ) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2182:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2182:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_h_H_ATOMS] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2182:26: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_h_H_ATOMS] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2182:26: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_h_H_ATOMS] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2182: if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_h_H_ATOMS] ) )26 : ^ note ( ): use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2182:26: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_h_H_ATOMS] ) ) ^ == if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_h_H_ATOMS] ) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c::22182218::3030: warning: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2218:30: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2218:30: noteplace parentheses around the assignment to silence this warning : place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ^ ( ) if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2218:30: ( ) note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2218:30: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ^ == if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_b_SBONDS] ) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2244:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :2244:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2244:30: ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c: :place parentheses around the assignment to silence this warning 2244:30: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ): 2244 ^: ( ) 30:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c: 2244:30: note: note: use '==' to turn this assignment into an equality comparison use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) ^ == if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_t_SATOMS] ) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2268:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2268:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2268:30: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2268:30: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2268:30: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2268:30: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ^ == if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_m_SP3INV] ) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2291:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2291:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2291:30: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2291:30: note: place parentheses around the assignment to silence this warning if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2291:30: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2291 if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ^ ==:30: note: use '==' to turn this assignment into an equality comparison if ( nSegmAction = INChI_SegmentAction( sDifSegs[nCurINChISegment][DIFS_s_STYPE] ) ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2597:61: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( INCHI_REC == iINChI || INCHI_BAS == iINChI && bDisconnectedCoord ) ~~ ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2597:61: note: place parentheses around the '&&' expression to silence this warning if ( INCHI_REC == iINChI || INCHI_BAS == iINChI && bDisconnectedCoord ) ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2597:61: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( INCHI_REC == iINChI || INCHI_BAS == iINChI && bDisconnectedCoord ) ~~ ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2597:61: note: place parentheses around the '&&' expression to silence this warning if ( INCHI_REC == iINChI || INCHI_BAS == iINChI && bDisconnectedCoord ) ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2833:68: warning: '&&' within '||' [-Wlogical-op-parentheses] bTautomericOutputAllowed && bTautomeric && bIsotopicTautEqu[iCurTautMode] || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2833:68: note: place parentheses around the '&&' expression to silence this warning bTautomericOutputAllowed && bTautomeric && bIsotopicTautEqu[iCurTautMode] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2835:33: warning: '&&' within '||' [-Wlogical-op-parentheses] bXml && ( bIgn_UU_Sp3_Iso[iCurTautMode] || bIgn_UU_Sp2_Iso[iCurTautMode] ) ) ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2835:33: note: place parentheses around the '&&' expression to silence this warning bXml && ( bIgn_UU_Sp3_Iso[iCurTautMode] || bIgn_UU_Sp2_Iso[iCurTautMode] ) ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2833:68: warning: '&&' within '||' [-Wlogical-op-parentheses] bTautomericOutputAllowed && bTautomeric && bIsotopicTautEqu[iCurTautMode] || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2833:68: note: place parentheses around the '&&' expression to silence this warning bTautomericOutputAllowed && bTautomeric && bIsotopicTautEqu[iCurTautMode] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2835:33: warning: '&&' within '||' [-Wlogical-op-parentheses] bXml && ( bIgn_UU_Sp3_Iso[iCurTautMode] || bIgn_UU_Sp2_Iso[iCurTautMode] ) ) ) ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:2835:33: note: place parentheses around the '&&' expression to silence this warning bXml && ( bIgn_UU_Sp3_Iso[iCurTautMode] || bIgn_UU_Sp2_Iso[iCurTautMode] ) ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3562:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strchr(szVal, '.') ) { ~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3562:20: note: place parentheses around the assignment to silence this warning if ( q = strchr(szVal, '.') ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3562:20: note: use '==' to turn this assignment into an equality comparison if ( q = strchr(szVal, '.') ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3614:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = (char *)memchr( szCurCoord, '\0', sizeof(szCurCoord)) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3614:20: note: place parentheses around the assignment to silence this warning if ( p = (char *)memchr( szCurCoord, '\0', sizeof(szCurCoord)) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3614:20: note: use '==' to turn this assignment into an equality comparison if ( p = (char *)memchr( szCurCoord, '\0', sizeof(szCurCoord)) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3716:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = at[j].charge ) { ~~~~^~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3716:22: note: place parentheses around the assignment to silence this warning if ( val = at[j].charge ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3716:22: note: use '==' to turn this assignment into an equality comparison if ( val = at[j].charge ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3723:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = at[j].radical ) { ~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3723:22: note: place parentheses around the assignment to silence this warning if ( val = at[j].radical ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3723:22: note: use '==' to turn this assignment into an equality comparison if ( val = at[j].radical ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3727:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = at[j].iso_atw_diff ) { ~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3727:22: note: place parentheses around the assignment to silence this warning if ( val = at[j].iso_atw_diff ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3727:22: note: use '==' to turn this assignment into an equality comparison if ( val = at[j].iso_atw_diff ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3749:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = at[j].num_iso_H[k] ) { ~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3749:30: note: place parentheses around the assignment to silence this warning if ( val = at[j].num_iso_H[k] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3749:30: note: use '==' to turn this assignment into an equality comparison if ( val = at[j].num_iso_H[k] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3562:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( q = strchr(szVal, '.') ) { ~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3562:20: note: place parentheses around the assignment to silence this warning if ( q = strchr(szVal, '.') ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3562:20: note: use '==' to turn this assignment into an equality comparison if ( q = strchr(szVal, '.') ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3614:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = (char *)memchr( szCurCoord, '\0', sizeof(szCurCoord)) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3614:20: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3911:37: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( chain_len == 1 && chain_len2 == 1 || /* regular stereobond */ if ( p = (char *)memchr( szCurCoord, '\0', sizeof(szCurCoord)) ) { ^ ( ) ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3614:20: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.cuse '==' to turn this assignment into an equality comparison :3911:37: note: place parentheses around the '&&' expression to silence this warning if ( p = (char *)memchr( szCurCoord, '\0', sizeof(szCurCoord)) ) { if ( chain_len == 1 && chain_len2 == 1 || /* regular stereobond */ ^ == ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3912:37: warning: '&&' within '||' [-Wlogical-op-parentheses] chain_len > 1 && j > pnxt_atom ) { /* j is a cumulene endpoint */ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3912:37: note: place parentheses around the '&&' expression to silence this warning chain_len > 1 && j > pnxt_atom ) { /* j is a cumulene endpoint */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3716:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = at[j].charge ) { ~~~~^~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3716:22: note: place parentheses around the assignment to silence this warning if ( val = at[j].charge ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3716:22: note: use '==' to turn this assignment into an equality comparison if ( val = at[j].charge ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3723:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = at[j].radical ) { ~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3723:22: note: place parentheses around the assignment to silence this warning if ( val = at[j].radical ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3723:22: note: use '==' to turn this assignment into an equality comparison if ( val = at[j].radical ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3727:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = at[j].iso_atw_diff ) { ~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3727:22: note: place parentheses around the assignment to silence this warning if ( val = at[j].iso_atw_diff ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3727:22: note: use '==' to turn this assignment into an equality comparison if ( val = at[j].iso_atw_diff ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3749:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = at[j].num_iso_H[k] ) { ~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3749:30: note: place parentheses around the assignment to silence this warning if ( val = at[j].num_iso_H[k] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3749:30: note: use '==' to turn this assignment into an equality comparison if ( val = at[j].num_iso_H[k] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4073:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( len = WriteOrigCoord( orig_inp_data->num_inp_atoms, ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4073:21: note: place parentheses around the assignment to silence this warning while ( len = WriteOrigCoord( orig_inp_data->num_inp_atoms, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4073:21: note: use '==' to turn this assignment into an equality comparison while ( len = WriteOrigCoord( orig_inp_data->num_inp_atoms, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4096:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( len = WriteOrigAtoms( orig_inp_data->num_inp_atoms, ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4096:17: note: place parentheses around the assignment to silence this warning while ( len = WriteOrigAtoms( orig_inp_data->num_inp_atoms, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4096:17: note: use '==' to turn this assignment into an equality comparison while ( len = WriteOrigAtoms( orig_inp_data->num_inp_atoms, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4115:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( len = WriteOrigBonds( orig_inp_data->num_inp_atoms, ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4115:17: note: place parentheses around the assignment to silence this warning while ( len = WriteOrigBonds( orig_inp_data->num_inp_atoms, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4115:17: note: use '==' to turn this assignment into an equality comparison while ( len = WriteOrigBonds( orig_inp_data->num_inp_atoms, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3911:37: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( chain_len == 1 && chain_len2 == 1 || /* regular stereobond */ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3911:37: note: place parentheses around the '&&' expression to silence this warning if ( chain_len == 1 && chain_len2 == 1 || /* regular stereobond */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3912:37: warning: '&&' within '||' [-Wlogical-op-parentheses] chain_len > 1 && j > pnxt_atom ) { /* j is a cumulene endpoint */ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:3912:37: note: place parentheses around the '&&' expression to silence this warning chain_len > 1 && j > pnxt_atom ) { /* j is a cumulene endpoint */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4073:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( len = WriteOrigCoord( orig_inp_data->num_inp_atoms, ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4073:21: note: place parentheses around the assignment to silence this warning while ( len = WriteOrigCoord( orig_inp_data->num_inp_atoms, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4073:21: note: use '==' to turn this assignment into an equality comparison while ( len = WriteOrigCoord( orig_inp_data->num_inp_atoms, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4096:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( len = WriteOrigAtoms( orig_inp_data->num_inp_atoms, ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4096:17: note: place parentheses around the assignment to silence this warning while ( len = WriteOrigAtoms( orig_inp_data->num_inp_atoms, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4096:17: note: use '==' to turn this assignment into an equality comparison while ( len = WriteOrigAtoms( orig_inp_data->num_inp_atoms, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4115:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( len = WriteOrigBonds( orig_inp_data->num_inp_atoms, ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4115:17: note: place parentheses around the assignment to silence this warning while ( len = WriteOrigBonds( orig_inp_data->num_inp_atoms, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt1.c:4115:17: note: use '==' to turn this assignment into an equality comparison while ( len = WriteOrigBonds( orig_inp_data->num_inp_atoms, ^ == 40 warnings generated. [ 5%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichiprt2.c.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.cpp:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.cpp:16: In file included from /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: 41In file included from :/sw/include/boost-1_53/boost/python/args.hpp :warning: rvalue references are a C++11 extension [-Wc++11-extensions] 25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp: shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn()10 : In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 40 warnings generated. [ 5%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichiprt2.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:175:53: warning: '&&' within '||' [-Wlogical-op-parentheses] i1->IsotopicAtom && i2->IsotopicAtom && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:175:53: note: place parentheses around the '&&' expression to silence this warning i1->IsotopicAtom && i2->IsotopicAtom && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:179:57: warning: '&&' within '||' [-Wlogical-op-parentheses] i1->IsotopicTGroup && i2->IsotopicTGroup && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:179:57: note: place parentheses around the '&&' expression to silence this warning i1->IsotopicTGroup && i2->IsotopicTGroup && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:247:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (eql1 & EQL_NUM_ISO) && !a1->bIsIsotopic || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:247:31: note: place parentheses around the '&&' expression to silence this warning if ( (eql1 & EQL_NUM_ISO) && !a1->bIsIsotopic || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:248:31: warning: '&&' within '||' [-Wlogical-op-parentheses] (eql2 & EQL_NUM_ISO) && !a2->bIsIsotopic ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:248:31: note: place parentheses around the '&&' expression to silence this warning (eql2 & EQL_NUM_ISO) && !a2->bIsIsotopic ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:531:32: warning: '&&' within '||' [-Wlogical-op-parentheses] i+1 < nLenCT && LinearCT[i+1] < (nMax=LinearCT[i])) ) { ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:531:32: note: place parentheses around the '&&' expression to silence this warning i+1 < nLenCT && LinearCT[i+1] < (nMax=LinearCT[i])) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1483:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nChar = nValue % ALPHA_BASE ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1483:20: note: place parentheses around the assignment to silence this warning if ( nChar = nValue % ALPHA_BASE ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1483:20: note: use '==' to turn this assignment into an equality comparison if ( nChar = nValue % ALPHA_BASE ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1596:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nChar = nValue % DECIMAL_BASE ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1596:20: note: place parentheses around the assignment to silence this warning if ( nChar = nValue % DECIMAL_BASE ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1596:20: note: use '==' to turn this assignment into an equality comparison if ( nChar = nValue % DECIMAL_BASE ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:175:53: warning: '&&' within '||' [-Wlogical-op-parentheses] i1->IsotopicAtom && i2->IsotopicAtom && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:175:53: note: place parentheses around the '&&' expression to silence this warning i1->IsotopicAtom && i2->IsotopicAtom && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:179:57: warning: '&&' within '||' [-Wlogical-op-parentheses] i1->IsotopicTGroup && i2->IsotopicTGroup && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:179:57: note: place parentheses around the '&&' expression to silence this warning i1->IsotopicTGroup && i2->IsotopicTGroup && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:247:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (eql1 & EQL_NUM_ISO) && !a1->bIsIsotopic || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:247:31: note: place parentheses around the '&&' expression to silence this warning if ( (eql1 & EQL_NUM_ISO) && !a1->bIsIsotopic || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:248:31: warning: '&&' within '||' [-Wlogical-op-parentheses] (eql2 & EQL_NUM_ISO) && !a2->bIsIsotopic ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:248:31: note: place parentheses around the '&&' expression to silence this warning (eql2 & EQL_NUM_ISO) && !a2->bIsIsotopic ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:531:32: warning: '&&' within '||' [-Wlogical-op-parentheses] i+1 < nLenCT && LinearCT[i+1] < (nMax=LinearCT[i])) ) { ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:531:32: note: place parentheses around the '&&' expression to silence this warning i+1 < nLenCT && LinearCT[i+1] < (nMax=LinearCT[i])) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1483:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nChar = nValue % ALPHA_BASE ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1483:20: note: place parentheses around the assignment to silence this warning if ( nChar = nValue % ALPHA_BASE ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1483:20: note: use '==' to turn this assignment into an equality comparison if ( nChar = nValue % ALPHA_BASE ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1596:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nChar = nValue % DECIMAL_BASE ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1596:20: note: place parentheses around the assignment to silence this warning if ( nChar = nValue % DECIMAL_BASE ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt2.c:1596:20: note: use '==' to turn this assignment into an equality comparison if ( nChar = nValue % DECIMAL_BASE ) { ^ == 7 warnings generated. 7 warnings generated. [ 5%] [ 6%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichiprt3.c.o Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichiprt3.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:1966::1966:55: 55warning:: '&&' within '||' [-Wlogical-op-parentheses] warning: '&&' within '||' [-Wlogical-op-parentheses] pINChI->nPossibleLocationsOfIsotopicH && pINChI->nPossibleLocationsOfIsotopicH[0] > 1) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ pINChI->nPossibleLocationsOfIsotopicH && pINChI->nPossibleLocationsOfIsotopicH[0] > 1) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:1966:55: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:1966:55: note: place parentheses around the '&&' expression to silence this warning place parentheses around the '&&' expression to silence this warning pINChI->nPossibleLocationsOfIsotopicH && pINChI->nPossibleLocationsOfIsotopicH[0] > 1) ) { pINChI->nPossibleLocationsOfIsotopicH && pINChI->nPossibleLocationsOfIsotopicH[0] > 1) ) { ^ ^ ( ) ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2595:40: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2595/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c::402595:: 40warning:: noteusing the result of an assignment as a condition without parentheses [-Wparentheses] : place parentheses around the assignment to silence this warning if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2595:40: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2595:40: note: use '==' to turn this assignment into an equality comparison if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ^ ( ) if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2595:40: note: use '==' to turn this assignment into an equality comparison if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2664:44: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2664:44: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2664:44: if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.cnote:: place parentheses around the assignment to silence this warning 2664:44: note: place parentheses around the assignment to silence this warning if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2664 if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ^ ( ) :44/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2664:: note: use '==' to turn this assignment into an equality comparison 44: note: use '==' to turn this assignment into an equality comparison if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ^ == if ( nTotalCharge_Prev = pINChI_Prev->nTotalCharge ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2672/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2672:50: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :50: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nTotalCharge_Taut_Prev = pINChI_Taut_Prev->nTotalCharge ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2672:50: if ( nTotalCharge_Taut_Prev = pINChI_Taut_Prev->nTotalCharge ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ note: place parentheses around the assignment to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c: 2672:50: note: place parentheses around the assignment to silence this warning if ( nTotalCharge_Taut_Prev = pINChI_Taut_Prev->nTotalCharge ) { ^ ( ) if ( nTotalCharge_Taut_Prev = pINChI_Taut_Prev->nTotalCharge ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2672:50: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2672:50: noteuse '==' to turn this assignment into an equality comparison: use '==' to turn this assignment into an equality comparison if ( nTotalCharge_Taut_Prev = pINChI_Taut_Prev->nTotalCharge ) { if ( nTotalCharge_Taut_Prev = pINChI_Taut_Prev->nTotalCharge ) { ^ ^ == == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2981:96: warning: '&&' within '||' [-Wlogical-op-parentheses] : (nTrans_n = (AT_NUMB *)inchi_calloc( num_components+1, sizeof(nTrans_n[0]))) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 2981:96: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2981:96: note: place parentheses around the '&&' expression to silence this warning (nTrans_n = (AT_NUMB *)inchi_calloc( num_components+1, sizeof(nTrans_n[0]))) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ (nTrans_n = (AT_NUMB *)inchi_calloc( num_components+1, sizeof(nTrans_n[0]))) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiprt3.c:2981:96: note: place parentheses around the '&&' expression to silence this warning (nTrans_n = (AT_NUMB *)inchi_calloc( num_components+1, sizeof(nTrans_n[0]))) && ^ [ 7%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs_static.dir/SparseBitVect.cpp.o Scanning dependencies of target RDGeneral_static Scanning dependencies of target RDGeneral Scanning dependencies of target RDInchiLib_static 5 warnings generated. 5 warnings generated. [ 7%] [ 7%] [ 7%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichiqueu.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichiqueu.c.o [ 7%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral_static.dir/Invariant.cpp.o Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/Invariant.cpp.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:181:72: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( endpoint_valence && (endpoint_valence > atom[iat].valence && /* added a check for negative charge or H 3-31-03 */ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:181:72: note: place parentheses around the '&&' expression to silence this warning if ( endpoint_valence && (endpoint_valence > atom[iat].valence && /* added a check for negative charge or H 3-31-03 */ ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:183:52: warning: '&&' within '||' [-Wlogical-op-parentheses] !atom[iat].charge && atom[iat].c_point) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:183:52: note: place parentheses around the '&&' expression to silence this warning !atom[iat].charge && atom[iat].c_point) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:181:72: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( endpoint_valence && (endpoint_valence > atom[iat].valence && /* added a check for negative charge or H 3-31-03 */ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:181:72: note: place parentheses around the '&&' expression to silence this warning if ( endpoint_valence && (endpoint_valence > atom[iat].valence && /* added a check for negative charge or H 3-31-03 */ ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:183:52: warning: '&&' within '||' [-Wlogical-op-parentheses] !atom[iat].charge && atom[iat].c_point) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:183:52: note: place parentheses around the '&&' expression to silence this warning !atom[iat].charge && atom[iat].c_point) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:542:30: warning: '&&' within '||' [-Wlogical-op-parentheses] nLenDfsPath && nxt_at == (int)DfsPath[nLenDfsPath-1].at_no /* step backwards */ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:542:30: note: place parentheses around the '&&' expression to silence this warning nLenDfsPath && nxt_at == (int)DfsPath[nLenDfsPath-1].at_no /* step backwards */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:542:30: warning: '&&' within '||' [-Wlogical-op-parentheses] nLenDfsPath && nxt_at == (int)DfsPath[nLenDfsPath-1].at_no /* step backwards */ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:542:30: note: place parentheses around the '&&' expression to silence this warning nLenDfsPath && nxt_at == (int)DfsPath[nLenDfsPath-1].at_no /* step backwards */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:656:73: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( BondPos[i].nAtomNumber == BondPosTmp[j].nAtomNumber && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:656:73: note: place parentheses around the '&&' expression to silence this warning if ( BondPos[i].nAtomNumber == BondPosTmp[j].nAtomNumber && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:658:75: warning: '&&' within '||' [-Wlogical-op-parentheses] BondPos[i].nAtomNumber == BondPosTmp[j+1].nAtomNumber && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:658:75: note: place parentheses around the '&&' expression to silence this warning BondPos[i].nAtomNumber == BondPosTmp[j+1].nAtomNumber && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:656:73: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( BondPos[i].nAtomNumber == BondPosTmp[j].nAtomNumber && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:656:73: note: place parentheses around the '&&' expression to silence this warning if ( BondPos[i].nAtomNumber == BondPosTmp[j].nAtomNumber && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:658:75: warning: '&&' within '||' [-Wlogical-op-parentheses] BondPos[i].nAtomNumber == BondPosTmp[j+1].nAtomNumber && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:658:75: note: place parentheses around the '&&' expression to silence this warning BondPos[i].nAtomNumber == BondPosTmp[j+1].nAtomNumber && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:53: note: place parentheses around the '&&' expression to silence this warning if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:94: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ~~ ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:94: note: place parentheses around the '&&' expression to silence this warning if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:53: warning: '&&' within '||' [-Wlogical-op-parentheses] j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:53: note: place parentheses around the '&&' expression to silence this warning j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:97: warning: '&&' within '||' [-Wlogical-op-parentheses] j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:97: note: place parentheses around the '&&' expression to silence this warning j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:27: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:27: note: place parentheses around the '&&' expression to silence this warning if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:27: warning: '&&' within '||' [-Wlogical-op-parentheses] j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:27: note: place parentheses around the '&&' expression to silence this warning j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:843:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:843:17: note: place parentheses around the assignment to silence this warning if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:843:17: note: use '==' to turn this assignment into an equality comparison if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:53: note: place parentheses around the '&&' expression to silence this warning if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:94: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ~~ ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:94: note: place parentheses around the '&&' expression to silence this warning if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:53: warning: '&&' within '||' [-Wlogical-op-parentheses] j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:53: note: place parentheses around the '&&' expression to silence this warning j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:97: warning: '&&' within '||' [-Wlogical-op-parentheses] j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:97: note: place parentheses around the '&&' expression to silence this warning j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:27: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:832:27: note: place parentheses around the '&&' expression to silence this warning if ( j == BOND_SINGLE && (!atom[o2_at].endpoint && !eif2.cDonor || !atom[o1_at].endpoint && !eif1.cAcceptor) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:27: warning: '&&' within '||' [-Wlogical-op-parentheses] j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:834:27: note: place parentheses around the '&&' expression to silence this warning j == BOND_DOUBLE && (!atom[o2_at].endpoint && !eif2.cAcceptor || !atom[o1_at].endpoint && !eif1.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:843:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:843:17: note: place parentheses around the assignment to silence this warning if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:843:17: note: use '==' to turn this assignment into an equality comparison if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1083:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1083:17: note: place parentheses around the assignment to silence this warning if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1083:17: note: use '==' to turn this assignment into an equality comparison if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1083:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1083:17: note: place parentheses around the assignment to silence this warning if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1083:17: note: use '==' to turn this assignment into an equality comparison if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1278:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1278:17: note: place parentheses around the assignment to silence this warning if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1278:17: note: use '==' to turn this assignment into an equality comparison if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1278:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1278:17: note: place parentheses around the assignment to silence this warning if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1278:17: note: use '==' to turn this assignment into an equality comparison if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:53: note: place parentheses around the '&&' expression to silence this warning if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:97: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417 if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) ||: 53 ~~ ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:97: note: place parentheses around the '&&' expression to silence this warning if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) || ^ ( ) if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:53: note:1419:53: warning: '&&' within '||' [-Wlogical-op-parentheses] : place parentheses around the '&&' expression to silence this warning i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:53: note: place parentheses around the '&&' expression to silence this warning if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) || ^ ( ) i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:97: warning: 1419:97: warning: '&&' within '||' [-Wlogical-op-parentheses] '&&' within '||' [-Wlogical-op-parentheses] if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) || ~~ ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:97: note: place parentheses around the '&&' expression to silence this warning i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:97: note: place parentheses around the '&&' expression to silence this warning if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) || ^ ( ) i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:53: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:27: warning: '&&' within '||' [-Wlogical-op-parentheses] i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:53: note if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) ||: place parentheses around the '&&' expression to silence this warning ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:27: note: place parentheses around the '&&' expression to silence this warning i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:97: warning: if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) ||'&&' within '||' [-Wlogical-op-parentheses] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:27: warning: '&&' within '||' [-Wlogical-op-parentheses] i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:97: note: place parentheses around the '&&' expression to silence this warning i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:27: note: place parentheses around the '&&' expression to silence this warning i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417: i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) {27 : ^ warning ( ): '&&' within '||' [-Wlogical-op-parentheses] if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1417:27: note: place parentheses around the '&&' expression to silence this warning if ( i == BOND_SINGLE && (!atom[n1_at].endpoint && !eif1.cDonor || !atom[n2_at].endpoint && !eif2.cAcceptor ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:27: warning: '&&' within '||' [-Wlogical-op-parentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1427:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1427: i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1419:27: note17: : place parentheses around the '&&' expression to silence this warning note: place parentheses around the assignment to silence this warning if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { i == BOND_DOUBLE && (!atom[n1_at].endpoint && !eif1.cAcceptor || !atom[n2_at].endpoint && !eif2.cDonor) ) { ^ ^ ( ) ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1427:17: note: use '==' to turn this assignment into an equality comparison if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1427:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1427:17: note: place parentheses around the assignment to silence this warning if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiqueu.c:1427:17: note: use '==' to turn this assignment into an equality comparison if (ret = (nNumBondPos > *pnNumBondPos) || (nNumEndPoint > *pnNumEndPoint)) { ^ == 21 warnings generated. [ 7%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichiring.c.o 21 warnings generated. [ 7%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichiring.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiring.c:218:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( qLen = QueueLength( q ) ) { ~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiring.c:218:18: note: place parentheses around the assignment to silence this warning while ( qLen = QueueLength( q ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiring.c:218:18: note: use '==' to turn this assignment into an equality comparison while ( qLen = QueueLength( q ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiring.c:218:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( qLen = QueueLength( q ) ) { ~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiring.c:218:18: note: place parentheses around the assignment to silence this warning while ( qLen = QueueLength( q ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiring.c:218:18: note: use '==' to turn this assignment into an equality comparison while ( qLen = QueueLength( q ) ) { ^ == 1 warning generated. 1 warning generated. [ 8%] [ 8%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichisort.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichisort.c.o [ 8%] Building CXX object External/INCHI-API/CMakeFiles/RDInchiLib_static.dir/inchi.cpp.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:157:19: warning: '&&' within '||' [-Wlogical-op-parentheses] !diff && nCanonRank[(int)*i] < nCanonRank[(int)*j]); j=i, i -- ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:157:19: note: place parentheses around the '&&' expression to silence this warning !diff && nCanonRank[(int)*i] < nCanonRank[(int)*j]); j=i, i -- ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:157:19: warning: '&&' within '||' [-Wlogical-op-parentheses] !diff && nCanonRank[(int)*i] < nCanonRank[(int)*j]); j=i, i -- ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:157:19: note: place parentheses around the '&&' expression to silence this warning !diff && nCanonRank[(int)*i] < nCanonRank[(int)*j]); j=i, i -- ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:377:13: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pp = (NEIGH_LIST *) inchi_calloc((num_atoms+1), sizeof(NEIGH_LIST)) ) { ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:377:13: note: place parentheses around the assignment to silence this warning if ( pp = (NEIGH_LIST *) inchi_calloc((num_atoms+1), sizeof(NEIGH_LIST)) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:377:13: note: use '==' to turn this assignment into an equality comparison if ( pp = (NEIGH_LIST *) inchi_calloc((num_atoms+1), sizeof(NEIGH_LIST)) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:378:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:378:22: note: place parentheses around the assignment to silence this warning if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:378:22: note: use '==' to turn this assignment into an equality comparison if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:377:13: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pp = (NEIGH_LIST *) inchi_calloc((num_atoms+1), sizeof(NEIGH_LIST)) ) { ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:377:13: note: place parentheses around the assignment to silence this warning if ( pp = (NEIGH_LIST *) inchi_calloc((num_atoms+1), sizeof(NEIGH_LIST)) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:377:13: note: use '==' to turn this assignment into an equality comparison if ( pp = (NEIGH_LIST *) inchi_calloc((num_atoms+1), sizeof(NEIGH_LIST)) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:378:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:378:22: note: place parentheses around the assignment to silence this warning if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:378:22: note: use '==' to turn this assignment into an equality comparison if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:469:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:469:22: note: place parentheses around the assignment to silence this warning if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:469:22: note: use '==' to turn this assignment into an equality comparison if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:469:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:469:22: note: place parentheses around the assignment to silence this warning if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichisort.c:469:22: note: use '==' to turn this assignment into an equality comparison if ( pAtList = (AT_NUMB *) inchi_malloc( length*sizeof(*pAtList) ) ) { ^ == 4 warnings generated. 4 warnings generated. [ 8%] [ 8%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichister.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichister.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:158:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:158:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( bFlat = (fabs(z) < ZERO_LENGTH) ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:158:16: note: place parentheses around the assignment to silence this warning if ( bFlat = (fabs(z) < ZERO_LENGTH) ) { if ( bFlat = (fabs(z) < ZERO_LENGTH) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:158:16: note: use '==' to turn this assignment into an equality comparison ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ if ( bFlat = (fabs(z) < ZERO_LENGTH) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:158:16: note: place parentheses around the assignment to silence this warning if ( bFlat = (fabs(z) < ZERO_LENGTH) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:158:16: note: use '==' to turn this assignment into an equality comparison if ( bFlat = (fabs(z) < ZERO_LENGTH) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:722:60: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( dAngle < 2.0 * ZERO_ANGLE && dAlpha > MIN_ANGLE || ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:722:60: note: place parentheses around the '&&' expression to silence this warning if ( dAngle < 2.0 * ZERO_ANGLE && dAlpha > MIN_ANGLE || ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:723:60: warning: '&&' within '||' [-Wlogical-op-parentheses] dAlpha < 2.0 * ZERO_ANGLE && dAngle > MIN_ANGLE ) ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:723:60: note: place parentheses around the '&&' expression to silence this warning dAlpha < 2.0 * ZERO_ANGLE && dAngle > MIN_ANGLE ) ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:722:60: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( dAngle < 2.0 * ZERO_ANGLE && dAlpha > MIN_ANGLE || ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:722:60: note: place parentheses around the '&&' expression to silence this warning if ( dAngle < 2.0 * ZERO_ANGLE && dAlpha > MIN_ANGLE || ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:723:60: warning: '&&' within '||' [-Wlogical-op-parentheses] dAlpha < 2.0 * ZERO_ANGLE && dAngle > MIN_ANGLE ) ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:723:60: note: place parentheses around the '&&' expression to silence this warning dAlpha < 2.0 * ZERO_ANGLE && dAngle > MIN_ANGLE ) ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1174:23: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( NumDbleBonds && NumDbleBonds > num_mult || ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1174:23: note: place parentheses around the '&&' expression to silence this warning if ( NumDbleBonds && NumDbleBonds > num_mult || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1175:24: warning: '&&' within '||' [-Wlogical-op-parentheses] !NumDbleBonds && at[cur_at].valence != num_1s ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1175:24: note: place parentheses around the '&&' expression to silence this warning !NumDbleBonds && at[cur_at].valence != num_1s ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1174:23: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( NumDbleBonds && NumDbleBonds > num_mult || ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1174:23: note: place parentheses around the '&&' expression to silence this warning if ( NumDbleBonds && NumDbleBonds > num_mult || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1175:24: warning: '&&' within '||' [-Wlogical-op-parentheses] !NumDbleBonds && at[cur_at].valence != num_1s ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1175:24: note: place parentheses around the '&&' expression to silence this warning !NumDbleBonds && at[cur_at].valence != num_1s ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1357:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( 1 == at->valence && 1 == num_H || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1357/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1357:39: warning: '&&' within '||' [-Wlogical-op-parentheses] :39 if ( 1 == at->valence && 1 == num_H || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ ~~: note: place parentheses around the '&&' expression to silence this warning if ( 1 == at->valence && 1 == num_H || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1358:39: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1357:39: note: warning: '&&' within '||' [-Wlogical-op-parentheses] place parentheses around the '&&' expression to silence this warning 2 == at->valence && 0 == num_H ) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1358:39: note: place parentheses around the '&&' expression to silence this warning 2 == at->valence && 0 == num_H ) ^ ( ) if ( 1 == at->valence && 1 == num_H || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1358:39: warning: '&&' within '||' [-Wlogical-op-parentheses] 2 == at->valence && 0 == num_H ) ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1358:39: note: place parentheses around the '&&' expression to silence this warning 2 == at->valence && 0 == num_H ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1816:32: warning: '&&' within '||' [-Wlogical-op-parentheses] !(/*(a)*/ 1 == num_nH && !num_iso_H[0] || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1816:32: note: place parentheses around the '&&' expression to silence this warning !(/*(a)*/ 1 == num_nH && !num_iso_H[0] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1817:32: warning: '&&' within '||' [-Wlogical-op-parentheses] /*(b)*/ 1 == num_H && !num_eH) ~~~~~~~~~~~~^~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1817:32: note: place parentheses around the '&&' expression to silence this warning /*(b)*/ 1 == num_H && !num_eH) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1816:32: warning: '&&' within '||' [-Wlogical-op-parentheses] !(/*(a)*/ 1 == num_nH && !num_iso_H[0] || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1816:32: note: place parentheses around the '&&' expression to silence this warning !(/*(a)*/ 1 == num_nH && !num_iso_H[0] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1817:32: warning: '&&' within '||' [-Wlogical-op-parentheses] /*(b)*/ 1 == num_H && !num_eH) ~~~~~~~~~~~~^~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:1817:32: note: place parentheses around the '&&' expression to silence this warning /*(b)*/ 1 == num_H && !num_eH) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2167:61: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[cur_at].valence ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2167:61: note: place parentheses around the '&&' expression to silence this warning if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[cur_at].valence ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2215:69: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[cur_at].valence ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2215:69: note: place parentheses around the '&&' expression to silence this warning if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[cur_at].valence ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2229:32: warning: '&&' within '||' [-Wlogical-op-parentheses] ( 2 == type_N && !bIsOxide( at, cur_at ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2229:32: note: place parentheses around the '&&' expression to silence this warning ( 2 == type_N && !bIsOxide( at, cur_at ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2230:37: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2167:61: warning 2 == type_N_next && !bIsOxide( at, next_at ) ) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2230:37: note: place parentheses around the '&&' expression to silence this warning : '&&' within '||' [-Wlogical-op-parentheses] 2 == type_N_next && !bIsOxide( at, next_at ) ) ) { ^ ( ) if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[cur_at].valence ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2167:61: note: place parentheses around the '&&' expression to silence this warning if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[cur_at].valence ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2215:69: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[cur_at].valence ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2215:69: note: place parentheses around the '&&' expression to silence this warning if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[cur_at].valence ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2229:32: warning: '&&' within '||' [-Wlogical-op-parentheses] ( 2 == type_N && !bIsOxide( at, cur_at ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2229:32: note: place parentheses around the '&&' expression to silence this warning ( 2 == type_N && !bIsOxide( at, cur_at ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2230:37: warning: '&&' within '||' [-Wlogical-op-parentheses] 2 == type_N_next && !bIsOxide( at, next_at ) ) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2230:37: note: place parentheses around the '&&' expression to silence this warning 2 == type_N_next && !bIsOxide( at, next_at ) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2573:61: warning: '&&' within '||' [-Wlogical-op-parentheses] num_wrong_bonds_2 > 1 || num_wrong_bonds_2 && 2 >= at[at_2].valence || ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2573:61: note: place parentheses around the '&&' expression to silence this warning num_wrong_bonds_2 > 1 || num_wrong_bonds_2 && 2 >= at[at_2].valence || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2590:32: warning: '&&' within '||' [-Wlogical-op-parentheses] ( 2 == type_N && !bIsOxide( at, at_1 ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2590:32: note: place parentheses around the '&&' expression to silence this warning ( 2 == type_N && !bIsOxide( at, at_1 ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2591:37: warning: '&&' within '||' [-Wlogical-op-parentheses] 2 == type_N_next && !bIsOxide( at, at_2 ) ) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2591:37: note: place parentheses around the '&&' expression to silence this warning 2 == type_N_next && !bIsOxide( at, at_2 ) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2652:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[at_1].valence ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2652:53: note: place parentheses around the '&&' expression to silence this warning if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[at_1].valence ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2573:61: warning: '&&' within '||' [-Wlogical-op-parentheses] num_wrong_bonds_2 > 1 || num_wrong_bonds_2 && 2 >= at[at_2].valence || ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2573:61: note: place parentheses around the '&&' expression to silence this warning num_wrong_bonds_2 > 1 || num_wrong_bonds_2 && 2 >= at[at_2].valence || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2590:32: warning: '&&' within '||' [-Wlogical-op-parentheses] ( 2 == type_N && !bIsOxide( at, at_1 ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2590:32: note: place parentheses around the '&&' expression to silence this warning ( 2 == type_N && !bIsOxide( at, at_1 ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2591:37: warning: '&&' within '||' [-Wlogical-op-parentheses] 2 == type_N_next && !bIsOxide( at, at_2 ) ) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2591:37: note: place parentheses around the '&&' expression to silence this warning 2 == type_N_next && !bIsOxide( at, at_2 ) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2652:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[at_1].valence ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2652:53: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2884:45: place parentheses around the '&&' expression to silence this warning warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_wrong_bonds_1 > 1 || num_wrong_bonds_1 && 2 >= at[at_1].valence ) { cur_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_1].parity)) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c ( ) :2884:45: note: place parentheses around the '&&' expression to silence this warning cur_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_1].parity)) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2889:46: warning: '&&' within '||' [-Wlogical-op-parentheses] next_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_2].parity)) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2889:46: note: place parentheses around the '&&' expression to silence this warning next_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_2].parity)) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2917:45: warning: '&&' within '||' [-Wlogical-op-parentheses] cur_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_1].parity2)) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2917:45: note: place parentheses around the '&&' expression to silence this warning cur_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_1].parity2)) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2924:46: warning: '&&' within '||' [-Wlogical-op-parentheses] next_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_2].parity2)) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2924:46: note: place parentheses around the '&&' expression to silence this warning next_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_2].parity2)) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2884:45: warning: '&&' within '||' [-Wlogical-op-parentheses] cur_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_1].parity)) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2884:45: note: place parentheses around the '&&' expression to silence this warning cur_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_1].parity)) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2889:46: warning: '&&' within '||' [-Wlogical-op-parentheses] next_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_2].parity)) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2889:46: note: place parentheses around the '&&' expression to silence this warning next_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_2].parity)) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2917:45: warning: '&&' within '||' [-Wlogical-op-parentheses] cur_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_1].parity2)) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2917:45: note: place parentheses around the '&&' expression to silence this warning cur_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_1].parity2)) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2924:46: warning: '&&' within '||' [-Wlogical-op-parentheses] next_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_2].parity2)) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:2924:46: note: place parentheses around the '&&' expression to silence this warning next_parity_defined && !ATOM_PARITY_WELL_DEF(abs(out_at[at_2].parity2)) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3403:99: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( fabs(triple_product) > ZERO_FLOAT && (min_sine > MIN_SINE || fabs(min_sine) > ZERO_FLOAT && (n2DTetrahedralAmbiguity & T2D_OKAY ) ) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3403:99: note: place parentheses around the '&&' expression to silence this warning if ( fabs(triple_product) > ZERO_FLOAT && (min_sine > MIN_SINE || fabs(min_sine) > ZERO_FLOAT && (n2DTetrahedralAmbiguity & T2D_OKAY ) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3403:99: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( fabs(triple_product) > ZERO_FLOAT && (min_sine > MIN_SINE || fabs(min_sine) > ZERO_FLOAT && (n2DTetrahedralAmbiguity & T2D_OKAY ) ) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3403:99: note: place parentheses around the '&&' expression to silence this warning if ( fabs(triple_product) > ZERO_FLOAT && (min_sine > MIN_SINE || fabs(min_sine) > ZERO_FLOAT && (n2DTetrahedralAmbiguity & T2D_OKAY ) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3699:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = ReconcileCmlIncidentBondParities( at, i, -1, visited, bDisconnected ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3699:22: note: place parentheses around the assignment to silence this warning if ( ret = ReconcileCmlIncidentBondParities( at, i, -1, visited, bDisconnected ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3699:22: note: use '==' to turn this assignment into an equality comparison if ( ret = ReconcileCmlIncidentBondParities( at, i, -1, visited, bDisconnected ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3699:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = ReconcileCmlIncidentBondParities( at, i, -1, visited, bDisconnected ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3699:22: note: place parentheses around the assignment to silence this warning if ( ret = ReconcileCmlIncidentBondParities( at, i, -1, visited, bDisconnected ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichister.c:3699:22: note: use '==' to turn this assignment into an equality comparison if ( ret = ReconcileCmlIncidentBondParities( at, i, -1, visited, bDisconnected ) ) { ^ == [ 8%] [ 8%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral_static.dir/types.cpp.o Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/types.cpp.o [ 8%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs_static.dir/ExplicitBitVect.cpp.o 23 warnings generated. 23 warnings generated. [ 9%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichitaut.c.o [ 9%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichitaut.c.o 3 warnings generated. 3 warnings generated. /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:281:44: warning: '&&' within '||' [-Wlogical-op-parentheses] if (at->charge < -1 || at->charge == 1 && !at->c_point || at->charge > 1 ) ~~ ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:281:44: note: place parentheses around the '&&' expression to silence this warning if (at->charge < -1 || at->charge == 1 && !at->c_point || at->charge > 1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:296:26: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at->charge <= 0 && at->valence == at->chem_bonds_valence || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:296:26: note: place parentheses around the '&&' expression to silence this warning if ( at->charge <= 0 && at->valence == at->chem_bonds_valence || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:298:26: warning: '&&' within '||' [-Wlogical-op-parentheses] at->charge > 0 && at->valence + 1 == at->chem_bonds_valence ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c: 281/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:298:26: note: place parentheses around the '&&' expression to silence this warning at->charge > 0 && at->valence + 1 == at->chem_bonds_valence ^ ( ) :44: warning: '&&' within '||' [-Wlogical-op-parentheses] if (at->charge < -1 || at->charge == 1 && !at->c_point || at->charge > 1 ) ~~ ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:281:44:310:26: warning: '&&' within '||' [-Wlogical-op-parentheses] note if ( at->charge <= 0 && at->valence + 1 == at->chem_bonds_valence || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ : /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:310:26: place parentheses around the '&&' expression to silence this warning note: place parentheses around the '&&' expression to silence this warning if ( at->charge <= 0 && at->valence + 1 == at->chem_bonds_valence || if (at->charge < -1 || at->charge == 1 && !at->c_point || at->charge > 1 ) ^ ( ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:311:26: warning: '&&' within '||' [-Wlogical-op-parentheses] at->charge > 0 && at->valence + 2 == at->chem_bonds_valence ) { ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:311:26: note: place parentheses around the '&&' expression to silence this warning at->charge > 0 && at->valence + 2 == at->chem_bonds_valence ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:296:26: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at->charge <= 0 && at->valence == at->chem_bonds_valence || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:296:26: note: place parentheses around the '&&' expression to silence this warning if ( at->charge <= 0 && at->valence == at->chem_bonds_valence || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:298:26: warning: '&&' within '||' [-Wlogical-op-parentheses] at->charge > 0 && at->valence + 1 == at->chem_bonds_valence ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:298:26: note: place parentheses around the '&&' expression to silence this warning at->charge > 0 && at->valence + 1 == at->chem_bonds_valence ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:310:26: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at->charge <= 0 && at->valence + 1 == at->chem_bonds_valence || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:310:26: note: place parentheses around the '&&' expression to silence this warning if ( at->charge <= 0 && at->valence + 1 == at->chem_bonds_valence || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:311:26: warning: '&&' within '||' [-Wlogical-op-parentheses] at->charge > 0 && at->valence + 2 == at->chem_bonds_valence ) { ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:311:26: note: place parentheses around the '&&' expression to silence this warning at->charge > 0 && at->valence + 2 == at->chem_bonds_valence ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:548:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( group = EndPoint[i].nGroupNumber ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:548:20: note: place parentheses around the assignment to silence this warning if ( group = EndPoint[i].nGroupNumber ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:548:20: note: use '==' to turn this assignment into an equality comparison if ( group = EndPoint[i].nGroupNumber ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:648:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( group = EndPoint[i].nGroupNumber ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:648:21: note: place parentheses around the assignment to silence this warning if ( group = EndPoint[i].nGroupNumber ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:648/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:21: note: :use '==' to turn this assignment into an equality comparison 548 if ( group = EndPoint[i].nGroupNumber ) { ^ == :20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( group = EndPoint[i].nGroupNumber ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:548:20: note: place parentheses around the assignment to silence this warning if ( group = EndPoint[i].nGroupNumber ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:548:20: note: use '==' to turn this assignment into an equality comparison if ( group = EndPoint[i].nGroupNumber ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:648:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( group = EndPoint[i].nGroupNumber ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:648:21: note: place parentheses around the assignment to silence this warning if ( group = EndPoint[i].nGroupNumber ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:648:21: note: use '==' to turn this assignment into an equality comparison/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:798: 25: if ( group = EndPoint[i].nGroupNumber ) { ^ == warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( group = at[i].endpoint ) { ~~~~~~^~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:798:25: note: place parentheses around the assignment to silence this warning if ( group = at[i].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:798:25: note: use '==' to turn this assignment into an equality comparison if ( group = at[i].endpoint ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:798:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] Linking CXX static library libRDBoost_static.a if ( group = at[i].endpoint ) { ~~~~~~^~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:798:25: note: place parentheses around the assignment to silence this warning if ( group = at[i].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:798:25: note: use '==' to turn this assignment into an equality comparison if ( group = at[i].endpoint ) { ^ == Linking CXX shared library ../../lib/libRDBoost.dylib /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:939:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( endpoint = at[rj].endpoint ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:939:35: note: place parentheses around the assignment to silence this warning if ( endpoint = at[rj].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:939:35: note: use '==' to turn this assignment into an equality comparison if ( endpoint = at[rj].endpoint ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:975:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( endpoint = at[ri].endpoint ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:975:35: note: place parentheses around the assignment to silence this warning if ( endpoint = at[ri].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:975:35: note: use '==' to turn this assignment into an equality comparison if ( endpoint = at[ri].endpoint ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:939:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( endpoint = at[rj].endpoint ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:939:35: note: place parentheses around the assignment to silence this warning if ( endpoint = at[rj].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:939:35: note: use '==' to turn this assignment into an equality comparison if ( endpoint = at[rj].endpoint ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:975:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( endpoint = at[ri].endpoint ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:975:35: note: place parentheses around the assignment to silence this warning if ( endpoint = at[ri].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:975:35: note: use '==' to turn this assignment into an equality comparison if ( endpoint = at[ri].endpoint ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1119:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nTGroupEqu[i] != nTGroupEqu[j] && (i>=nNumDiffTGroupNumbers || j>=nNumDiffTGroupNumbers) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1119:49: note: place parentheses around the '&&' expression to silence this warning if ( nTGroupEqu[i] != nTGroupEqu[j] && (i>=nNumDiffTGroupNumbers || j>=nNumDiffTGroupNumbers) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1121:33: warning: '&&' within '||' [-Wlogical-op-parentheses] !nTGroupEqu[i] && !nTGroupEqu[j] ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1121:33: note: place parentheses around the '&&' expression to silence this warning !nTGroupEqu[i] && !nTGroupEqu[j] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1119:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nTGroupEqu[i] != nTGroupEqu[j] && (i>=nNumDiffTGroupNumbers || j>=nNumDiffTGroupNumbers) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1119:49: note: place parentheses around the '&&' expression to silence this warning if ( nTGroupEqu[i] != nTGroupEqu[j] && (i>=nNumDiffTGroupNumbers || j>=nNumDiffTGroupNumbers) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1121:33: warning: '&&' within '||' [-Wlogical-op-parentheses] !nTGroupEqu[i] && !nTGroupEqu[j] ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1121:33: note: place parentheses around the '&&' expression to silence this warning !nTGroupEqu[i] && !nTGroupEqu[j] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1410:70: warning: '&&' within '||' [-Wlogical-op-parentheses] (!CType[i].num_bonds || CType[i].num_bonds==at->valence && at->nNumAtInRingSystem >= 5) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1410:70: note: place parentheses around the '&&' expression to silence this warning (!CType[i].num_bonds || CType[i].num_bonds==at->valence && at->nNumAtInRingSystem >= 5) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1428:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)c1->type - (int)c2->type ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1428:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)c1->type - (int)c2->type ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1428:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)c1->type - (int)c2->type ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1430:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)c1->subtype - (int)c2->subtype ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1430:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)c1->subtype - (int)c2->subtype ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1430:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)c1->subtype - (int)c2->subtype ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1410:70: warning: '&&' within '||' [-Wlogical-op-parentheses] (!CType[i].num_bonds || CType[i].num_bonds==at->valence && at->nNumAtInRingSystem >= 5) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1410:70: note: place parentheses around the '&&' expression to silence this warning (!CType[i].num_bonds || CType[i].num_bonds==at->valence && at->nNumAtInRingSystem >= 5) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1428:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)c1->type - (int)c2->type ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1428:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)c1->type - (int)c2->type ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1428:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)c1->type - (int)c2->type ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1430:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)c1->subtype - (int)c2->subtype ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1430:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)c1->subtype - (int)c2->subtype ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1430:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)c1->subtype - (int)c2->subtype ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1726:28: warning: '&&' within '||' [-Wlogical-op-parentheses] at[at_no].radical && at[at_no].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1726:28: note: place parentheses around the '&&' expression to silence this warning at[at_no].radical && at[at_no].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1726:28: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1728:31: warning: '&&' within '||' [-Wlogical-op-parentheses] at[at_no].radical && at[at_no].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1726:28: at[at_no].charge > 0 && !at[at_no].c_point ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.cplace parentheses around the '&&' expression to silence this warning: 1728:31: note: place parentheses around the '&&' expression to silence this warning at[at_no].charge > 0 && !at[at_no].c_point ) { ^ ( ) at[at_no].radical && at[at_no].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1728:31: warning: '&&' within '||' [-Wlogical-op-parentheses] at[at_no].charge > 0 && !at[at_no].c_point ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1728:31:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1753:25 note: place parentheses around the '&&' expression to silence this warning : warning: '&&' within '||' [-Wlogical-op-parentheses] at[at_no].charge > 0 && !at[at_no].c_point ) { ^ ( ) at[iC].radical && at[iC].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1753:25: note: place parentheses around the '&&' expression to silence this warning at[iC].radical && at[iC].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1753:25: warning: '&&' within '||' [-Wlogical-op-parentheses] at[iC].radical && at[iC].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1753:25: note: place parentheses around the '&&' expression to silence this warning at[iC].radical && at[iC].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1887:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ( eif.cAcceptor && (bond_type == BOND_DOUBLE || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1887:34: note: place parentheses around the '&&' expression to silence this warning if ( ( eif.cAcceptor && (bond_type == BOND_DOUBLE || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1891:34: warning: '&&' within '||' [-Wlogical-op-parentheses] eif.cDonor && (bond_type == BOND_SINGLE || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1891:34: note: place parentheses around the '&&' expression to silence this warning eif.cDonor && (bond_type == BOND_SINGLE || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1897:83: warning: '&&' within '||' [-Wlogical-op-parentheses] at[centerpoint].chem_bonds_valence == at[centerpoint].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1897:83: note: place parentheses around the '&&' expression to silence this warning at[centerpoint].chem_bonds_valence == at[centerpoint].valence && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1887:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ( eif.cAcceptor && (bond_type == BOND_DOUBLE || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1887:34: note: place parentheses around the '&&' expression to silence this warning if ( ( eif.cAcceptor && (bond_type == BOND_DOUBLE || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1891:34: warning: '&&' within '||' [-Wlogical-op-parentheses] eif.cDonor && (bond_type == BOND_SINGLE || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1891:34: note: place parentheses around the '&&' expression to silence this warning eif.cDonor && (bond_type == BOND_SINGLE || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1897:83: warning: '&&' within '||' [-Wlogical-op-parentheses] at[centerpoint].chem_bonds_valence == at[centerpoint].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1897:83: note: place parentheses around the '&&' expression to silence this warning at[centerpoint].chem_bonds_valence == at[centerpoint].valence &&/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1997:30: warning: '&&' within '||' [-Wlogical-op-parentheses] ^ eif.cMoveableCharge && !at[at_no].c_point || !eif.cDonor || eif.cAcceptor ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1997:30: note: place parentheses around the '&&' expression to silence this warning eif.cMoveableCharge && !at[at_no].c_point || !eif.cDonor || eif.cAcceptor ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2006:38: warning: '&&' within '||' [-Wlogical-op-parentheses] at[centerpoint].radical && at[centerpoint].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2006:38: note: place parentheses around the '&&' expression to silence this warning at[centerpoint].radical && at[centerpoint].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1997:30: warning: '&&' within '||' [-Wlogical-op-parentheses] eif.cMoveableCharge && !at[at_no].c_point || !eif.cDonor || eif.cAcceptor ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:1997:30: note: place parentheses around the '&&' expression to silence this warning eif.cMoveableCharge && !at[at_no].c_point || !eif.cDonor || eif.cAcceptor ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2006:38: warning: '&&' within '||' [-Wlogical-op-parentheses] at[centerpoint].radical && at[centerpoint].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2006:38: note: place parentheses around the '&&' expression to silence this warning at[centerpoint].radical && at[centerpoint].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2295:53: warning: '&&' within '||' [-Wlogical-op-parentheses] bAlreadyTested = (i < i1 || i == i1 && j <= j1); ~~ ~~~~~~~~^~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2295:53: note: place parentheses around the '&&' expression to silence this warning bAlreadyTested = (i < i1 || i == i1 && j <= j1); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2296:37: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bAlreadyTested && (cPAIR(i,j) & ACCEPTOR_PAIR) || !bAlreadyTested ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2296:37: note: place parentheses around the '&&' expression to silence this warning if ( bAlreadyTested && (cPAIR(i,j) & ACCEPTOR_PAIR) || !bAlreadyTested ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2338:37: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bAlreadyTested && (cPAIR(i,j) & DONOR_PAIR) || !bAlreadyTested ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2338:37: note: place parentheses around the '&&' expression to silence this warning if ( bAlreadyTested && (cPAIR(i,j) & DONOR_PAIR) || !bAlreadyTested ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2295:53: warning: '&&' within '||' [-Wlogical-op-parentheses] bAlreadyTested = (i < i1 || i == i1 && j <= j1); ~~ ~~~~~~~~^~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2295:53: note: place parentheses around the '&&' expression to silence this warning bAlreadyTested = (i < i1 || i == i1 && j <= j1); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2296:37: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bAlreadyTested && (cPAIR(i,j) & ACCEPTOR_PAIR) || !bAlreadyTested ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2296:37: note: place parentheses around the '&&' expression to silence this warning if ( bAlreadyTested && (cPAIR(i,j) & ACCEPTOR_PAIR) || !bAlreadyTested ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2338:37: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bAlreadyTested && (cPAIR(i,j) & DONOR_PAIR) || !bAlreadyTested ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2338:37: note: place parentheses around the '&&' expression to silence this warning if ( bAlreadyTested && (cPAIR(i,j) & DONOR_PAIR) || !bAlreadyTested ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2940:48: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasAcidicHydrogen( at, i) && ((s_type=3), (s_subtype = SALT_p_DONOR)) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2940:48: note: place parentheses around the '&&' expression to silence this warning bHasAcidicHydrogen( at, i) && ((s_type=3), (s_subtype = SALT_p_DONOR)) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2941:48: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasAcidicMinus( at, i) && ((s_type=3), (s_subtype = SALT_p_ACCEPTOR)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2941:48: note: place parentheses around the '&&' expression to silence this warning bHasAcidicMinus( at, i) && ((s_type=3), (s_subtype = SALT_p_ACCEPTOR)) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2954:50: warning: '&&' within '||' [-Wlogical-op-parentheses] (s_subtype & SALT_ACCEPTOR) && !at[i].endpoint ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2954:50: note: place parentheses around the '&&' expression to silence this warning (s_subtype & SALT_ACCEPTOR) && !at[i].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2988:91: warning: '&&' within '||' [-Wlogical-op-parentheses] (!(s_subtype_all & SALT_DONOR_Neg2) || !(s_subtype_all & SALT_DONOR_H2)) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2988:91: note: place parentheses around the '&&' expression to silence this warning (!(s_subtype_all & SALT_DONOR_Neg2) || !(s_subtype_all & SALT_DONOR_H2)) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2940:48: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasAcidicHydrogen( at, i) && ((s_type=3), (s_subtype = SALT_p_DONOR)) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2940:48: note: place parentheses around the '&&' expression to silence this warning bHasAcidicHydrogen( at, i) && ((s_type=3), (s_subtype = SALT_p_DONOR)) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2941:48: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasAcidicMinus( at, i) && ((s_type=3), (s_subtype = SALT_p_ACCEPTOR)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2941:48: note: place parentheses around the '&&' expression to silence this warning bHasAcidicMinus( at, i) && ((s_type=3), (s_subtype = SALT_p_ACCEPTOR)) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2954:50: warning: '&&' within '||' [-Wlogical-op-parentheses] (s_subtype & SALT_ACCEPTOR) && !at[i].endpoint ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2954:50: note: place parentheses around the '&&' expression to silence this warning (s_subtype & SALT_ACCEPTOR) && !at[i].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2988:91: warning: '&&' within '||' [-Wlogical-op-parentheses] (!(s_subtype_all & SALT_DONOR_Neg2) || !(s_subtype_all & SALT_DONOR_H2)) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:2988:91: note: place parentheses around the '&&' expression to silence this warning (!(s_subtype_all & SALT_DONOR_Neg2) || !(s_subtype_all & SALT_DONOR_H2)) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3122:45: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasAcidicHydrogen( at, i) && ((s_type=3), (s_subtype = SALT_p_DONOR)) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3122:45: note: place parentheses around the '&&' expression to silence this warning bHasAcidicHydrogen( at, i) && ((s_type=3), (s_subtype = SALT_p_DONOR)) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3123:45: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasAcidicMinus( at, i) && ((s_type=3), (s_subtype = SALT_p_ACCEPTOR)) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3123:45: note: place parentheses around the '&&' expression to silence this warning bHasAcidicMinus( at, i) && ((s_type=3), (s_subtype = SALT_p_ACCEPTOR)) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3124:48: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasOtherExchangableH (at, i) && ((s_type=3), (s_subtype = SALT_DONOR_H)) ) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3124:48: note: place parentheses around the '&&' expression to silence this warning bHasOtherExchangableH (at, i) && ((s_type=3), (s_subtype = SALT_DONOR_H)) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3104:24: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bHasH && at[i].endpoint || /* tautomeric atoms */ ~~~~~~^~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3104:24: note: place parentheses around the '&&' expression to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3122:45 : warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bHasH && at[i].endpoint || /* tautomeric atoms */ ^ ( ) bHasAcidicHydrogen( at, i) && ((s_type=3), (s_subtype = SALT_p_DONOR)) || /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 3110:24: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3122:45: note: place parentheses around the '&&' expression to silence this warning bHasH && ~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3110:24: note: place parentheses around the '&&' expression to silence this warning bHasH && ^ bHasAcidicHydrogen( at, i) && ((s_type=3), (s_subtype = SALT_p_DONOR)) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3123:45: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasAcidicMinus( at, i) && ((s_type=3), (s_subtype = SALT_p_ACCEPTOR)) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3123:45: note: place parentheses around the '&&' expression to silence this warning bHasAcidicMinus( at, i) && ((s_type=3), (s_subtype = SALT_p_ACCEPTOR)) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3124:48: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasOtherExchangableH (at, i) && ((s_type=3), (s_subtype = SALT_DONOR_H)) ) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3124:48: note: place parentheses around the '&&' expression to silence this warning bHasOtherExchangableH (at, i) && ((s_type=3), (s_subtype = SALT_DONOR_H)) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3104:24: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bHasH && at[i].endpoint || /* tautomeric atoms */ ~~~~~~^~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3104:24: note: place parentheses around the '&&' expression to silence this warning if ( bHasH && at[i].endpoint || /* tautomeric atoms */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3110:24: warning: '&&' within '||' [-Wlogical-op-parentheses] bHasH && ~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3110:24: note: place parentheses around the '&&' expression to silence this warning bHasH && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3280:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( endpoint_valence = nGetEndpointInfo( at, i, &eif1 ) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3280:31: note: place parentheses around the assignment to silence this warning if ( endpoint_valence = nGetEndpointInfo( at, i, &eif1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3280:31: note: use '==' to turn this assignment into an equality comparison if ( endpoint_valence = nGetEndpointInfo( at, i, &eif1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3280:31: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( endpoint_valence = nGetEndpointInfo( at, i, &eif1 ) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3280:31: note: place parentheses around the assignment to silence this warning if ( endpoint_valence = nGetEndpointInfo( at, i, &eif1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3280:31: note: use '==' to turn this assignment into an equality comparison if ( endpoint_valence = nGetEndpointInfo( at, i, &eif1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3424:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( endpoint_valence = nGetEndpointInfo_KET( at, i, &eif1 ) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3424:35: note: place parentheses around the assignment to silence this warning if ( endpoint_valence = nGetEndpointInfo_KET( at, i, &eif1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3424:35: note: use '==' to turn this assignment into an equality comparison if ( endpoint_valence = nGetEndpointInfo_KET( at, i, &eif1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3424:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( endpoint_valence = nGetEndpointInfo_KET( at, i, &eif1 ) ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3424:35: note: place parentheses around the assignment to silence this warning if ( endpoint_valence = nGetEndpointInfo_KET( at, i, &eif1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3424:35: note: use '==' to turn this assignment into an equality comparison if ( endpoint_valence = nGetEndpointInfo_KET( at, i, &eif1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3735:52: warning: '&&' within '||' [-Wlogical-op-parentheses] bond_type != BOND_ALT12NS && ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3735:52: note: place parentheses around the '&&' expression to silence this warning bond_type != BOND_ALT12NS && ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3735:52: warning: '&&' within '||' [-Wlogical-op-parentheses] bond_type != BOND_ALT12NS && ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:3735:52: note: place parentheses around the '&&' expression to silence this warning bond_type != BOND_ALT12NS && ~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4030:39: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (t_group_info->t_group = ~~~~~~~~~~~~~~~~~~~~~~^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4030:39: note: place parentheses around the assignment to silence this warning if (t_group_info->t_group = ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4030:39: note: use '==' to turn this assignment into an equality comparison if (t_group_info->t_group = ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4040:51: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (t_group_info->nEndpointAtomNumber = ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4040:51: note: place parentheses around the assignment to silence this warning if (t_group_info->nEndpointAtomNumber = ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4040:51: note: use '==' to turn this assignment into an equality comparison if (t_group_info->nEndpointAtomNumber = ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4050:44: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (t_group_info->tGroupNumber = ~~~~~~~~~~~~~~~~~~~~~~~~~~~^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4050:44: note: place parentheses around the assignment to silence this warning if (t_group_info->tGroupNumber = ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4050:44: note: use '==' to turn this assignment into an equality comparison if (t_group_info->tGroupNumber = ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4030:39: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (t_group_info->t_group = ~~~~~~~~~~~~~~~~~~~~~~^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4060:59:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4030:39: note: place parentheses around the assignment to silence this warning warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (t_group_info->nIsotopicEndpointAtomNumber = ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4060:59: note: place parentheses around the assignment to silence this warning if (t_group_info->t_group = ^ if (t_group_info->nIsotopicEndpointAtomNumber = ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4030:39: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c: :use '==' to turn this assignment into an equality comparison4060 :59: note: use '==' to turn this assignment into an equality comparison if (t_group_info->t_group = ^ == if (t_group_info->nIsotopicEndpointAtomNumber = ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4040:51: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (t_group_info->nEndpointAtomNumber = ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4040:51: note: place parentheses around the assignment to silence this warning if (t_group_info->nEndpointAtomNumber = ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4040:51: note: use '==' to turn this assignment into an equality comparison if (t_group_info->nEndpointAtomNumber = ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4050:44: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (t_group_info->tGroupNumber = ~~~~~~~~~~~~~~~~~~~~~~~~~~~^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4050:44: note: place parentheses around the assignment to silence this warning if (t_group_info->tGroupNumber = ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4050:44: note: use '==' to turn this assignment into an equality comparison if (t_group_info->tGroupNumber = ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4060:59: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (t_group_info->nIsotopicEndpointAtomNumber = ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4060:59: note: place parentheses around the assignment to silence this warning if (t_group_info->nIsotopicEndpointAtomNumber = ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4060:59: note: use '==' to turn this assignment into an equality comparison if (t_group_info->nIsotopicEndpointAtomNumber = ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4277:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( j = (int)at[i].endpoint ) { ~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4277:16: note: place parentheses around the assignment to silence this warning if ( j = (int)at[i].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4277:16: note: use '==' to turn this assignment into an equality comparison if ( j = (int)at[i].endpoint ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4277:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( j = (int)at[i].endpoint ) { ~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4277:16: note: place parentheses around the assignment to silence this warning if ( j = (int)at[i].endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4277:16: note: use '==' to turn this assignment into an equality comparison4313:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( j = (int)at[i].endpoint ) { ^ == t_group_info->nNumIsotopicEndpoints>1 && (t_group_info->bTautFlagsDone & (TG_FLAG_FOUND_ISOTOPIC_H_DONE | TG_FLAG_FOUND_ISOTOPIC_ATOM_DONE))) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4313:58: note: place parentheses around the '&&' expression to silence this warning t_group_info->nNumIsotopicEndpoints>1 && (t_group_info->bTautFlagsDone & (TG_FLAG_FOUND_ISOTOPIC_H_DONE | TG_FLAG_FOUND_ISOTOPIC_ATOM_DONE))) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4313:58: warning: '&&' within '||' [-Wlogical-op-parentheses] t_group_info->nNumIsotopicEndpoints>1 && (t_group_info->bTautFlagsDone & (TG_FLAG_FOUND_ISOTOPIC_H_DONE | TG_FLAG_FOUND_ISOTOPIC_ATOM_DONE))) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichitaut.c:4313:58: note: place parentheses around the '&&' expression to silence this warning t_group_info->nNumIsotopicEndpoints>1 && (t_group_info->bTautFlagsDone & (TG_FLAG_FOUND_ISOTOPIC_H_DONE | TG_FLAG_FOUND_ISOTOPIC_ATOM_DONE))) ) { ^ ( ) [ 9%] Built target RDBoost_static [ 9%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral_static.dir/utils.cpp.o 44 warnings generated. [ 9%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichi_bns.c.o 44 warnings generated. [ 9%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichi_bns.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:735:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:735:3636: warning: : '&&' within '||' [-Wlogical-op-parentheses]warning: '&&' within '||' [-Wlogical-op-parentheses] ( v0 >= num_atoms && ( pBNS->vert[v0].type & BNS_VERT_TYPE_C_GROUP ) || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ ( v0 >= num_atoms && ( pBNS->vert[v0].type & BNS_VERT_TYPE_C_GROUP ) || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:735:36: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.cplace parentheses around the '&&' expression to silence this warning:735 :36: note: place parentheses around the '&&' expression to silence this warning ( v0 >= num_atoms && ( pBNS->vert[v0].type & BNS_VERT_TYPE_C_GROUP ) || ^ ( v0 >= num_atoms && ( pBNS->vert[v0].type & BNS_VERT_TYPE_C_GROUP ) || ( ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:736:36: warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:736:36'&&' within '||' [-Wlogical-op-parentheses] : warning: '&&' within '||' [-Wlogical-op-parentheses] v2 >= num_atoms && ( pBNS->vert[v2].type & BNS_VERT_TYPE_C_GROUP ) ) ) { ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ v2 >= num_atoms && ( pBNS->vert[v2].type & BNS_VERT_TYPE_C_GROUP ) ) ) { ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:736:36: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c: :place parentheses around the '&&' expression to silence this warning736:36: note: place parentheses around the '&&' expression to silence this warning v2 >= num_atoms && ( pBNS->vert[v2].type & BNS_VERT_TYPE_C_GROUP ) ) ) { ^ ( ) v2 >= num_atoms && ( pBNS->vert[v2].type & BNS_VERT_TYPE_C_GROUP ) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1192:26: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( 0 <= v1 && v1 == nEnd1 || v1 == nEnd2 && 0 <= v2 && v2 < num_atoms ) { ~~~~~~~~^~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1192:26: note: place parentheses around the '&&' expression to silence this warning if ( 0 <= v1 && v1 == nEnd1 || v1 == nEnd2 && 0 <= v2 && v2 < num_atoms ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1192:67: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c: if ( 0 <= v1 && v1 == nEnd1 || v1 == nEnd2 && 0 <= v2 && v2 < num_atoms ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ 1192:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.cwarning: '&&' within '||' [-Wlogical-op-parentheses] :1192:67: note: place parentheses around the '&&' expression to silence this warning if ( 0 <= v1 && v1 == nEnd1 || v1 == nEnd2 && 0 <= v2 && v2 < num_atoms ) { if ( 0 <= v1 && v1 == nEnd1 || v1 == nEnd2 && 0 <= v2 && v2 < num_atoms ) { ~~~~~~~~^~~~~~~~~~~~~~ ~~ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1192:26: note: place parentheses around the '&&' expression to silence this warning if ( 0 <= v1 && v1 == nEnd1 || v1 == nEnd2 && 0 <= v2 && v2 < num_atoms ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1192:67/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1199:26: warning: : warning: '&&' within '||' [-Wlogical-op-parentheses] '&&' within '||' [-Wlogical-op-parentheses] if ( 0 <= v2 && v2 == nEnd1 || v2 == nEnd2 && 0 <= v1 && v1 < num_atoms ) { ~~~~~~~~^~~~~~~~~~~~~~ ~~ if ( 0 <= v1 && v1 == nEnd1 || v1 == nEnd2 && 0 <= v2 && v2 < num_atoms ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1199:26: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1192:67: note: place parentheses around the '&&' expression to silence this warning if ( 0 <= v2 && v2 == nEnd1 || v2 == nEnd2 && 0 <= v1 && v1 < num_atoms ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c if ( 0 <= v1 && v1 == nEnd1 || v1 == nEnd2 && 0 <= v2 && v2 < num_atoms ) {: 1199:67: warning: '&&' within '||' [-Wlogical-op-parentheses] ^ ( ) if ( 0 <= v2 && v2 == nEnd1 || v2 == nEnd2 && 0 <= v1 && v1 < num_atoms ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1199:67: note: place parentheses around the '&&' expression to silence this warning if ( 0 <= v2 && v2 == nEnd1 || v2 == nEnd2 && 0 <= v1 && v1 < num_atoms ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1199:26: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( 0 <= v2 && v2 == nEnd1 || v2 == nEnd2 && 0 <= v1 && v1 < num_atoms ) { ~~~~~~~~^~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1199:26: note: place parentheses around the '&&' expression to silence this warning if ( 0 <= v2 && v2 == nEnd1 || v2 == nEnd2 && 0 <= v1 && v1 < num_atoms ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c::1218:36: warning: '&&' within '||' [-Wlogical-op-parentheses] 1199:67: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( cDelta[j] > 0 && cDelta[i] > 0 || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1218:36: if ( 0 <= v2 && v2 == nEnd1 || v2 == nEnd2 && 0 <= v1 && v1 < num_atoms ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.cnote:: 1199place parentheses around the '&&' expression to silence this warning: 67: note: place parentheses around the '&&' expression to silence this warning if ( cDelta[j] > 0 && cDelta[i] > 0 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c if ( 0 <= v2 && v2 == nEnd1 || v2 == nEnd2 && 0 <= v1 && v1 < num_atoms ) { ^ ( ) :1219:36: warning: '&&' within '||' [-Wlogical-op-parentheses] cDelta[j] < 0 && cDelta[i] < 0 ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1219:36: note: place parentheses around the '&&' expression to silence this warning cDelta[j] < 0 && cDelta[i] < 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1218:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( cDelta[j] > 0 && cDelta[i] > 0 || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1218/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1249:36: warning: :36: note: place parentheses around the '&&' expression to silence this warning '&&' within '||' [-Wlogical-op-parentheses] if ( cDelta[j] > 0 && cDelta[i] > 0 || ^ if ( cDelta[j] > 0 && cDelta[i] > 0 || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ ~~ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1249:36: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1219:place parentheses around the '&&' expression to silence this warning 36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( cDelta[j] > 0 && cDelta[i] > 0 || ^ ( ) cDelta[j] < 0 && cDelta[i] < 0 ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1250:36: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1219: '&&' within '||' [-Wlogical-op-parentheses] :36: note: place parentheses around the '&&' expression to silence this warning cDelta[j] < 0 && cDelta[i] < 0 ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ cDelta[j] < 0 && cDelta[i] < 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1250:36: note: place parentheses around the '&&' expression to silence this warning cDelta[j] < 0 && cDelta[i] < 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1249:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( cDelta[j] > 0 && cDelta[i] > 0 || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1249:36: note: place parentheses around the '&&' expression to silence this warning if ( cDelta[j] > 0 && cDelta[i] > 0 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1250:36: warning: '&&' within '||' [-Wlogical-op-parentheses] cDelta[j] < 0 && cDelta[i] < 0 ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1250:36: note: place parentheses around the '&&' expression to silence this warning cDelta[j] < 0 && cDelta[i] < 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1829:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] for ( b = el; e = strchr( b, ';'); b = e+1 ) { ~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1829:25: note: place parentheses around the assignment to silence this warning for ( b = el; e = strchr( b, ';'); b = e+1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1829:25: note: use '==' to turn this assignment into an equality comparison for ( b = el; e = strchr( b, ';'); b = e+1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2128:49: warning: '&&' within '||' [-Wlogical-op-parentheses] || 1 == at[n1].charge && 2 == at[n1].valence ~~ ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2128:49: note: place parentheses around the '&&' expression to silence this warning || 1 == at[n1].charge && 2 == at[n1].valence ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1829:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] for ( b = el; e = strchr( b, ';'); b = e+1 ) { ~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1829:25: note: place parentheses around the assignment to silence this warning for ( b = el; e = strchr( b, ';'); b = e+1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:1829:25: note: use '==' to turn this assignment into an equality comparison for ( b = el; e = strchr( b, ';'); b = e+1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2215:49: warning: '&&' within '||' [-Wlogical-op-parentheses] || 1 == at[n1].charge && 2 == at[n1].valence ~~ ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2215:49: note: place parentheses around the '&&' expression to silence this warning || 1 == at[n1].charge && 2 == at[n1].valence ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2128:49: warning: '&&' within '||' [-Wlogical-op-parentheses] || 1 == at[n1].charge && 2 == at[n1].valence ~~ ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2128:49: note: place parentheses around the '&&' expression to silence this warning || 1 == at[n1].charge && 2 == at[n1].valence ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2215:49: warning: '&&' within '||' [-Wlogical-op-parentheses] || 1 == at[n1].charge && 2 == at[n1].valence ~~ ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2215:49: note: place parentheses around the '&&' expression to silence this warning || 1 == at[n1].charge && 2 == at[n1].valence ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2439:76: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !at->valence && at->charge == 0 && 1 == at->num_H && !at->radical && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2439:76: note: place parentheses around the '&&' expression to silence this warning if ( !at->valence && at->charge == 0 && 1 == at->num_H && !at->radical && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2444:76: warning: '&&' within '||' [-Wlogical-op-parentheses] !at->valence && at->charge == 0 && 2 == at->num_H && !at->radical && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2444:76: note: place parentheses around the '&&' expression to silence this warning !at->valence && at->charge == 0 && 2 == at->num_H && !at->radical && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2588:92: warning: '&&' within '||' [-Wlogical-op-parentheses] atom[neigh].valence == 2 && (!atom[neigh].num_H || atom[neigh].num_H == 1 && atom[neigh].charge == 1) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2588:92: note: place parentheses around the '&&' expression to silence this warning atom[neigh].valence == 2 && (!atom[neigh].num_H || atom[neigh].num_H == 1 && atom[neigh].charge == 1) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2439:76: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !at->valence && at->charge == 0 && 1 == at->num_H && !at->radical && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2439:76: note: place parentheses around the '&&' expression to silence this warning if ( !at->valence && at->charge == 0 && 1 == at->num_H && !at->radical && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2444:76: warning: '&&' within '||' [-Wlogical-op-parentheses] !at->valence && at->charge == 0 && 2 == at->num_H && !at->radical && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2444:76: note: place parentheses around the '&&' expression to silence this warning !at->valence && at->charge == 0 && 2 == at->num_H && !at->radical && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2588:92: warning: '&&' within '||' [-Wlogical-op-parentheses] atom[neigh].valence == 2 && (!atom[neigh].num_H || atom[neigh].num_H == 1 && atom[neigh].charge == 1) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:2588:92: note: place parentheses around the '&&' expression to silence this warning atom[neigh].valence == 2 && (!atom[neigh].num_H || atom[neigh].num_H == 1 && atom[neigh].charge == 1) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:3020:25: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nCharge==1 && at[c_point].charge != 1 || nCharge==-1 && at[c_point].charge == -1 ) ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:3020:25: note: place parentheses around the '&&' expression to silence this warning if ( nCharge==1 && at[c_point].charge != 1 || nCharge==-1 && at[c_point].charge == -1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:3020:67: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nCharge==1 && at[c_point].charge != 1 || nCharge==-1 && at[c_point].charge == -1 ) ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:3020:67: note: place parentheses around the '&&' expression to silence this warning if ( nCharge==1 && at[c_point].charge != 1 || nCharge==-1 && at[c_point].charge == -1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:3020:25: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nCharge==1 && at[c_point].charge != 1 || nCharge==-1 && at[c_point].charge == -1 ) ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:3020:25: note: place parentheses around the '&&' expression to silence this warning if ( nCharge==1 && at[c_point].charge != 1 || nCharge==-1 && at[c_point].charge == -1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:3020:67: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nCharge==1 && at[c_point].charge != 1 || nCharge==-1 && at[c_point].charge == -1 ) ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:3020:67: note: place parentheses around the '&&' expression to silence this warning if ( nCharge==1 && at[c_point].charge != 1 || nCharge==-1 && at[c_point].charge == -1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:4112:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num = pAATG->nAtTypeTotals[ATTOT_NUM_NP_Proton] + pAATG->nAtTypeTotals[ATTOT_NUM_OH_Plus] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:4112:14: note: place parentheses around the assignment to silence this warning if ( num = pAATG->nAtTypeTotals[ATTOT_NUM_NP_Proton] + pAATG->nAtTypeTotals[ATTOT_NUM_OH_Plus] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:4112:14: note: use '==' to turn this assignment into an equality comparison if ( num = pAATG->nAtTypeTotals[ATTOT_NUM_NP_Proton] + pAATG->nAtTypeTotals[ATTOT_NUM_OH_Plus] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:4112:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num = pAATG->nAtTypeTotals[ATTOT_NUM_NP_Proton] + pAATG->nAtTypeTotals[ATTOT_NUM_OH_Plus] ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:4112:14: note: place parentheses around the assignment to silence this warning if ( num = pAATG->nAtTypeTotals[ATTOT_NUM_NP_Proton] + pAATG->nAtTypeTotals[ATTOT_NUM_OH_Plus] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:4112:14: note: use '==' to turn this assignment into an equality comparison if ( num = pAATG->nAtTypeTotals[ATTOT_NUM_NP_Proton] + pAATG->nAtTypeTotals[ATTOT_NUM_OH_Plus] ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6026:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( n = apc->bSetOldCapsVert[i] ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6026:20: note: place parentheses around the assignment to silence this warning if ( n = apc->bSetOldCapsVert[i] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6026:20: note: use '==' to turn this assignment into an equality comparison if ( n = apc->bSetOldCapsVert[i] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6042:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( n = apc->bSetOldCapsVert[i] ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6042:20: note: place parentheses around the assignment to silence this warning if ( n = apc->bSetOldCapsVert[i] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6042:20: note: use '==' to turn this assignment into an equality comparison if ( n = apc->bSetOldCapsVert[i] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6018:46: warning: 'memset' call operates on objects of type 'BNS_VERTEX' (aka 'struct BnsVertex') while the size is based on a different type 'BNS_VERTEX *' (aka 'struct BnsVertex *') [-Wsizeof-pointer-memaccess] memset( pNewVert, 0, sizeof( pNewVert ) ); ~~~~~~~~ ^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6018:46: note: did you mean to dereference the argument to 'sizeof' (and multiply it by the number of elements)? memset( pNewVert, 0, sizeof( pNewVert ) ); ^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6071:46: warning: 'memset' call operates on objects of type 'BNS_VERTEX' (aka 'struct BnsVertex') while the size is based on a different type 'BNS_VERTEX *' (aka 'struct BnsVertex *') [-Wsizeof-pointer-memaccess] memset( pNewVert, 0, sizeof( pNewVert ) ); ~~~~~~~~ ^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6071:46: note: did you mean to dereference the argument to 'sizeof' (and multiply it by the number of elements)? memset( pNewVert, 0, sizeof( pNewVert ) ); ^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6026:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( n = apc->bSetOldCapsVert[i] ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6026:20: note: place parentheses around the assignment to silence this warning if ( n = apc->bSetOldCapsVert[i] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6026:20: note: use '==' to turn this assignment into an equality comparison if ( n = apc->bSetOldCapsVert[i] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6042:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( n = apc->bSetOldCapsVert[i] ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6042:20: note: place parentheses around the assignment to silence this warning if ( n = apc->bSetOldCapsVert[i] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6042:20: note: use '==' to turn this assignment into an equality comparison if ( n = apc->bSetOldCapsVert[i] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6018:46: warning: 'memset' call operates on objects of type 'BNS_VERTEX' (aka 'struct BnsVertex') while the size is based on a different type 'BNS_VERTEX *' (aka 'struct BnsVertex *') [-Wsizeof-pointer-memaccess] memset( pNewVert, 0, sizeof( pNewVert ) ); ~~~~~~~~ ^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6018:46: note: did you mean to dereference the argument to 'sizeof' (and multiply it by the number of elements)? memset( pNewVert, 0, sizeof( pNewVert ) ); ^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6071:46: warning: 'memset' call operates on objects of type 'BNS_VERTEX' (aka 'struct BnsVertex') while the size is based on a different type 'BNS_VERTEX *' (aka 'struct BnsVertex *') [-Wsizeof-pointer-memaccess] memset( pNewVert, 0, sizeof( pNewVert ) ); ~~~~~~~~ ^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6071:46: note: did you mean to dereference the argument to 'sizeof' (and multiply it by the number of elements)? memset( pNewVert, 0, sizeof( pNewVert ) ); ^~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6983:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ((ret & 1) || (ret_val & 1)) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6983:51: note: place parentheses around the '&&' expression to silence this warning if ( ((ret & 1) || (ret_val & 1)) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6983:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ((ret & 1) || (ret_val & 1)) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:6983:51: note: place parentheses around the '&&' expression to silence this warning if ( ((ret & 1) || (ret_val & 1)) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:8407:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pBNS->edge[iuv].neighbor1 != (u/2-1) && pBNS->edge[iuv].neighbor1 != v/2-1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:8407:49: note: place parentheses around the '&&' expression to silence this warning if ( pBNS->edge[iuv].neighbor1 != (u/2-1) && pBNS->edge[iuv].neighbor1 != v/2-1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:8407:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pBNS->edge[iuv].neighbor1 != (u/2-1) && pBNS->edge[iuv].neighbor1 != v/2-1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:8407:49: note: place parentheses around the '&&' expression to silence this warning if ( pBNS->edge[iuv].neighbor1 != (u/2-1) && pBNS->edge[iuv].neighbor1 != v/2-1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9291:82: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !nStackAtom || !nRingStack || !nDfsNumber || !nLowNumber || !nBondStack && num_edges || !cNeighNumb ~~ ~~~~~~~~~~~~^~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9291:82: note: place parentheses around the '&&' expression to silence this warning if ( !nStackAtom || !nRingStack || !nDfsNumber || !nLowNumber || !nBondStack && num_edges || !cNeighNumb ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9409:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i == bond[w].neighbor1 && u == (i ^ bond[w].neighbor12) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9409:53: note: place parentheses around the '&&' expression to silence this warning if ( i == bond[w].neighbor1 && u == (i ^ bond[w].neighbor12) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9410:53: warning: '&&' within '||' [-Wlogical-op-parentheses] u == bond[w].neighbor1 && i == (u ^ bond[w].neighbor12)) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9410:53: note: place parentheses around the '&&' expression to silence this warning u == bond[w].neighbor1 && i == (u ^ bond[w].neighbor12)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9291:82: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !nStackAtom || !nRingStack || !nDfsNumber || !nLowNumber || !nBondStack && num_edges || !cNeighNumb ~~ ~~~~~~~~~~~~^~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9291:82: note: place parentheses around the '&&' expression to silence this warning if ( !nStackAtom || !nRingStack || !nDfsNumber || !nLowNumber || !nBondStack && num_edges || !cNeighNumb ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9409:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i == bond[w].neighbor1 && u == (i ^ bond[w].neighbor12) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9409:53: note: place parentheses around the '&&' expression to silence this warning if ( i == bond[w].neighbor1 && u == (i ^ bond[w].neighbor12) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9410:53: warning: '&&' within '||' [-Wlogical-op-parentheses] u == bond[w].neighbor1 && i == (u ^ bond[w].neighbor12)) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9410:53: note: place parentheses around the '&&' expression to silence this warning u == bond[w].neighbor1 && i == (u ^ bond[w].neighbor12)) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9824:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( bSuccess = (type & AaTypMask[2*j]) && (mask && AaTypMask[2*j+1]) ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9824:35: note: place parentheses around the assignment to silence this warning if ( bSuccess = (type & AaTypMask[2*j]) && (mask && AaTypMask[2*j+1]) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9824:35: note: use '==' to turn this assignment into an equality comparison if ( bSuccess = (type & AaTypMask[2*j]) && (mask && AaTypMask[2*j+1]) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9919:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( bSuccess = (type & ArTypMask[2*j]) && (mask && ArTypMask[2*j+1]) ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9919:35: note: place parentheses around the assignment to silence this warning if ( bSuccess = (type & ArTypMask[2*j]) && (mask && ArTypMask[2*j+1]) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9919:35: note: use '==' to turn this assignment into an equality comparison if ( bSuccess = (type & ArTypMask[2*j]) && (mask && ArTypMask[2*j+1]) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9824:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( bSuccess = (type & AaTypMask[2*j]) && (mask && AaTypMask[2*j+1]) ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9824:35: note: place parentheses around the assignment to silence this warning if ( bSuccess = (type & AaTypMask[2*j]) && (mask && AaTypMask[2*j+1]) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9824:35: note: use '==' to turn this assignment into an equality comparison if ( bSuccess = (type & AaTypMask[2*j]) && (mask && AaTypMask[2*j+1]) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9919:35: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( bSuccess = (type & ArTypMask[2*j]) && (mask && ArTypMask[2*j+1]) ) { ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9919:35: note: place parentheses around the assignment to silence this warning if ( bSuccess = (type & ArTypMask[2*j]) && (mask && ArTypMask[2*j+1]) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_bns.c:9919:35: note: use '==' to turn this assignment into an equality comparison if ( bSuccess = (type & ArTypMask[2*j]) && (mask && ArTypMask[2*j+1]) ) { ^ == [ 10%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/utils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/inchi.cpp:58: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/RDDepictor.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 10%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs_static.dir/Utils.cpp.o [ 10%] Built target RDBoost [ 10%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/RDLog.cpp.o [ 11%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral_static.dir/RDLog.cpp.o [ 11%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/inchi_dll.c.o [ 11%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs_static.dir/base64.cpp.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:312:9: warning: '&&' within '||' [-Wlogical-op-parentheses] && (!inp || inp->num_atoms <= 0 || !inp->atom) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:312:9: note: place parentheses around the '&&' expression to silence this warning && (!inp || inp->num_atoms <= 0 || !inp->atom) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:314:58: warning: '&&' within '||' [-Wlogical-op-parentheses] || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:314:58: note: place parentheses around the '&&' expression to silence this warning || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:736:48: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( p && (p==pStrErr || *(p-1) == ' ' && (*(p-2) == ';' || *(p-2) == ':' )) && ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:736:48: note: place parentheses around the '&&' expression to silence this warning if ( p && (p==pStrErr || *(p-1) == ' ' && (*(p-2) == ';' || *(p-2) == ':' )) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:738:36: warning: '&&' within '||' [-Wlogical-op-parentheses] p[lenMsg] == ';' && p[lenMsg+1] == ' ' || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:738:36: note: place parentheses around the '&&' expression to silence this warning p[lenMsg] == ';' && p[lenMsg+1] == ' ' || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:739:36: warning: '&&' within '||' [-Wlogical-op-parentheses] p[lenMsg-1]==':' && p[lenMsg]==' ') ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:739:36: note: place parentheses around the '&&' expression to silence this warning p[lenMsg-1]==':' && p[lenMsg]==' ') ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1233:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( n1+1 < at[a1].valence && is_in_the_list( at[a1].neighbor+n1+1, (AT_NUMB)a2, at[a1].valence-n1-1 ) || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1233:36: note: place parentheses around the '&&' expression to silence this warning if ( n1+1 < at[a1].valence && is_in_the_list( at[a1].neighbor+n1+1, (AT_NUMB)a2, at[a1].valence-n1-1 ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1234:36: warning: '&&' within '||' [-Wlogical-op-parentheses] n2+1 < at[a2].valence && is_in_the_list( at[a2].neighbor+n2+1, (AT_NUMB)a1, at[a2].valence-n2-1 ) ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1234:36: note: place parentheses around the '&&' expression to silence this warning n2+1 < at[a2].valence && is_in_the_list( at[a2].neighbor+n2+1, (AT_NUMB)a1, at[a2].valence-n2-1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1253:17: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( p1 && (cBondType != at[a1].bond_type[n1] || at[a1].bond_stereo[n1] != cStereoType1 )|| ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1253:17: note: place parentheses around the '&&' expression to silence this warning if ( p1 && (cBondType != at[a1].bond_type[n1] || at[a1].bond_stereo[n1] != cStereoType1 )|| ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1254:17: warning: '&&' within '||' [-Wlogical-op-parentheses] p2 && (cBondType != at[a2].bond_type[n2] || at[a2].bond_stereo[n2] != cStereoType2 ) ) { ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1254:17: note: place parentheses around the '&&' expression to silence this warning p2 && (cBondType != at[a2].bond_type[n2] || at[a2].bond_stereo[n2] != cStereoType2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1337:45: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nRadical && at[a1].radical && nRadical != at[a1].radical || ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1337:45: note: place parentheses around the '&&' expression to silence this warning if ( nRadical && at[a1].radical && nRadical != at[a1].radical || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1338:45: warning: '&&' within '||' [-Wlogical-op-parentheses] nCharge && at[a1].charge && nCharge != at[a1].charge ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1338:45: note: place parentheses around the '&&' expression to silence this warning nCharge && at[a1].charge && nCharge != at[a1].charge ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1497:20: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_atoms && !outStruct->atom || num_stereo0D > 0 && !outStruct->stereo0D ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1497:20: note: place parentheses around the '&&' expression to silence this warning if ( num_atoms && !outStruct->atom || num_stereo0D > 0 && !outStruct->stereo0D ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1497:60: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_atoms && !outStruct->atom || num_stereo0D > 0 && !outStruct->stereo0D ) { ~~ ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1497:60: note: place parentheses around the '&&' expression to silence this warning if ( num_atoms && !outStruct->atom || num_stereo0D > 0 && !outStruct->stereo0D ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1896:9: warning: '&&' within '||' [-Wlogical-op-parentheses] && (!inpInChI || !inpInChI->szInChI) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1896:9: note: place parentheses around the '&&' expression to silence this warning && (!inpInChI || !inpInChI->szInChI) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1898:58: warning: '&&' within '||' [-Wlogical-op-parentheses] || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1898:58: note: place parentheses around the '&&' expression to silence this warning || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:2207:9: warning: '&&' within '||' [-Wlogical-op-parentheses] && (!inpInChI || !inpInChI->szInChI) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:2207:9: note: place parentheses around the '&&' expression to silence this warning && (!inpInChI || !inpInChI->szInChI) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:2209:58: warning: '&&' within '||' [-Wlogical-op-parentheses] || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:2209:58: note: place parentheses around the '&&' expression to silence this warning || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 17 warnings generated. [ 11%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/inchi_dll.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:312:9: warning: '&&' within '||' [-Wlogical-op-parentheses] && (!inp || inp->num_atoms <= 0 || !inp->atom) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:312:9: note: place parentheses around the '&&' expression to silence this warning && (!inp || inp->num_atoms <= 0 || !inp->atom) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:314:58: warning: '&&' within '||' [-Wlogical-op-parentheses] || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:314:58: note: place parentheses around the '&&' expression to silence this warning || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:736:48: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( p && (p==pStrErr || *(p-1) == ' ' && (*(p-2) == ';' || *(p-2) == ':' )) && ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:736:48: note: place parentheses around the '&&' expression to silence this warning if ( p && (p==pStrErr || *(p-1) == ' ' && (*(p-2) == ';' || *(p-2) == ':' )) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:738:36: warning: '&&' within '||' [-Wlogical-op-parentheses] p[lenMsg] == ';' && p[lenMsg+1] == ' ' || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:738:36: note: place parentheses around the '&&' expression to silence this warning p[lenMsg] == ';' && p[lenMsg+1] == ' ' || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:739:36: warning: '&&' within '||' [-Wlogical-op-parentheses] p[lenMsg-1]==':' && p[lenMsg]==' ') ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:739:36: note: place parentheses around the '&&' expression to silence this warning p[lenMsg-1]==':' && p[lenMsg]==' ') ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1233:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( n1+1 < at[a1].valence && is_in_the_list( at[a1].neighbor+n1+1, (AT_NUMB)a2, at[a1].valence-n1-1 ) || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1233:36: note: place parentheses around the '&&' expression to silence this warning if ( n1+1 < at[a1].valence && is_in_the_list( at[a1].neighbor+n1+1, (AT_NUMB)a2, at[a1].valence-n1-1 ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1234:36: warning: '&&' within '||' [-Wlogical-op-parentheses] n2+1 < at[a2].valence && is_in_the_list( at[a2].neighbor+n2+1, (AT_NUMB)a1, at[a2].valence-n2-1 ) ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1234:36: note: place parentheses around the '&&' expression to silence this warning n2+1 < at[a2].valence && is_in_the_list( at[a2].neighbor+n2+1, (AT_NUMB)a1, at[a2].valence-n2-1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1253:17: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( p1 && (cBondType != at[a1].bond_type[n1] || at[a1].bond_stereo[n1] != cStereoType1 )|| ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1253:17: note: place parentheses around the '&&' expression to silence this warning if ( p1 && (cBondType != at[a1].bond_type[n1] || at[a1].bond_stereo[n1] != cStereoType1 )|| ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1254:17: warning: '&&' within '||' [-Wlogical-op-parentheses] p2 && (cBondType != at[a2].bond_type[n2] || at[a2].bond_stereo[n2] != cStereoType2 ) ) { ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1254:17: note: place parentheses around the '&&' expression to silence this warning p2 && (cBondType != at[a2].bond_type[n2] || at[a2].bond_stereo[n2] != cStereoType2 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1337:45: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nRadical && at[a1].radical && nRadical != at[a1].radical || ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1337:45: note: place parentheses around the '&&' expression to silence this warning if ( nRadical && at[a1].radical && nRadical != at[a1].radical || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1338:45: warning: '&&' within '||' [-Wlogical-op-parentheses] nCharge && at[a1].charge && nCharge != at[a1].charge ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1338:45: note: place parentheses around the '&&' expression to silence this warning nCharge && at[a1].charge && nCharge != at[a1].charge ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1497:20: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_atoms && !outStruct->atom || num_stereo0D > 0 && !outStruct->stereo0D ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1497:20: note: place parentheses around the '&&' expression to silence this warning if ( num_atoms && !outStruct->atom || num_stereo0D > 0 && !outStruct->stereo0D ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1497:60: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_atoms && !outStruct->atom || num_stereo0D > 0 && !outStruct->stereo0D ) { ~~ ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1497:60: note: place parentheses around the '&&' expression to silence this warning if ( num_atoms && !outStruct->atom || num_stereo0D > 0 && !outStruct->stereo0D ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1896:9: warning: '&&' within '||' [-Wlogical-op-parentheses] && (!inpInChI || !inpInChI->szInChI) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1896:9: note: place parentheses around the '&&' expression to silence this warning && (!inpInChI || !inpInChI->szInChI) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1898:58: warning: '&&' within '||' [-Wlogical-op-parentheses] || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:1898:58: note: place parentheses around the '&&' expression to silence this warning || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:2207:9: warning: '&&' within '||' [-Wlogical-op-parentheses] && (!inpInChI || !inpInChI->szInChI) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:2207:9: note: place parentheses around the '&&' expression to silence this warning && (!inpInChI || !inpInChI->szInChI) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:2209:58: warning: '&&' within '||' [-Wlogical-op-parentheses] || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll.c:2209:58: note: place parentheses around the '&&' expression to silence this warning || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ^ [ 11%] 30 warnings generated. 30 warnings generated. Building CXX object Code/DataStructs/CMakeFiles/DataStructs_static.dir/BitOps.cpp.o [ 11%] [ 12%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichiread.c.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichiread.c.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 17 warnings generated. [ 12%] Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral.dir/Dict.cpp.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1480:47: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bReqNonTaut || j != TAUT_NON && OneInput->pInpInChI[iINChI][j] ) ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1480:47: note: place parentheses around the '&&' expression to silence this warning if ( bReqNonTaut || j != TAUT_NON && OneInput->pInpInChI[iINChI][j] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1480:47: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bReqNonTaut || j != TAUT_NON && OneInput->pInpInChI[iINChI][j] ) ~~ ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1480:47: note: place parentheses around the '&&' expression to silence this warning if ( bReqNonTaut || j != TAUT_NON && OneInput->pInpInChI[iINChI][j] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1516:38: warning: '&&' within '||' [-Wlogical-op-parentheses] else if ( !k && nModeProtonIsoExchgH[iINChI] == MODE_PIXH_ADD_TO_FIRST || ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1516:38: note: place parentheses around the '&&' expression to silence this warning else if ( !k && nModeProtonIsoExchgH[iINChI] == MODE_PIXH_ADD_TO_FIRST || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1517:73: warning: '&&' within '||' [-Wlogical-op-parentheses] k+1 == OneInput->nNumComponents[iINChI][j] && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1517:73: note: place parentheses around the '&&' expression to silence this warning k+1 == OneInput->nNumComponents[iINChI][j] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1516:38: warning: '&&' within '||' [-Wlogical-op-parentheses] else if ( !k && nModeProtonIsoExchgH[iINChI] == MODE_PIXH_ADD_TO_FIRST || ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1516:38: note: place parentheses around the '&&' expression to silence this warning else if ( !k && nModeProtonIsoExchgH[iINChI] == MODE_PIXH_ADD_TO_FIRST || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1517:73: warning: '&&' within '||' [-Wlogical-op-parentheses] k+1 == OneInput->nNumComponents[iINChI][j] && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1517:73: note: place parentheses around the '&&' expression to silence this warning k+1 == OneInput->nNumComponents[iINChI][j] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1617:62: warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[iINChI][k][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1617:62: note: place parentheses around the '&&' expression to silence this warning int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[iINChI][k][TAUT_NON]->lenTautomer || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1618:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c62:1617:62: warning: '&&' within '||' [-Wlogical-op-parentheses] : warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[iINChI][k][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ cur_is_in_taut && 0 == pINChI[iINChI][k][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1617:62: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1618:62: note: place parentheses around the '&&' expression to silence this warning int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[iINChI][k][TAUT_NON]->lenTautomer || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1618:62: cur_is_in_taut && 0 == pINChI[iINChI][k][TAUT_YES]->lenTautomer; warning: '&&' within '||' [-Wlogical-op-parentheses] ^ ( ) cur_is_in_taut && 0 == pINChI[iINChI][k][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1618:62: note: place parentheses around the '&&' expression to silence this warning cur_is_in_taut && 0 == pINChI[iINChI][k][TAUT_YES]->lenTautomer; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1653:66: warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[iINChI][k][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1653:66: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1653:66: warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[iINChI][k][TAUT_NON]->lenTautomer || ^ ( ) int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[iINChI][k][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1653:66: note: :1654:66:place parentheses around the '&&' expression to silence this warning warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[iINChI][k][TAUT_NON]->lenTautomer || ^ ( ) cur_is_in_taut && 0 == pINChI[iINChI][k][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1654:66: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1654:66:: '&&' within '||' [-Wlogical-op-parentheses] note: place parentheses around the '&&' expression to silence this warning cur_is_in_taut && 0 == pINChI[iINChI][k][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ cur_is_in_taut && 0 == pINChI[iINChI][k][TAUT_YES]->lenTautomer; ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c: ( )1654 :66: note: place parentheses around the '&&' expression to silence this warning cur_is_in_taut && 0 == pINChI[iINChI][k][TAUT_YES]->lenTautomer; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1873:32: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1873:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ~~ if ( INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1873:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:321873: note: place parentheses around the '&&' expression to silence this warning :32: note: place parentheses around the '&&' expression to silence this warning if ( INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ if ( INCHI_BAS != iInChI && iInChI != INCHI_REC || /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~: 1874:32: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1874:32: warning: '&&' within '||' [-Wlogical-op-parentheses] TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1874:32: TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c: :place parentheses around the '&&' expression to silence this warning1874:32 : note: place parentheses around the '&&' expression to silence this warning TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1885:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1885:32: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1885:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1886:32: warning if ( INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ ~~ : '&&' within '||' [-Wlogical-op-parentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c :1885:32: note: place parentheses around the '&&' expression to silence this warning TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ if ( INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1886:32: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.cplace parentheses around the '&&' expression to silence this warning:1886: 32: warning: '&&' within '||' [-Wlogical-op-parentheses] TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1886:32: note: place parentheses around the '&&' expression to silence this warning TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1898:32: warning: '&&' within '||' [-Wlogical-op-parentheses] INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1898:32:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1898:32: warning: '&&' within '||' [-Wlogical-op-parentheses] note: place parentheses around the '&&' expression to silence this warning INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1898:32 : note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1899:32: INCHI_BAS != iInChI && iInChI != INCHI_REC ||warning : ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~'&&' within '||' [-Wlogical-op-parentheses] TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1899:32: warning: '&&' within '||' [-Wlogical-op-parentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c :1899:32: note: place parentheses around the '&&' expression to silence this warning TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) {: 1899 ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~: 32: note: place parentheses around the '&&' expression to silence this warning TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1913:32: warning: '&&' within '||' [-Wlogical-op-parentheses] INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1913:32: note: place parentheses around the '&&' expression to silence this warning INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1914:32: warning: '&&' within '||' [-Wlogical-op-parentheses] TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1913:32:1914:32: note: place parentheses around the '&&' expression to silence this warning: warning: '&&' within '||' [-Wlogical-op-parentheses] INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) {: 1913 ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~: 32: note: place parentheses around the '&&' expression to silence this warning INCHI_BAS != iInChI && iInChI != INCHI_REC || ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1914:32: warning: '&&' within '||' [-Wlogical-op-parentheses] TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:1914:32: note: place parentheses around the '&&' expression to silence this warning TAUT_NON != bMobileH && TAUT_YES != bMobileH || k < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2041:67: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pInChI->nNumberOfAtoms > 1 || pInChI->nNum_H && pInChI->nNum_H[0] ) ~~ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2041:67: note: place parentheses around the '&&' expression to silence this warning if ( pInChI->nNumberOfAtoms > 1 || pInChI->nNum_H && pInChI->nNum_H[0] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2041:67: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pInChI->nNumberOfAtoms > 1 || pInChI->nNum_H && pInChI->nNum_H[0] ) ~~ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2041:67: note: place parentheses around the '&&' expression to silence this warning if ( pInChI->nNumberOfAtoms > 1 || pInChI->nNum_H && pInChI->nNum_H[0] ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2140:77: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nModeProtonIsoExchgH[iINChI] == MODE_PIXH_ADD_A_PIXH_COMPONENT && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2140:77: note: place parentheses around the '&&' expression to silence this warning if ( nModeProtonIsoExchgH[iINChI] == MODE_PIXH_ADD_A_PIXH_COMPONENT && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2144:58: warning: '&&' within '||' [-Wlogical-op-parentheses] !OneInput->nNumComponents[iINChI][TAUT_NON] && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2144:58: note: place parentheses around the '&&' expression to silence this warning !OneInput->nNumComponents[iINChI][TAUT_NON] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2140:77: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nModeProtonIsoExchgH[iINChI] == MODE_PIXH_ADD_A_PIXH_COMPONENT && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2140:77: note: place parentheses around the '&&' expression to silence this warning if ( nModeProtonIsoExchgH[iINChI] == MODE_PIXH_ADD_A_PIXH_COMPONENT && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2144:58: warning: '&&' within '||' [-Wlogical-op-parentheses] !OneInput->nNumComponents[iINChI][TAUT_NON] && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2144:58: note: place parentheses around the '&&' expression to silence this warning !OneInput->nNumComponents[iINChI][TAUT_NON] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2512:46: warning: '&&' within '||' [-Wlogical-op-parentheses] pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2512:46: note: place parentheses around the '&&' expression to silence this warning pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2519:138: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2519:138: note: place parentheses around the '&&' expression to silence this warning (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2591:59: warning: '&&' within '||' [-Wlogical-op-parentheses] pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2591:59: note: place parentheses around the '&&' expression to silence this warning pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2627:47: warning: '&&' within '||' [-Wlogical-op-parentheses] pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2627:47: note: place parentheses around the '&&' expression to silence this warning pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2704:46: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c: pAltInChI && ( 2512 ~~~~~~~~~~^~~~: 46: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2704:46: note: place parentheses around the '&&' expression to silence this warning pAltInChI && ( pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2512:46: note: place parentheses around the '&&' expression to silence this warning pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2519:138: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2731:118: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ (!pInChI->Stereo->nCompInv2Abs || NO_VALUE_INT == pInChI->Stereo->nCompInv2Abs) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2519:138: note: place parentheses around the '&&' expression to silence this warning :2731:118: note: place parentheses around the '&&' expression to silence this warning (!pInChI->Stereo->nCompInv2Abs || NO_VALUE_INT == pInChI->Stereo->nCompInv2Abs) && ^ (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2786:77: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pInChI->StereoIsotopic && 0 > (ret2 = CopySegment( pInChI, pAltInChI, CPY_SP3_M, 1, -1)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2786:77: note: place parentheses around the '&&' expression to silence this warning if ( !pInChI->StereoIsotopic && 0 > (ret2 = CopySegment( pInChI, pAltInChI, CPY_SP3_M, 1, -1)) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2788:79: warning: '&&' within '||' [-Wlogical-op-parentheses] || !pAltInChI->StereoIsotopic && 0 > (ret2 = CopySegment( pAltInChI, pAltInChI, CPY_SP3_M, 1, -1)) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2788:79: note: place parentheses around the '&&' expression to silence this warning || !pAltInChI->StereoIsotopic && 0 > (ret2 = CopySegment( pAltInChI, pAltInChI, CPY_SP3_M, 1, -1)) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2591:59: warning: '&&' within '||' [-Wlogical-op-parentheses] pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2591:59: note: place parentheses around the '&&' expression to silence this warning pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2870:138: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2870:138: note: place parentheses around the '&&' expression to silence this warning (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2627:47: warning: '&&' within '||' [-Wlogical-op-parentheses] pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2627:47: note: place parentheses around the '&&' expression to silence this warning pInChI_Alt && pInChI_Alt->nNumberOfIsotopicAtoms; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2924:138: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2924:138: note: place parentheses around the '&&' expression to silence this warning (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2704:46: warning: '&&' within '||' [-Wlogical-op-parentheses] pAltInChI && ( ~~~~~~~~~~^~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3006:45: warning: '&&' within '||' [-Wlogical-op-parentheses] :2704:46: note: place parentheses around the '&&' expression to silence this warning if ( pInChI->Stereo && pInChI->Stereo->nCompInv2Abs == NO_VALUE_INT || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3006: pAltInChI && ( ^ 45: note: place parentheses around the '&&' expression to silence this warning if ( pInChI->Stereo && pInChI->Stereo->nCompInv2Abs == NO_VALUE_INT || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3007:53: warning: '&&' within '||' [-Wlogical-op-parentheses] pInChI->StereoIsotopic && pInChI->StereoIsotopic->nCompInv2Abs == NO_VALUE_INT ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3007:53: note: place parentheses around the '&&' expression to silence this warning pInChI->StereoIsotopic && pInChI->StereoIsotopic->nCompInv2Abs == NO_VALUE_INT ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2731:118: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pInChI->Stereo->nCompInv2Abs || NO_VALUE_INT == pInChI->Stereo->nCompInv2Abs) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2731:118: note: place parentheses around the '&&' expression to silence this warning (!pInChI->Stereo->nCompInv2Abs || NO_VALUE_INT == pInChI->Stereo->nCompInv2Abs) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2786:77: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pInChI->StereoIsotopic && 0 > (ret2 = CopySegment( pInChI, pAltInChI, CPY_SP3_M, 1, -1)) ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2786:77: note: place parentheses around the '&&' expression to silence this warning if ( !pInChI->StereoIsotopic && 0 > (ret2 = CopySegment( pInChI, pAltInChI, CPY_SP3_M, 1, -1)) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2788:79: warning: '&&' within '||' [-Wlogical-op-parentheses] || !pAltInChI->StereoIsotopic && 0 > (ret2 = CopySegment( pAltInChI, pAltInChI, CPY_SP3_M, 1, -1)) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2788:79: note: place parentheses around the '&&' expression to silence this warning || !pAltInChI->StereoIsotopic && 0 > (ret2 = CopySegment( pAltInChI, pAltInChI, CPY_SP3_M, 1, -1)) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2870:138: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2870:138: note: place parentheses around the '&&' expression to silence this warning (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2924:138: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:2924:138: note: place parentheses around the '&&' expression to silence this warning (!pInChI->StereoIsotopic->nCompInv2Abs || NO_VALUE_INT == pInChI->StereoIsotopic->nCompInv2Abs) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3006:45: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pInChI->Stereo && pInChI->Stereo->nCompInv2Abs == NO_VALUE_INT || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3006:45: note: place parentheses around the '&&' expression to silence this warning if ( pInChI->Stereo && pInChI->Stereo->nCompInv2Abs == NO_VALUE_INT || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3007:53: warning: '&&' within '||' [-Wlogical-op-parentheses] pInChI->StereoIsotopic && pInChI->StereoIsotopic->nCompInv2Abs == NO_VALUE_INT ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3007:53: note: place parentheses around the '&&' expression to silence this warning pInChI->StereoIsotopic && pInChI->StereoIsotopic->nCompInv2Abs == NO_VALUE_INT ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3532:38: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(UCINT *pStart) && ~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3532:38: note: place parentheses around the '&&' expression to silence this warning if ( (isdigit(UCINT *pStart) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4055:61: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pLine->len == 0 || c != SEG_END && c != RI_ERR_EOF && !INCHI_INP_EOL(c) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4055:61: note: place parentheses around the '&&' expression to silence this warning if ( pLine->len == 0 || c != SEG_END && c != RI_ERR_EOF && !INCHI_INP_EOL(c) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4338:42: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pLine->len == 0 || c != SEG_END && c != RI_ERR_EOF || !(p = strstr(pLine->str, "InChI=1")) ) ~~ ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4338:42: note: place parentheses around the '&&' expression to silence this warning if ( pLine->len == 0 || c != SEG_END && c != RI_ERR_EOF || !(p = strstr(pLine->str, "InChI=1")) ) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3532:38: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(UCINT *pStart) && ~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:3532:38: note: place parentheses around the '&&' expression to silence this warning if ( (isdigit(UCINT *pStart) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4055:61: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pLine->len == 0 || c != SEG_END && c != RI_ERR_EOF && !INCHI_INP_EOL(c) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4055:61: note: place parentheses around the '&&' expression to silence this warning if ( pLine->len == 0 || c != SEG_END && c != RI_ERR_EOF && !INCHI_INP_EOL(c) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4917:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !(bMobileH==TAUT_YES && state == IST_MOBILE_H_ISO_ATOMS || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4917:31: note: place parentheses around the '&&' expression to silence this warning if ( !(bMobileH==TAUT_YES && state == IST_MOBILE_H_ISO_ATOMS || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4918:31: warning: '&&' within '||' [-Wlogical-op-parentheses] bMobileH==TAUT_NON && state == IST_FIXED_H_ISO_ATOMS ) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4918:31: note: place parentheses around the '&&' expression to silence this warning bMobileH==TAUT_NON && state == IST_FIXED_H_ISO_ATOMS ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4944:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(*pStart) && ~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4944:32: note: place parentheses around the '&&' expression to silence this warning if ( (isdigit(*pStart) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4338:42: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pLine->len == 0 || c != SEG_END && c != RI_ERR_EOF || !(p = strstr(pLine->str, "InChI=1")) ) ~~ ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4338:42: note: place parentheses around the '&&' expression to silence this warning if ( pLine->len == 0 || c != SEG_END && c != RI_ERR_EOF || !(p = strstr(pLine->str, "InChI=1")) ) ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5060:96: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( p > pEnd || !isoAtom.nIsoDifference && !isoAtom.nNum_T && !isoAtom.nNum_D && !isoAtom.nNum_H ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5060:96: note: place parentheses around the '&&' expression to silence this warning if ( p > pEnd || !isoAtom.nIsoDifference && !isoAtom.nNum_T && !isoAtom.nNum_D && !isoAtom.nNum_H ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5236:40: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pStereo[0]->t_parity && ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5236:40: note: place parentheses around the '&&' expression to silence this warning if ( !pStereo[0]->t_parity && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5238:39: warning: '&&' within '||' [-Wlogical-op-parentheses] !pStereo[0]->nNumber && ~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5238:39: note: place parentheses around the '&&' expression to silence this warning !pStereo[0]->nNumber && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5340:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !bMobileHFrom && bIsoFrom || bMobileHFrom && !bIsoFrom ) { ~~~~~~~~~~~~~~^~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5340:32: note: place parentheses around the '&&' expression to silence this warning if ( !bMobileHFrom && bIsoFrom || bMobileHFrom && !bIsoFrom ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5340:60: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !bMobileHFrom && bIsoFrom || bMobileHFrom && !bIsoFrom ) { ~~ ~~~~~~~~~~~~~^~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5340:60: note: place parentheses around the '&&' expression to silence this warning if ( !bMobileHFrom && bIsoFrom || bMobileHFrom && !bIsoFrom ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5399:40: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pStereo[0]->t_parity && ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5399:40: note: place parentheses around the '&&' expression to silence this warning if ( !pStereo[0]->t_parity && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5401:39: warning: '&&' within '||' [-Wlogical-op-parentheses] !pStereo[0]->nNumber && ~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5401:39: note: place parentheses around the '&&' expression to silence this warning !pStereo[0]->nNumber && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4917:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !(bMobileH==TAUT_YES && state == IST_MOBILE_H_ISO_ATOMS || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4917:31: note: place parentheses around the '&&' expression to silence this warning if ( !(bMobileH==TAUT_YES && state == IST_MOBILE_H_ISO_ATOMS || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4918:31: warning: '&&' within '||' [-Wlogical-op-parentheses] bMobileH==TAUT_NON && state == IST_FIXED_H_ISO_ATOMS ) ) { ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4918:31: note: place parentheses around the '&&' expression to silence this warning bMobileH==TAUT_NON && state == IST_FIXED_H_ISO_ATOMS ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4944:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(*pStart) && ~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:4944:32: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5505:40: warning if ( (isdigit(*pStart) && ^ : '&&' within '||' [-Wlogical-op-parentheses] if ( !pStereo[0]->b_parity && ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5505:40: note: place parentheses around the '&&' expression to silence this warning if ( !pStereo[0]->b_parity && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5507:42: warning: '&&' within '||' [-Wlogical-op-parentheses] !pStereo[0]->nBondAtom1 && ~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5507:42: note: place parentheses around the '&&' expression to silence this warning !pStereo[0]->nBondAtom1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5509:42: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c !pStereo[0]->nBondAtom2 &&:5060:96: warning: '&&' within '||' [-Wlogical-op-parentheses] ~~~~~~~~~~~~~~~~~~~~~~~~^~ if ( p > pEnd || !isoAtom.nIsoDifference && !isoAtom.nNum_T && !isoAtom.nNum_D && !isoAtom.nNum_H ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5509:42: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5060:96: note: place parentheses around the '&&' expression to silence this warningnote: place parentheses around the '&&' expression to silence this warning !pStereo[0]->nBondAtom2 && if ( p > pEnd || !isoAtom.nIsoDifference && !isoAtom.nNum_T && !isoAtom.nNum_D && !isoAtom.nNum_H ) { ^ ( ) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5541:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(*pStart) && ~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5541:32: note: place parentheses around the '&&' expression to silence this warning if ( (isdigit(*pStart) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5236:40: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pStereo[0]->t_parity && ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5236:40: note: place parentheses around the '&&' expression to silence this warning if ( !pStereo[0]->t_parity && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5238:39: warning: '&&' within '||' [-Wlogical-op-parentheses] !pStereo[0]->nNumber && ~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5238:39: note: place parentheses around the '&&' expression to silence this warning !pStereo[0]->nNumber && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5340:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !bMobileHFrom && bIsoFrom || bMobileHFrom && !bIsoFrom ) { ~~~~~~~~~~~~~~^~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5340:32: note: place parentheses around the '&&' expression to silence this warning if ( !bMobileHFrom && bIsoFrom || bMobileHFrom && !bIsoFrom ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5340:60: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !bMobileHFrom && bIsoFrom || bMobileHFrom && !bIsoFrom ) { ~~ ~~~~~~~~~~~~~^~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5340:60: note: place parentheses around the '&&' expression to silence this warning :5898 if ( !bMobileHFrom && bIsoFrom || bMobileHFrom && !bIsoFrom ) { ^:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(*pStart) && ~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c: ( )5898:32: note: place parentheses around the '&&' expression to silence this warning if ( (isdigit(*pStart) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5399:40: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pStereo[0]->t_parity && ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5399:40: note: place parentheses around the '&&' expression to silence this warning if ( !pStereo[0]->t_parity && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5401:39: warning: '&&' within '||' [-Wlogical-op-parentheses] !pStereo[0]->nNumber && ~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5401:39: note: place parentheses around the '&&' expression to silence this warning !pStereo[0]->nNumber && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6133:66: warning: '&&' within '||' [-Wlogical-op-parentheses] pStereo[0]->nBondAtom1[iBond-1] == nAtom1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6133:66: note: place parentheses around the '&&' expression to silence this warning pStereo[0]->nBondAtom1[iBond-1] == nAtom1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5505:40: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pStereo[0]->b_parity && ~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5505:40: note: place parentheses around the '&&' expression to silence this warning if ( !pStereo[0]->b_parity && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5507:42: warning: '&&' within '||' [-Wlogical-op-parentheses] !pStereo[0]->nBondAtom1 && ~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5507:42: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6160:66: warning: '&&' within '||' [-Wlogical-op-parentheses]note: place parentheses around the '&&' expression to silence this warning !pStereo[0]->nBondAtom1 && ^ pStereo[0]->nBondAtom1[iBond-1] == nAtom1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6160:66: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5509:42: warning: '&&' within '||' [-Wlogical-op-parentheses] : !pStereo[0]->nBondAtom2 && ~~~~~~~~~~~~~~~~~~~~~~~~^~ place parentheses around the '&&' expression to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5509:42 : pStereo[0]->nBondAtom1[iBond-1] == nAtom1 && ^ note: place parentheses around the '&&' expression to silence this warning !pStereo[0]->nBondAtom2 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5541:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(*pStart) && ~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5541:32: note: place parentheses around the '&&' expression to silence this warning if ( (isdigit(*pStart) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6279:38: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(UCINT *pStart) && ~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6279:38: note: place parentheses around the '&&' expression to silence this warning if ( (isdigit(UCINT *pStart) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6543:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( curAtom = nxtAtom = (int)inchi_strtol( p, &q, base ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6543:30: note: place parentheses around the assignment to silence this warning if ( curAtom = nxtAtom = (int)inchi_strtol( p, &q, base ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6543:30: note: use '==' to turn this assignment into an equality comparison if ( curAtom = nxtAtom = (int)inchi_strtol( p, &q, base ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5898:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(*pStart) && ~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:5898:32: note: place parentheses around the '&&' expression to silence this warning if ( (isdigit(*pStart) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6649:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = t ) { ~~^~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6649:16: note: place parentheses around the assignment to silence this warning if ( p = t ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6649:16: note: use '==' to turn this assignment into an equality comparison if ( p = t ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6742:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !num_Atoms || p < pEnd && !isdigit( UCINT *p) ) { ~~ ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6742:49: note: place parentheses around the '&&' expression to silence this warning if ( !num_Atoms || p < pEnd && !isdigit( UCINT *p) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6133:66: warning: '&&' within '||' [-Wlogical-op-parentheses] pStereo[0]->nBondAtom1[iBond-1] == nAtom1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6133:66: note: place parentheses around the '&&' expression to silence this warning pStereo[0]->nBondAtom1[iBond-1] == nAtom1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6160:66: warning: '&&' within '||' [-Wlogical-op-parentheses] pStereo[0]->nBondAtom1[iBond-1] == nAtom1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6160:66: note: place parentheses around the '&&' expression to silence this warning pStereo[0]->nBondAtom1[iBond-1] == nAtom1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6279:38: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (isdigit(UCINT *pStart) && ~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6279:38: note: place parentheses around the '&&' expression to silence this warning if ( (isdigit(UCINT *pStart) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7253:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7253:30: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7253:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6543:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :7260:42: if ( curAtom = nxtAtom = (int)inchi_strtol( p, &q, base ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6543:30: note: place parentheses around the assignment to silence this warning if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { if ( curAtom = nxtAtom = (int)inchi_strtol( p, &q, base ) ) { ^ ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c: ( )7260:42: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c::7260:42: note: use '==' to turn this assignment into an equality comparison 6543 if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ^ == :30:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7261:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7261:42: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) if ( curAtom = nxtAtom = (int)inchi_strtol( p, &q, base ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7261:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7275:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7275:42: note: place parentheses around the assignment to silence this warning if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6649:16:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7275:42: note warning: use '==' to turn this assignment into an equality comparison : using the result of an assignment as a condition without parentheses [-Wparentheses] if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ^ == if ( p = t ) { ~~^~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6649:16: note: place parentheses around the assignment to silence this warning if ( p = t ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6649:16: note: use '==' to turn this assignment into an equality comparison if ( p = t ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7276:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7276:42: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6742:49: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7276:42: note: use '==' to turn this assignment into an equality comparison : '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == if ( !num_Atoms || p < pEnd && !isdigit( UCINT *p) ) { ~~ ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:6742:49: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7319:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: place parentheses around the '&&' expression to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( !num_Atoms || p < pEnd && !isdigit( UCINT *p) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7319:38: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7319:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7335:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[--num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7335:38: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[--num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7335:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[--num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7347:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open-1], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7347:38: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open-1], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7347:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open-1], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7354:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7354:38: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7354:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7376:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( j = pLB->pBond[i+1].prev ) { ~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7376:24: note: place parentheses around the assignment to silence this warning if ( j = pLB->pBond[i+1].prev ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7376:24: note: use '==' to turn this assignment into an equality comparison if ( j = pLB->pBond[i+1].prev ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7253:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7253:30: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7253:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7260:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7260:42: note: place parentheses around the assignment to silence this warning if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7260:42: note: use '==' to turn this assignment into an equality comparison if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7261:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7261:42: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7261/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7573:55: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :42: if ( pInpInChI[bMobileH][i].nAtom = (U_CHAR *) inchi_malloc( (len + 1) * sizeof(pInpInChI[0][0].nAtom[0]) ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7573:55: note: place parentheses around the assignment to silence this warning note: use '==' to turn this assignment into an equality comparison if ( pInpInChI[bMobileH][i].nAtom = (U_CHAR *) inchi_malloc( (len + 1) * sizeof(pInpInChI[0][0].nAtom[0]) ) ) { ^ ( ) if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7573:55: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7275use '==' to turn this assignment into an equality comparison :42: if ( pInpInChI[bMobileH][i].nAtom = (U_CHAR *) inchi_malloc( (len + 1) * sizeof(pInpInChI[0][0].nAtom[0]) ) ) { ^ == warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7275:42/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7584:63: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : note if ( pInpInChI[bMobileH][i].szHillFormula = (char *) inchi_malloc( inchi_max(len,2) ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:: place parentheses around the assignment to silence this warning 7584: if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:63: note: place parentheses around the assignment to silence this warning 7275:42 if ( pInpInChI[bMobileH][i].szHillFormula = (char *) inchi_malloc( inchi_max(len,2) ) ) { ^ : note: use '==' to turn this assignment into an equality comparison ( ) if ( curAtom = (AT_NUMB)inchi_strtol( p, &q, base ) ) { ^ ==/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7584:63: note: use '==' to turn this assignment into an equality comparison if ( pInpInChI[bMobileH][i].szHillFormula = (char *) inchi_malloc( inchi_max(len,2) ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7276:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7276:42: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7276:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7319:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7319:38: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7319:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7335:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[--num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7335:38: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[--num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7335:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[--num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7347:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open-1], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7347:38: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open-1], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7347:38:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7807: note: use '==' to turn this assignment into an equality comparison45: warning: '&&' within '||' [-Wlogical-op-parentheses] stereoFrom->nBondAtom1 && ~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7807:45: note: place parentheses around the '&&' expression to silence this warning stereoFrom->nBondAtom1 && ^ if ( ret = AddLinkedBond( last_atom[num_open-1], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7354:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7354:38: note: place parentheses around the assignment to silence this warning if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7354:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddLinkedBond( last_atom[num_open], curAtom, (AT_NUMB)nNumAtoms, pLB ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7376:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( j = pLB->pBond[i+1].prev ) { ~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7376:24: note: place parentheses around the assignment to silence this warning if ( j = pLB->pBond[i+1].prev ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7376:24: note: use '==' to turn this assignment into an equality comparison if ( j = pLB->pBond[i+1].prev ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c ^ == :7860:43: warning: '&&' within '||' [-Wlogical-op-parentheses] stereoFrom->t_parity && ~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7860:43: note: place parentheses around the '&&' expression to silence this warning stereoFrom->t_parity && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7573:55: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pInpInChI[bMobileH][i].nAtom = (U_CHAR *) inchi_malloc( (len + 1) * sizeof(pInpInChI[0][0].nAtom[0]) ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7573:55: note: place parentheses around the assignment to silence this warning if ( pInpInChI[bMobileH][i].nAtom = (U_CHAR *) inchi_malloc( (len + 1) * sizeof(pInpInChI[0][0].nAtom[0]) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7573:55: note: use '==' to turn this assignment into an equality comparison if ( pInpInChI[bMobileH][i].nAtom = (U_CHAR *) inchi_malloc( (len + 1) * sizeof(pInpInChI[0][0].nAtom[0]) ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7584:63: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pInpInChI[bMobileH][i].szHillFormula = (char *) inchi_malloc( inchi_max(len,2) ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7584:63: note: place parentheses around the assignment to silence this warning if ( pInpInChI[bMobileH][i].szHillFormula = (char *) inchi_malloc( inchi_max(len,2) ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7584:63: note: use '==' to turn this assignment into an equality comparison if ( pInpInChI[bMobileH][i].szHillFormula = (char *) inchi_malloc( inchi_max(len,2) ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7807:45: warning: '&&' within '||' [-Wlogical-op-parentheses] stereoFrom->nBondAtom1 && ~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7807:45: note: place parentheses around the '&&' expression to silence this warning stereoFrom->nBondAtom1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7860:43: warning: '&&' within '||' [-Wlogical-op-parentheses] stereoFrom->t_parity && ~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichiread.c:7860:43: note: place parentheses around the '&&' expression to silence this warning stereoFrom->t_parity && ^ Scanning dependencies of target RDGeometryLib_static [ 12%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib_static.dir/point.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/Dict.cpp:14: In file included from /sw/include/boost-1_53/boost/shared_array.hpp:17: In file included from /sw/include/boost-1_53/boost/smart_ptr/shared_array.hpp:28: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. 68 warnings generated. 68 warnings generated. [ 12%] [ 12%] [ 12%] [ 12%] [ 13%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs_static.dir/DiscreteDistMat.cpp.o Building CXX object Code/RDGeneral/CMakeFiles/RDGeneral_static.dir/Dict.cpp.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichirvr1.c.o Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichirvr1.c.o Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib_static.dir/Transform2D.cpp.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:688:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:688:15:15: warning: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)p1->nValence - (int)p2->nValence ) /* smaller valence first */ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( diff = (int)p1->nValence - (int)p2->nValence ) /* smaller valence first */ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:688:15: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c if ( diff = (int)p1->nValence - (int)p2->nValence ) /* smaller valence first */:688:15: note : ^ ( ) place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:688:15: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)p1->nValence - (int)p2->nValence ) /* smaller valence first */ ^ ( ) if ( diff = (int)p1->nValence - (int)p2->nValence ) /* smaller valence first */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:688:15: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)p1->nValence - (int)p2->nValence ) /* smaller valence first */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:690:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:690:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = abs((int)p1->nCharge) - abs((int)p2->nCharge )) /* smaller abs charge first */ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:690:15: note: place parentheses around the assignment to silence this warning if ( diff = abs((int)p1->nCharge) - abs((int)p2->nCharge )) /* smaller abs charge first */ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:690:15: note: if ( diff = abs((int)p1->nCharge) - abs((int)p2->nCharge )) /* smaller abs charge first */ place parentheses around the assignment to silence this warning ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:690:15: note: use '==' to turn this assignment into an equality comparison if ( diff = abs((int)p1->nCharge) - abs((int)p2->nCharge )) /* smaller abs charge first */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c: if ( diff = abs((int)p1->nCharge) - abs((int)p2->nCharge )) /* smaller abs charge first */690 : ^ == 15: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:692:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = abs((int)p1->nCharge) - abs((int)p2->nCharge )) /* smaller abs charge first */ ^ == if ( diff = (int)p2->nCharge - (int)p1->nCharge ) /* (+) first, (-) second */ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:692:15: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:692:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( diff = (int)p2->nCharge - (int)p1->nCharge ) /* (+) first, (-) second */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:692:15: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)p2->nCharge - (int)p1->nCharge ) /* (+) first, (-) second */ ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( diff = (int)p2->nCharge - (int)p1->nCharge ) /* (+) first, (-) second */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:692:15: note: place parentheses around the assignment to silence this warning if ( diff = (int)p2->nCharge - (int)p1->nCharge ) /* (+) first, (-) second */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:692:15: note: use '==' to turn this assignment into an equality comparison if ( diff = (int)p2->nCharge - (int)p1->nCharge ) /* (+) first, (-) second */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:712:27: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] for ( b = szEl; e = strchr( b, ';'); b = e+1 ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c ~~^~~~~~~~~~~~~~~~~:712:27: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:712:27: note: place parentheses around the assignment to silence this warning for ( b = szEl; e = strchr( b, ';'); b = e+1 ) { ~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:712: for ( b = szEl; e = strchr( b, ';'); b = e+1 ) { 27 ^: ( )note : place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:712:27: note: use '==' to turn this assignment into an equality comparison for ( b = szEl; e = strchr( b, ';'); b = e+1 ) { ^ for ( b = szEl; e = strchr( b, ';'); b = e+1 ) { ( ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:712:27: note: use '==' to turn this assignment into an equality comparison for ( b = szEl; e = strchr( b, ';'); b = e+1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:720:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = (char *)memchr( en, at[iat].el_number, ne ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:720:12: note: place parentheses around the assignment to silence this warning if ( p = (char *)memchr( en, at[iat].el_number, ne ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:720:12: warning:: 720using the result of an assignment as a condition without parentheses [-Wparentheses]: 12: note: use '==' to turn this assignment into an equality comparison if ( p = (char *)memchr( en, at[iat].el_number, ne ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( p = (char *)memchr( en, at[iat].el_number, ne ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:720:12: note: place parentheses around the assignment to silence this warning if ( p = (char *)memchr( en, at[iat].el_number, ne ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:720:12: note: use '==' to turn this assignment into an equality comparison if ( p = (char *)memchr( en, at[iat].el_number, ne ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:781:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (bTautomeric || j && bFixedHTautomeric) && pChargeVal[i].nCharge < 0 ) { ~~ ~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:781:32: note: place parentheses around the '&&' expression to silence this warning if ( (bTautomeric || j && bFixedHTautomeric) && pChargeVal[i].nCharge < 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:781:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (bTautomeric || j && bFixedHTautomeric) && pChargeVal[i].nCharge < 0 ) { ~~ ~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:781:32: note: place parentheses around the '&&' expression to silence this warning if ( (bTautomeric || j && bFixedHTautomeric) && pChargeVal[i].nCharge < 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1505:18: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nStereo && pSrm->bFixStereoBonds || !nMetal || !pSrm->bMetalAddFlower ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1505:18: note: place parentheses around the '&&' expression to silence this warning if ( nStereo && pSrm->bFixStereoBonds || !nMetal || !pSrm->bMetalAddFlower ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1525:75: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pVA[iat].cMetal && !at->endpoint && !pVA[neigh].cMetal && atom[neigh].endpoint|| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1525:75: note: place parentheses around the '&&' expression to silence this warning if ( pVA[iat].cMetal && !at->endpoint && !pVA[neigh].cMetal && atom[neigh].endpoint|| ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1526:75: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[neigh].cMetal && !atom[neigh].endpoint && !pVA[iat].cMetal && at->endpoint ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1526:75: note: place parentheses around the '&&' expression to silence this warning pVA[neigh].cMetal && !atom[neigh].endpoint && !pVA[iat].cMetal && at->endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1505:18: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( nStereo && pSrm->bFixStereoBonds || !nMetal || !pSrm->bMetalAddFlower ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1505:18: note: place parentheses around the '&&' expression to silence this warning if ( nStereo && pSrm->bFixStereoBonds || !nMetal || !pSrm->bMetalAddFlower ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1525:75: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pVA[iat].cMetal && !at->endpoint && !pVA[neigh].cMetal && atom[neigh].endpoint|| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1525:75: note: place parentheses around the '&&' expression to silence this warning if ( pVA[iat].cMetal && !at->endpoint && !pVA[neigh].cMetal && atom[neigh].endpoint|| ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1526:75: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[neigh].cMetal && !atom[neigh].endpoint && !pVA[iat].cMetal && at->endpoint ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:1526:75: note: place parentheses around the '&&' expression to silence this warning pVA[neigh].cMetal && !atom[neigh].endpoint && !pVA[iat].cMetal && at->endpoint ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2000:74: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pTCGroups->nGroup[k] >= 0 || pTCGroups->pTCG[i].ord_num && !IS_BNS_VT_M_GR(pTCGroups->pTCG[i].type) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2000:74: note: place parentheses around the '&&' expression to silence this warning if ( pTCGroups->nGroup[k] >= 0 || pTCGroups->pTCG[i].ord_num && !IS_BNS_VT_M_GR(pTCGroups->pTCG[i].type) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2000:74: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pTCGroups->nGroup[k] >= 0 || pTCGroups->pTCG[i].ord_num && !IS_BNS_VT_M_GR(pTCGroups->pTCG[i].type) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2000:74: note: place parentheses around the '&&' expression to silence this warning if ( pTCGroups->nGroup[k] >= 0 || pTCGroups->pTCG[i].ord_num && !IS_BNS_VT_M_GR(pTCGroups->pTCG[i].type) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2986:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( IS_BNS_VT_M_GR( pCN[i1].v.type ) && IS_BNS_VT_ATOM( pCN[i2].v.type ) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2986:59: note: place parentheses around the '&&' expression to silence this warning if ( IS_BNS_VT_M_GR( pCN[i1].v.type ) && IS_BNS_VT_ATOM( pCN[i2].v.type ) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2987:59: warning: '&&' within '||' [-Wlogical-op-parentheses] IS_BNS_VT_M_GR( pCN[i2].v.type ) && IS_BNS_VT_ATOM( pCN[i1].v.type ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2987:59: note: place parentheses around the '&&' expression to silence this warning IS_BNS_VT_M_GR( pCN[i2].v.type ) && IS_BNS_VT_ATOM( pCN[i1].v.type ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3074:42: warning: '&&' within '||' [-Wlogical-op-parentheses] (pVA[c_point].cMetal && pVA[c_point].cNumBondsToMetal || ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3074:42: note: place parentheses around the '&&' expression to silence this warning (pVA[c_point].cMetal && pVA[c_point].cNumBondsToMetal || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3075:42: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[c_neigh].cMetal && pVA[c_neigh].cNumBondsToMetal) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3075:42: note: place parentheses around the '&&' expression to silence this warning pVA[c_neigh].cMetal && pVA[c_neigh].cNumBondsToMetal) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2986:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( IS_BNS_VT_M_GR( pCN[i1].v.type ) && IS_BNS_VT_ATOM( pCN[i2].v.type ) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2986:59: note: place parentheses around the '&&' expression to silence this warning if ( IS_BNS_VT_M_GR( pCN[i1].v.type ) && IS_BNS_VT_ATOM( pCN[i2].v.type ) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2987:59: warning: '&&' within '||' [-Wlogical-op-parentheses] IS_BNS_VT_M_GR( pCN[i2].v.type ) && IS_BNS_VT_ATOM( pCN[i1].v.type ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:2987:59: note: place parentheses around the '&&' expression to silence this warning IS_BNS_VT_M_GR( pCN[i2].v.type ) && IS_BNS_VT_ATOM( pCN[i1].v.type ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3074:42: warning: '&&' within '||' [-Wlogical-op-parentheses] (pVA[c_point].cMetal && pVA[c_point].cNumBondsToMetal || ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3074:42: note: place parentheses around the '&&' expression to silence this warning (pVA[c_point].cMetal && pVA[c_point].cNumBondsToMetal || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3075:42: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[c_neigh].cMetal && pVA[c_neigh].cNumBondsToMetal) ) { ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3075:42: note: place parentheses around the '&&' expression to silence this warning pVA[c_neigh].cMetal && pVA[c_neigh].cNumBondsToMetal) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3845:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p2->cMetal - (int)p1->cMetal ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3845:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p2->cMetal - (int)p1->cMetal ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3845:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p2->cMetal - (int)p1->cMetal ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3847:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p2->cNumBondsToMetal - (int)p1->cNumBondsToMetal ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3847:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p2->cNumBondsToMetal - (int)p1->cNumBondsToMetal ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3847:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p2->cNumBondsToMetal - (int)p1->cNumBondsToMetal ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3849:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p2->cPeriodicRowNumber - (int)p1->cPeriodicRowNumber ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3849:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p2->cPeriodicRowNumber - (int)p1->cPeriodicRowNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3849:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p2->cPeriodicRowNumber - (int)p1->cPeriodicRowNumber ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3851:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p2->num_bonds - (int)p1->num_bonds ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3851:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p2->num_bonds - (int)p1->num_bonds ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3851:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p2->num_bonds - (int)p1->num_bonds ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3853:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p1->chem_valence - (int)p2->chem_valence ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3853:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p1->chem_valence - (int)p2->chem_valence ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3853:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p1->chem_valence - (int)p2->chem_valence ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3845:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p2->cMetal - (int)p1->cMetal ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3845:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p2->cMetal - (int)p1->cMetal ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3845:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p2->cMetal - (int)p1->cMetal ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3847:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p2->cNumBondsToMetal - (int)p1->cNumBondsToMetal ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3847:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p2->cNumBondsToMetal - (int)p1->cNumBondsToMetal ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3847:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p2->cNumBondsToMetal - (int)p1->cNumBondsToMetal ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3849:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p2->cPeriodicRowNumber - (int)p1->cPeriodicRowNumber ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3849:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p2->cPeriodicRowNumber - (int)p1->cPeriodicRowNumber ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3849:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p2->cPeriodicRowNumber - (int)p1->cPeriodicRowNumber ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3851:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p2->num_bonds - (int)p1->num_bonds ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3851:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p2->num_bonds - (int)p1->num_bonds ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3851:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p2->num_bonds - (int)p1->num_bonds ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3853:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)p1->chem_valence - (int)p2->chem_valence ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3853:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)p1->chem_valence - (int)p2->chem_valence ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3853:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)p1->chem_valence - (int)p2->chem_valence ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3967:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( pEdges, pEdges->num_alloc + nAddLen ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3967:18: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( pEdges, pEdges->num_alloc + nAddLen ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3967:18: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( pEdges, pEdges->num_alloc + nAddLen ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3967:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4007:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( pEdges, pEdges->num_alloc + nAddLen ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:3967:18: note: place parentheses around the assignment to silence this warning if ( ret = RemoveFromEdgeListByIndex( pEdges, i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4007:22: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( pEdges, pEdges->num_alloc + nAddLen ) ) { ^ ( ) if ( ret = RemoveFromEdgeListByIndex( pEdges, i ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c ( ): 3967:18:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4007:22: note: use '==' to turn this assignment into an equality comparison note: use '==' to turn this assignment into an equality comparison if ( ret = RemoveFromEdgeListByIndex( pEdges, i ) ) { ^ == if ( ret = AllocEdgeList( pEdges, pEdges->num_alloc + nAddLen ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4007:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = RemoveFromEdgeListByIndex( pEdges, i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4007:22: note: place parentheses around the assignment to silence this warning if ( ret = RemoveFromEdgeListByIndex( pEdges, i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4007:22: note: use '==' to turn this assignment into an equality comparison if ( ret = RemoveFromEdgeListByIndex( pEdges, i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4367:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( i = bNumHeterAtomHasIsotopicH( at3, num_atoms ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4367:12: note: place parentheses around the assignment to silence this warning if ( i = bNumHeterAtomHasIsotopicH( at3, num_atoms ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4367:12: note: use '==' to turn this assignment into an equality comparison if ( i = bNumHeterAtomHasIsotopicH( at3, num_atoms ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4389:30: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4389:30: note: place parentheses around the '&&' expression to silence this warning if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4390:30: warning: '&&' within '||' [-Wlogical-op-parentheses] k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) { ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4390:30: note: place parentheses around the '&&' expression to silence this warning k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4367:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( i = bNumHeterAtomHasIsotopicH( at3, num_atoms ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4367:12: note: place parentheses around the assignment to silence this warning if ( i = bNumHeterAtomHasIsotopicH( at3, num_atoms ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4367:12: note: use '==' to turn this assignment into an equality comparison if ( i = bNumHeterAtomHasIsotopicH( at3, num_atoms ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4389:30: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4389:30: note: place parentheses around the '&&' expression to silence this warning if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4390:30: warning: '&&' within '||' [-Wlogical-op-parentheses] k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) { ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr1.c:4390:30: note: place parentheses around the '&&' expression to silence this warning k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) { ^ ( ) In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteDistMat.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteDistMat.h:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.h:13: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 24 warnings generated. 3 warnings generated. 24 warnings generated. 3 warnings generated. [ 13%] [ 13%] [ 14%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichirvr2.c.o Building CXX object Code/DataStructs/CMakeFiles/DataStructs_static.dir/DiscreteValueVect.cpp.o Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichirvr2.c.o Linking CXX shared library ../../lib/libRDGeneral.dylib 3 warnings generated. Linking CXX static library libRDInchiLib_static.a /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:187:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:187:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = GetTgroupInfoFromInChI( &pStruct->ti, at, NULL, pInChI ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:187:14: note: place parentheses around the assignment to silence this warning if ( ret = GetTgroupInfoFromInChI( &pStruct->ti, at, NULL, pInChI ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = GetTgroupInfoFromInChI( &pStruct->ti, at, NULL, pInChI ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:187:14: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cnote:187:14: use '==' to turn this assignment into an equality comparison : note: place parentheses around the assignment to silence this warning if ( ret = GetTgroupInfoFromInChI( &pStruct->ti, at, NULL, pInChI ) ) { ^ == if ( ret = GetTgroupInfoFromInChI( &pStruct->ti, at, NULL, pInChI ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:187:14: note: use '==' to turn this assignment into an equality comparison if ( ret = GetTgroupInfoFromInChI( &pStruct->ti, at, NULL, pInChI ) ) { ^ == In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.h:13: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:263:24: warning:263:24:: unsequenced modification and access to 'jn' [-Wunsequenced] warning: unsequenced modification and access to 'jn' [-Wunsequenced] at[jn = at[n_vertex].neighbor[1]].valence + at[jn].num_H == 3 && ^ ~~ at[jn = at[n_vertex].neighbor[1]].valence + at[jn].num_H == 3 && ^ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:261:24: warning: unsequenced modification and access to 'jv' [-Wunsequenced] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:261:24: warning: unsequenced modification and access to 'jv' [-Wunsequenced] at[jv = at[n_vertex].neighbor[0]].valence + at[jv].num_H == 3 && ^ ~~ at[jv = at[n_vertex].neighbor[0]].valence + at[jv].num_H == 3 && ^ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:289:44: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:289:44: warning if ( diff < 0 || diff == 0 && diff2 <= 0) { ~~ ~~~~~~~~~~^~~~~~~~~~~~~ : '&&' within '||' [-Wlogical-op-parentheses] if ( diff < 0 || diff == 0 && diff2 <= 0) { ~~ ~~~~~~~~~~^~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:289:44: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cnote:: 289:44place parentheses around the '&&' expression to silence this warning : note: place parentheses around the '&&' expression to silence this warning if ( diff < 0 || diff == 0 && diff2 <= 0) { ^ ( ) if ( diff < 0 || diff == 0 && diff2 <= 0) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::770:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( charge = pe->flow ) { ~~~~~~~^~~~~~~~~~ 770/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:770:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :25: note: place parentheses around the assignment to silence this warning if ( charge = pe->flow ) { ~~~~~~~^~~~~~~~~~ if ( charge = pe->flow ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:770:25: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:770:25: note: use '==' to turn this assignment into an equality comparison if ( charge = pe->flow ) { ^ ( ) if ( charge = pe->flow ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:770:25: note: use '==' to turn this assignment into an equality comparison if ( charge = pe->flow ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:777:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( charge = pe->cap - pe->flow ) { ~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:777:25: note: place parentheses around the assignment to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:777: 25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( charge = pe->cap - pe->flow ) { ^ ( ) if ( charge = pe->cap - pe->flow ) { ~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:777/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::25777:: 25note:: use '==' to turn this assignment into an equality comparisonnote : place parentheses around the assignment to silence this warning if ( charge = pe->cap - pe->flow ) { if ( charge = pe->cap - pe->flow ) { ^ ^ ( ) ==/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:777:25 : note: use '==' to turn this assignment into an equality comparison if ( charge = pe->cap - pe->flow ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:789:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( charge = pv->st_edge.cap - pv->st_edge.flow ) {: 789: ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~21 /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:789:: 21warning:: using the result of an assignment as a condition without parentheses [-Wparentheses] note: place parentheses around the assignment to silence this warning if ( charge = pv->st_edge.cap - pv->st_edge.flow ) { ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: if ( charge = pv->st_edge.cap - pv->st_edge.flow ) {789 : ^21 : note ( ) : place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:789:21: note: use '==' to turn this assignment into an equality comparison if ( charge = pv->st_edge.cap - pv->st_edge.flow ) { ^ if ( charge = pv->st_edge.cap - pv->st_edge.flow ) { ( ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:789:21: note: use '==' to turn this assignment into an equality comparison if ( charge = pv->st_edge.cap - pv->st_edge.flow ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1338:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( p1 = is_in_the_list( at[i1].neighbor, (AT_NUMB)idelH1, at[i1].valence ) ) { ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~:1338:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1338:17: note: place parentheses around the assignment to silence this warning if ( p1 = is_in_the_list( at[i1].neighbor, (AT_NUMB)idelH1, at[i1].valence ) ) { ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1338 if ( p1 = is_in_the_list( at[i1].neighbor, (AT_NUMB)idelH1, at[i1].valence ) ) {: 17 ^: note: ( ) place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1338:17: note: use '==' to turn this assignment into an equality comparison if ( p1 = is_in_the_list( at[i1].neighbor, (AT_NUMB)idelH1, at[i1].valence ) ) { ^ ( ) if ( p1 = is_in_the_list( at[i1].neighbor, (AT_NUMB)idelH1, at[i1].valence ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1338:17: note: use '==' to turn this assignment into an equality comparison if ( p1 = is_in_the_list( at[i1].neighbor, (AT_NUMB)idelH1, at[i1].valence ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1349:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( p2 = is_in_the_list( at[i2].neighbor, (AT_NUMB)idelH2, at[i2].valence ) ) {: 1349 ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 17:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1349: 17warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : note: place parentheses around the assignment to silence this warning if ( p2 = is_in_the_list( at[i2].neighbor, (AT_NUMB)idelH2, at[i2].valence ) ) { ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( p2 = is_in_the_list( at[i2].neighbor, (AT_NUMB)idelH2, at[i2].valence ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c ^ ( ) :1349:17/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:: 1349note:: 17:place parentheses around the assignment to silence this warning note: use '==' to turn this assignment into an equality comparison if ( p2 = is_in_the_list( at[i2].neighbor, (AT_NUMB)idelH2, at[i2].valence ) ) { ^ ( ) if ( p2 = is_in_the_list( at[i2].neighbor, (AT_NUMB)idelH2, at[i2].valence ) ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c : ==1349 :17: note: use '==' to turn this assignment into an equality comparison if ( p2 = is_in_the_list( at[i2].neighbor, (AT_NUMB)idelH2, at[i2].valence ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1526:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { : ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~1526 :24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1526:24: note: place parentheses around the assignment to silence this warning if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1526:24: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cnote: place parentheses around the assignment to silence this warning :1526:24: note: use '==' to turn this assignment into an equality comparison if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1526:24: note: use '==' to turn this assignment into an equality comparison if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { ^ == if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::15971597::3232:: warningwarning: : using the result of an assignment as a condition without parentheses [-Wparentheses]using the result of an assignment as a condition without parentheses [-Wparentheses] if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1597:32: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1597:32: note: place parentheses around the assignment to silence this warning if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1597:32 if ( delta = pv->st_edge.cap - pv->st_edge.flow ) {: ^note : ( )use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1597:32: note: use '==' to turn this assignment into an equality comparison if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { ^ == if ( delta = pv->st_edge.cap - pv->st_edge.flow ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1791/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1791:49: warning: '&&' within '||' [-Wlogical-op-parentheses] :49: warning: '&&' within '||' [-Wlogical-op-parentheses] num_eql_mobile_gr == num_endpoints && !num_forbidden || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c num_eql_mobile_gr == num_endpoints && !num_forbidden || : ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~1791 :/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c49: :note: place parentheses around the '&&' expression to silence this warning 1791:49: note: place parentheses around the '&&' expression to silence this warning num_eql_mobile_gr == num_endpoints && !num_forbidden || ^ ( ) num_eql_mobile_gr == num_endpoints && !num_forbidden || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1792:25: warning: '&&' within '||' [-Wlogical-op-parentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c :1792:25: warning: '&&' within '||' [-Wlogical-op-parentheses] !tg_number && !has_mobile_H ) { ~~~~~~~~~~~^~~~~~~~~~~~~~~~ !tg_number && !has_mobile_H ) { ~~~~~~~~~~~^~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:1792:25: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: :place parentheses around the '&&' expression to silence this warning 1792:25: note: place parentheses around the '&&' expression to silence this warning !tg_number && !has_mobile_H ) { ^ ( ) !tg_number && !has_mobile_H ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2293:78: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2293:78: warning: '&&' within '||' [-Wlogical-op-parentheses] (MobileGr[j].atom_type_pVA & (EL_TYPE_O | EL_TYPE_S)) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: (MobileGr[j].atom_type_pVA & (EL_TYPE_O | EL_TYPE_S)) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 2293:78:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2293:78: note: place parentheses around the '&&' expression to silence this warning note: place parentheses around the '&&' expression to silence this warning (MobileGr[j].atom_type_pVA & (EL_TYPE_O | EL_TYPE_S)) && ^ (MobileGr[j].atom_type_pVA & (EL_TYPE_O | EL_TYPE_S)) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2477:78: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2477:78: warning: '&&' within '||' [-Wlogical-op-parentheses] (MobileGr[j].atom_type_pVA & (EL_TYPE_O | EL_TYPE_S)) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c (MobileGr[j].atom_type_pVA & (EL_TYPE_O | EL_TYPE_S)) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ :2477:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c78:: note: place parentheses around the '&&' expression to silence this warning 2477:78: note: place parentheses around the '&&' expression to silence this warning (MobileGr[j].atom_type_pVA & (EL_TYPE_O | EL_TYPE_S)) && ^ (MobileGr[j].atom_type_pVA & (EL_TYPE_O | EL_TYPE_S)) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2746:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( &NewlyFixedEdges, num_tot + pBNS->num_bonds ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2746/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2746:14: :14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( &NewlyFixedEdges, num_tot + pBNS->num_bonds ) ) { if ( ret = AllocEdgeList( &NewlyFixedEdges, num_tot + pBNS->num_bonds ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2746:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2746:14: note: place parentheses around the assignment to silence this warning 14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &NewlyFixedEdges, num_tot + pBNS->num_bonds ) ) { ^ ( ) if ( ret = AllocEdgeList( &NewlyFixedEdges, num_tot + pBNS->num_bonds ) ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c ==:2746:14 : note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &NewlyFixedEdges, num_tot + pBNS->num_bonds ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2779:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2779:22: if ( ret = AddToEdgeList( &NewlyFixedEdges, eMinus, 0 )) { warning ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2779:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, eMinus, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2779: if ( ret = AddToEdgeList( &NewlyFixedEdges, eMinus, 0 )) {22 : ^ note ( ): /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:place parentheses around the assignment to silence this warning 2779:22: note: if ( ret = AddToEdgeList( &NewlyFixedEdges, eMinus, 0 )) { ^ ( ) use '==' to turn this assignment into an equality comparison/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2779:22: note : use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, eMinus, 0 )) { ^ == if ( ret = AddToEdgeList( &NewlyFixedEdges, eMinus, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2787:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, ePlus, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2787:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( ret = AddToEdgeList( &NewlyFixedEdges, ePlus, 0 )) { : ^2787:22: ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 2787:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, ePlus, 0 )) { if ( ret = AddToEdgeList( &NewlyFixedEdges, ePlus, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2787:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, ePlus, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2787:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2794:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, ePlus, 0 )) { ^ == if ( ret = AddToEdgeList( &NewlyFixedEdges, i, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2794:18: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, i, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2794:18: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2794:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, i, 0 )) { ^ == if ( ret = AddToEdgeList( &NewlyFixedEdges, i, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2794:18: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, i, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2794:18: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, i, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2885:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2885:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2885:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2885:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2885:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2885:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ == if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2899:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2899:34/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::2899:34: note: place parentheses around the assignment to silence this warning warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) {: 2899 ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~:34: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2899:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ == if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2899:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, pe - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2937:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == vMeFlower0 && vPathStart == vNeighMeigh || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2937:58: note: place parentheses around the '&&' expression to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2937:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == vMeFlower0 && vPathStart == vNeighMeigh || if ( ret == 1 && (vPathEnd == vMeFlower0 && vPathStart == vNeighMeigh || ^ ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::29372938::5859: warning: '&&' within '||' [-Wlogical-op-parentheses] : note: place parentheses around the '&&' expression to silence this warning vPathEnd == vNeighMeigh && vPathStart == vMeFlower0) && abs(nDeltaCharge) <= 2 ) { if ( ret == 1 && (vPathEnd == vMeFlower0 && vPathStart == vNeighMeigh || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2938:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c59: note: place parentheses around the '&&' expression to silence this warning :2938:59: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == vNeighMeigh && vPathStart == vMeFlower0) && abs(nDeltaCharge) <= 2 ) { ^ ( ) vPathEnd == vNeighMeigh && vPathStart == vMeFlower0) && abs(nDeltaCharge) <= 2 ) { ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2938:59: note: place parentheses around the '&&' expression to silence this warning vPathEnd == vNeighMeigh && vPathStart == vMeFlower0) && abs(nDeltaCharge) <= 2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2946:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, peZero - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2946:30: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2946:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, peZero - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( ret = AddToEdgeList( &NewlyFixedEdges, peZero - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :2946:30/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2946:30: note:: place parentheses around the assignment to silence this warningnote : use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, peZero - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ ( ) if ( ret = AddToEdgeList( &NewlyFixedEdges, peZero - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:2946:30: ==note : use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, peZero - pBNS->edge, FIX_BOND_ADD_ALLOC )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3028:19: warning: unsequenced modification and access to 'pvS' [-Wunsequenced] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3028:19: warning: unsequenced modification and access to 'pvS' [-Wunsequenced] (pvS = pBNS->vert+i)->st_edge.cap == pvS->st_edge.flow && ^ ~~~ (pvS = pBNS->vert+i)->st_edge.cap == pvS->st_edge.flow && ^ ~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3088:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3088:46: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3088:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 ||/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c : ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~3089:46: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3088:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3089:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3089:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3089:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3219:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == vPlusSuper && vPathStart == vPlusMinus || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3219:58: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: if ( ret == 1 && (vPathEnd == vPlusSuper && vPathStart == vPlusMinus ||3219 : ^58 ( ) : warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3220:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == vPlusSuper && vPathStart == vPlusMinus || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3219 vPathEnd == vPlusMinus && vPathStart == vPlusSuper) && nDeltaCharge < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~:58: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3220:58: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == vPlusSuper && vPathStart == vPlusMinus || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3220:58: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == vPlusMinus && vPathStart == vPlusSuper) && nDeltaCharge < 0 ) { ^ ( ) vPathEnd == vPlusMinus && vPathStart == vPlusSuper) && nDeltaCharge < 0 ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3220:58: note: place parentheses around the '&&' expression to silence this warning vPathEnd == vPlusMinus && vPathStart == vPlusSuper) && nDeltaCharge < 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3719:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3719:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3720:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3720:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3719:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3719:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3720:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3720:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3786:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3786:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3786:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3791:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3791:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3791:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3799:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3799:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3799:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3786:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3804:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3786:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3804:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3786:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3804:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3791:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3810:30 : ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3791:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3810:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3791:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3810:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &AllChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3799:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3799:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3799:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3804:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3804:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3804:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3890:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3890:22/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3810:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c :3810:30: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: :3890:22: note: use '==' to turn this assignment into an equality comparison place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &AllChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3810:30: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3893:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3893:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3893:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3896:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eN34Edge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3896:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eN34Edge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3896:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eN34Edge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3890:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3890:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3890:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3926:42: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3926:42: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3893:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) {3927 : ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::3893:22: warning note: : place parentheses around the assignment to silence this warning '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= -2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c :3927:42: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3893:22: note: use '==' to turn this assignment into an equality comparison vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= -2 ) { ^ ( ) if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3896:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eN34Edge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3896:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eN34Edge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3896:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &IsoCyanoCarbonChargeEdges, eN34Edge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3965:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3965:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3966:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3966:46: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3926:42: warning: '&&' within '||' [-Wlogical-op-parentheses] : place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= 2 ) {: 3926 ^: ( ) 42: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3927:42: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= -2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3927:42: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= -2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3965:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3965:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3966:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:3966:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= 2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4058:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4058:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4058:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4064:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4064:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4064:34: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4058:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ == if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4058:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4058:34: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4070:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ == if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4070:38: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4064:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) {:4070:38: note: use '==' to turn this assignment into an equality comparison ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4064:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ == if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4064:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4070:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4070:38: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4109:46: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4070:38: note: use '==' to turn this assignment into an equality comparison if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4109:46: note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, num_at ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4110:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge == nDeltaChargeMax*/ ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4110:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge == nDeltaChargeMax*/ ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4109:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4109:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4110:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge == nDeltaChargeMax*/ ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4110:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge == nDeltaChargeMax*/ ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4225:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4225:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4226:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4226:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4225:46: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4232:26 if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 ||: ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~warning : using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4225:46: note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4232:26: note: place parentheses around the assignment to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4226:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4232:26: note: use '==' to turn this assignment into an equality comparison vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4226:46: note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4235:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4232:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4235:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4232:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4235:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4232:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4235:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4235:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4235:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4264:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4264:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4264:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4264:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4264:22: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: place parentheses around the assignment to silence this warning :4272:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4264:22: note if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) {: use '==' to turn this assignment into an equality comparison ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4272:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4272:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4272:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4272:22:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4276:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllNIIIChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4272:22: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cuse '==' to turn this assignment into an equality comparison :4276:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &AllNIIIChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4276:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllNIIIChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4276:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllNIIIChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4276:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllNIIIChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4276:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllNIIIChargeEdges, eNPlusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4326:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllNNNTermAtoms, i, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4326:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllNNNTermAtoms, i, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4326:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllNNNTermAtoms, i, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4326:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllNNNTermAtoms, i, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4326:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllNNNTermAtoms, i, INC_EDGE_LIST ) ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4334:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4326:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4334:26: if ( ret = AddToEdgeList( &AllNNNTermAtoms, i, INC_EDGE_LIST ) ) {note: place parentheses around the assignment to silence this warning ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4334:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4334:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4344:26: warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4334:26: note: place parentheses around the assignment to silence this warning using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c ( ): 4344:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4334:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4344:26: == note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4344:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4354:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: 4344:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c :4354:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4344:26: notenote: : use '==' to turn this assignment into an equality comparisonplace parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c : ==4354 :26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4357:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4354:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4357:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4354:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4357:26: if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { note ^: use '==' to turn this assignment into an equality comparison ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4354:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4357:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4357/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4367:26: :26warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4367:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4357:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4367:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4370:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4367:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4370:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4367:26: note: if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( ) place parentheses around the assignment to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c :4370:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4367:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4370:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4370:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4370:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4447:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4447:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4448:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge <= 2*/ ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4448:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge <= 2*/ ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4447:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4447:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4448:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge <= 2*/ ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4448:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge <= 2*/ ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4521:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4521:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4521:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4524:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4524:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4521:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4524:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4521:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c ^: 4527 ( ): 26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c :4521:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4527:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4527:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4524:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4524:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4530:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4524:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4530:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4527:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4530:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4527:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) {: 4533 ^:26 ( ) : warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4527:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c : ^4533 : ==26 : note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4530:26: if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ ( ) warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4533:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ ==/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4530:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4530:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4543:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4533:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4543:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4533:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4543:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4533:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4546:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4546:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4543:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 4546:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c ==: 4543:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4549:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4543:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4549:26: if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) {note: place parentheses around the assignment to silence this warning ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4546:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4549:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) {:4546:26: note: place parentheses around the assignment to silence this warning ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4546:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cnote: :4552:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4552:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4549:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4552:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4549:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4549:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4552:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4564:26 ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ : /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4552:26:warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4564:26: note: if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) {place parentheses around the assignment to silence this warning ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4552:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4564:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4567:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4567:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4564:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4567:26: note: use '==' to turn this assignment into an equality comparison 26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4564:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4570:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :4564:26/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4570:26: : note: use '==' to turn this assignment into an equality comparison note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4570:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4567:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4567:26: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4573:26: warning: : using the result of an assignment as a condition without parentheses [-Wparentheses]place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4567:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cnote:: 4573:26: note: place parentheses around the assignment to silence this warninguse '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ^ == ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4573:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4570:26: if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) {warning : ^using the result of an assignment as a condition without parentheses [-Wparentheses] == if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4570:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4570:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4589:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4573:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4589:26: ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4573:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4589:26: note if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) {: ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cuse '==' to turn this assignment into an equality comparison: 4573:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4592:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4592:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4592:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4589:26: if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { warning ^: using the result of an assignment as a condition without parentheses [-Wparentheses] == if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4595:26: warning: :using the result of an assignment as a condition without parentheses [-Wparentheses]4589:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4595:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cnote: place parentheses around the assignment to silence this warning:4589:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( ) if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4595:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4592:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4592:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4592:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4607:26: warning: ==using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4595:26: ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4607:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) :/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:45954607:26: :note26: : note: place parentheses around the assignment to silence this warning use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ^ ( ) == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4595:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4610:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4610:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4610:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) {4607 : ^ 26 ==: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::4613:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 4607:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4613:26: if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cplace parentheses around the assignment to silence this warning: 4607:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ if ( ret = AddToEdgeList( &NNNChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ( ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4613:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4610:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4610:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4610:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4624:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4624:26:: 4613:26: warning: note: place parentheses around the assignment to silence this warning using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c ^: 4613 ( ): 26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4624:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4613:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &NNNChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4629:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4624:26:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4629:26: note: place parentheses around the assignment to silence this warning warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge2, INC_EDGE_LIST ) ) { ^ ( ) if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4624:26: note:4629:26: place parentheses around the assignment to silence this warning : note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ^ ( ) if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge2, INC_EDGE_LIST ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4624:26: note == : use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge1, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4629:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4629:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4629:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4657:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &NNNChargeEdges, eNFlowerEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4657:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4658:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= nDeltaChargeMax ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4658:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= nDeltaChargeMax ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4657:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4664::4657:46: note26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4658:46 : warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: :'&&' within '||' [-Wlogical-op-parentheses] 4664:26: note: place parentheses around the assignment to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= nDeltaChargeMax ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4658:46: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cnote: place parentheses around the '&&' expression to silence this warning :4664:26: note: use '==' to turn this assignment into an equality comparison vPathEnd == v2 && vPathStart == v1) && nDeltaCharge <= nDeltaChargeMax ) { ^ ( ) if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4667:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4664:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4667:26: if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4664:26: noteplace parentheses around the assignment to silence this warning: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ^ ( ) ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c :4664:26: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4667:26: note: use '==' to turn this assignment into an equality comparisonuse '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge, INC_EDGE_LIST ) ) { ^ ^ == == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4667:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4670:26: warning: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4670:26: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4667:26: note: place parentheses around the assignment to silence this warning place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { ^ ( ) if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c ( ): /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4667:26: note4670:26: note: use '==' to turn this assignment into an equality comparison : use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge1, INC_EDGE_LIST ) ) { == ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4670:26: warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4673:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4673/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:26: note: place parentheses around the assignment to silence this warning: 4670:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( ) if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::46734670::2626:: notenote: : use '==' to turn this assignment into an equality comparisonuse '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge1, INC_EDGE_LIST ) ) { if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ^ == == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::46764673:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4673/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:26: note: place parentheses around the assignment to silence this warning :4676:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4673:26: note: if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) {use '==' to turn this assignment into an equality comparison ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4676:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNPlusEdge2, INC_EDGE_LIST ) ) { ^ == if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4676:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4676:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4676:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, eNMinusEdge2, INC_EDGE_LIST ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4760:53: warning: '&&' within '||' [-Wlogical-op-parentheses] !(at2[i].endpoint || pStruct->endpoint && pStruct->endpoint[i]) && pVA[i].cnListIndex > 0 && ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4760:53: note: place parentheses around the '&&' expression to silence this warning !(at2[i].endpoint || pStruct->endpoint && pStruct->endpoint[i]) && pVA[i].cnListIndex > 0 &&/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4760: ^53: warning: '&&' within '||' [-Wlogical-op-parentheses] ( ) !(at2[i].endpoint || pStruct->endpoint && pStruct->endpoint[i]) && pVA[i].cnListIndex > 0 && ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4760:53: note: place parentheses around the '&&' expression to silence this warning !(at2[i].endpoint || pStruct->endpoint && pStruct->endpoint[i]) && pVA[i].cnListIndex > 0 && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4925:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4925:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4925:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4925:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4925:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4934:30: if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) {warning : using the result of an assignment as a condition without parentheses [-Wparentheses] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4925:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ ==/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c :4934:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4934:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4934:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4934:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4934:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4954:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4954:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4954:34: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4954:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ == if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4954:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:4954:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &FlowerEdgesList, k, 64 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5020:34: warning: '&&' within '||' [-Wlogical-op-parentheses] (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5020:34: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5020:34: warning: '&&' within '||' [-Wlogical-op-parentheses] (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5020:72: warning: '&&' within '||' [-Wlogical-op-parentheses] (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5020:34: note: place parentheses around the '&&' expression to silence this warning (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ~~ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5020:72: note: place parentheses around the '&&' expression to silence this warning (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5020:72: warning: '&&' within '||' [-Wlogical-op-parentheses] (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ^ ( ) (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ~~ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5020:72: note: place parentheses around the '&&' expression to silence this warning (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5042:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &FlowerEdgesList, nFlowerEdge, 64 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5042:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5042:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &FlowerEdgesList, nFlowerEdge, 64 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5042:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &FlowerEdgesList, nFlowerEdge, 64 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5042:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &FlowerEdgesList, nFlowerEdge, 64 )) { ^ == if ( ret = AddToEdgeList( &FlowerEdgesList, nFlowerEdge, 64 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5042:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &FlowerEdgesList, nFlowerEdge, 64 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5104:26: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5104:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5104:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5104/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::265104:: 26note: place parentheses around the assignment to silence this warning : note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) {: 5104 ^ : ==26 : note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5109:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5109:26: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5109:26: warning: : using the result of an assignment as a condition without parentheses [-Wparentheses]place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5109:26:5109:26: note: use '==' to turn this assignment into an equality comparison: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { ^ ^ ( ) == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5109:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CarbonChargeEdges, k, 64 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5146:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NO_EdgeList, k, 64 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5146/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::514630::30 : note: place parentheses around the assignment to silence this warning warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NO_EdgeList, k, 64 ) ) { ^ ( ) if ( ret = AddToEdgeList( &NO_EdgeList, k, 64 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c::51465146::3030:: note: use '==' to turn this assignment into an equality comparison note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NO_EdgeList, k, 64 ) ) { ^ == if ( ret = AddToEdgeList( &NO_EdgeList, k, 64 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5146:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NO_EdgeList, k, 64 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5174:34: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5174:34: warning: '&&' within '||' [-Wlogical-op-parentheses] (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5174:34: note: place parentheses around the '&&' expression to silence this warning (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5174:34: (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) &¬e : ^place parentheses around the '&&' expression to silence this warning ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5174:72: warning: '&&' within '||' [-Wlogical-op-parentheses] (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5174:72: warning: '&&' within '||' [-Wlogical-op-parentheses] (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ~~ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5174:72: note: place parentheses around the '&&' expression to silence this warning (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ~~ ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5174:72: note: place parentheses around the '&&' expression to silence this warning (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ^ ( ) (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5370:83: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint_found].cNumValenceElectrons == 4 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5370:83: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5370:83: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint_found].cNumValenceElectrons == 4 && ^ pVA[centerpoint_found].cNumValenceElectrons == 4 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5370:83: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5376:92: warning: pVA[centerpoint_found].cNumValenceElectrons == 4 &&'&&' within '||' [-Wlogical-op-parentheses] ^ at[centerpoint].valence == at[centerpoint_found].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5376:92: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5376:92: warning: '&&' within '||' [-Wlogical-op-parentheses] at[centerpoint].valence == at[centerpoint_found].valence && ^ at[centerpoint].valence == at[centerpoint_found].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5374:81: warning: '&&' within '||' [-Wlogical-op-parentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c :5376:92: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint].cPeriodicRowNumber != 1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: at[centerpoint].valence == at[centerpoint_found].valence &&5374:81: note: place parentheses around the '&&' expression to silence this warning ^ pVA[centerpoint].cPeriodicRowNumber != 1 ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5374:81: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint].cPeriodicRowNumber != 1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5374:81: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint].cPeriodicRowNumber != 1 ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5493:83: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint_found].cNumValenceElectrons == 4 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5493:83: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint_found].cNumValenceElectrons == 4 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5493:83: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5499:92: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint_found].cNumValenceElectrons == 4 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5493:83: note: place parentheses around the '&&' expression to silence this warning at[centerpoint].valence == at[centerpoint_found].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5499:92: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint_found].cNumValenceElectrons == 4 && ^ at[centerpoint].valence == at[centerpoint_found].valence && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5497:81: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5499:92: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint].cPeriodicRowNumber != 1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5497:81: note at[centerpoint].valence == at[centerpoint_found].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ : /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.cplace parentheses around the '&&' expression to silence this warning: 5499:92: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint].cPeriodicRowNumber != 1 ) && ^ at[centerpoint].valence == at[centerpoint_found].valence && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5497:81: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint].cPeriodicRowNumber != 1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5497:81: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint].cPeriodicRowNumber != 1 ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5578:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret2 == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5578:59: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5578:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret2 == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5579:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret2 == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5578:59: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5579:59: note: place parentheses around the '&&' expression to silence this warning if ( ret2 == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5579:59: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5579:59: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5771:83: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint_found].cNumValenceElectrons == 4 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5771:83: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint_found].cNumValenceElectrons == 4 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5771:83: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5777:92: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint_found].cNumValenceElectrons == 4 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ at[centerpoint].valence == at[centerpoint_found].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5777:92: note: place parentheses around the '&&' expression to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5771:83: note : place parentheses around the '&&' expression to silence this warning at[centerpoint].valence == at[centerpoint_found].valence && pVA[centerpoint_found].cNumValenceElectrons == 4 && ^ ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5775:81: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint].cPeriodicRowNumber != 1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5777:92: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5775:81: note: place parentheses around the '&&' expression to silence this warning at[centerpoint].valence == at[centerpoint_found].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ pVA[centerpoint].cPeriodicRowNumber != 1 ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5777:92: note: place parentheses around the '&&' expression to silence this warning at[centerpoint].valence == at[centerpoint_found].valence && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5775:81: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint].cPeriodicRowNumber != 1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5775:81: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint].cPeriodicRowNumber != 1 ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5883:83: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint_found].cNumValenceElectrons == 4 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5883:83: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint_found].cNumValenceElectrons == 4 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5883:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5889:92: warning: '&&' within '||' [-Wlogical-op-parentheses] 83: warning: '&&' within '||' [-Wlogical-op-parentheses] at[centerpoint].valence == at[centerpoint_found].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ pVA[centerpoint_found].cNumValenceElectrons == 4 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5883::5889:92: 83note:: place parentheses around the '&&' expression to silence this warningnote : place parentheses around the '&&' expression to silence this warning at[centerpoint].valence == at[centerpoint_found].valence && ^ pVA[centerpoint_found].cNumValenceElectrons == 4 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5887:81: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c pVA[centerpoint].cPeriodicRowNumber != 1 ) &&: 5889 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~: 92: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5887:81: note: place parentheses around the '&&' expression to silence this warning at[centerpoint].valence == at[centerpoint_found].valence && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ pVA[centerpoint].cPeriodicRowNumber != 1 ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5889:92: note: place parentheses around the '&&' expression to silence this warning at[centerpoint].valence == at[centerpoint_found].valence && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5887:81: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[centerpoint].cPeriodicRowNumber != 1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5887:81: note: place parentheses around the '&&' expression to silence this warning pVA[centerpoint].cPeriodicRowNumber != 1 ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5915:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret3 == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5915:51: note: place parentheses around the '&&' expression to silence this warning if ( ret3 == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5916:51: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5915:51: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge % 2 == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5916:51: note: place parentheses around the '&&' expression to silence this warning if ( ret3 == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ vPathEnd == v2 && vPathStart == v1) && nDeltaCharge % 2 == 0 ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5915:51: note: place parentheses around the '&&' expression to silence this warning ^ ( ) if ( ret3 == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5916:51: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge % 2 == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:5916:51: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge % 2 == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6015:53: warning: '&&' within '||' [-Wlogical-op-parentheses] !IS_C(endpoint2_found) && IS_C(endpoint2) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6015:53: note: place parentheses around the '&&' expression to silence this warning !IS_C(endpoint2_found) && IS_C(endpoint2) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6015:53: warning: '&&' within '||' [-Wlogical-op-parentheses] !IS_C(endpoint2_found) && IS_C(endpoint2) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6015:53: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6017:55: warning: '&&' within '||' [-Wlogical-op-parentheses] !IS_C(endpoint2_found) && IS_C(endpoint2) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ !IS_C(centerpoint_found) && IS_C(centerpoint) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6017:55: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6017:55: warning: '&&' within '||' [-Wlogical-op-parentheses] !IS_C(centerpoint_found) && IS_C(centerpoint) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ !IS_C(centerpoint_found) && IS_C(centerpoint) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6017:55: note: place parentheses around the '&&' expression to silence this warning !IS_C(centerpoint_found) && IS_C(centerpoint) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6085:51: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6085:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret2 == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6085: if ( ret2 == 1 && (vPathEnd == v1 && vPathStart == v2 ||51 : ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6085:51: note: place parentheses around the '&&' expression to silence this warning if ( ret2 == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) if ( ret2 == 1 && (vPathEnd == v1 && vPathStart == v2 ||/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6086:51: warning: '&&' within '||' [-Wlogical-op-parentheses] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6086:51: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) {: 6086 ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ :51: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6086:51: place parentheses around the '&&' expression to silence this warningnote: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6162:53: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6162:53: warning: '&&' within '||' [-Wlogical-op-parentheses] !IS_C(endpoint2_found) && IS_C(endpoint1) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6162:53: note: place parentheses around the '&&' expression to silence this warning !IS_C(endpoint2_found) && IS_C(endpoint1) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c !IS_C(endpoint2_found) && IS_C(endpoint1) || : ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~6162:53 : note: place parentheses around the '&&' expression to silence this warning !IS_C(endpoint2_found) && IS_C(endpoint1) || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6164:55: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6164:55: warning: '&&' within '||' [-Wlogical-op-parentheses] !IS_C(centerpoint_found) && IS_C(centerpoint) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6164:55: note !IS_C(centerpoint_found) && IS_C(centerpoint) ) {: place parentheses around the '&&' expression to silence this warning ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6164: !IS_C(centerpoint_found) && IS_C(centerpoint) ) {55 : ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~note : place parentheses around the '&&' expression to silence this warning !IS_C(centerpoint_found) && IS_C(centerpoint) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6280:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( delta = pEdgePlus->flow ) { ~~~~~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6280:28: note: place parentheses around the assignment to silence this warning if ( delta = pEdgePlus->flow ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6280:28: note: use '==' to turn this assignment into an equality comparison if ( delta = pEdgePlus->flow ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6280:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6295:55: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( delta = pEdgePlus->flow ) { ~~~~~~^~~~~~~~~~~~~~~~~ if ( ret == 1 && (vPathEnd == v1p && vPathStart == v2p || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6280:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c28: note: :place parentheses around the assignment to silence this warning6295:55: note: place parentheses around the '&&' expression to silence this warning if ( delta = pEdgePlus->flow ) { ^ ( ) if ( ret == 1 && (vPathEnd == v1p && vPathStart == v2p || ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6280:28 ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c: note: use '==' to turn this assignment into an equality comparison :6296:55: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( delta = pEdgePlus->flow ) { ^ == vPathEnd == v2p && vPathStart == v1p) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6296:55: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2p && vPathStart == v1p) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6295:55: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1p && vPathStart == v2p || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6295:55: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1p && vPathStart == v2p || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6296:55: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2p && vPathStart == v1p) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6296:55: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2p && vPathStart == v1p) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6334:55: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1m && vPathStart == v2m || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6334:55: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1m && vPathStart == v2m || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6335:55: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2m && vPathStart == v1m) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6335:55: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2m && vPathStart == v1m) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6334:55: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1m && vPathStart == v2m || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6334:55: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1m && vPathStart == v2m || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6335:55: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2m && vPathStart == v1m) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr2.c:6335:55: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2m && vPathStart == v1m) && ^ ( ) [ 14%] Built target RDInchiLib_static [ 14%] Built target RDGeneral 131 warnings generated. [ 14%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichirvr3.c.o 131 warnings generated. [ 14%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichirvr3.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:250:34/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: :250:34: warning: warningusing the result of an assignment as a condition without parentheses [-Wparentheses] : using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( pAtomIndList, IndList.pnEdges[j+2], INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( pAtomIndList, IndList.pnEdges[j+2], INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:250:34: note: place parentheses around the assignment to silence this warning 250:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( pAtomIndList, IndList.pnEdges[j+2], INC_ADD_EDGE )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:250:34: note if ( ret = AddToEdgeList( pAtomIndList, IndList.pnEdges[j+2], INC_ADD_EDGE )) { ^ : use '==' to turn this assignment into an equality comparison ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:250:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( pAtomIndList, IndList.pnEdges[j+2], INC_ADD_EDGE )) { ^ == if ( ret = AddToEdgeList( pAtomIndList, IndList.pnEdges[j+2], INC_ADD_EDGE )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:328:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:328:22: warning: if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { using the result of an assignment as a condition without parentheses [-Wparentheses] ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:328:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:328:22 if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^: note: place parentheses around the assignment to silence this warning ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:328:22: if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) {note : ^use '==' to turn this assignment into an equality comparison ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:328:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:341:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:341:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:341:30: note: if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) {place parentheses around the assignment to silence this warning ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:341:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ^ ( ) if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:341/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:30: note:341:30: note: use '==' to turn this assignment into an equality comparison: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ^ == :344:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:344:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :344:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:344:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:344:30: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:344:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:348:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:348:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:34830::30 note: place parentheses around the assignment to silence this warning : warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:348:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:348:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:348:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:362:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &SFlowerEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:362:30: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:362:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &SFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:362:30: if ( ret = AddToEdgeList( &SFlowerEdges, j, INC_ADD_EDGE ) ) { note ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ : /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:use '==' to turn this assignment into an equality comparison 362:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &SFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &SFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:362:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &SFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:372:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllBondEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:372:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:372:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllBondEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &AllBondEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :372/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::26: note372:26: note: : place parentheses around the assignment to silence this warninguse '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllBondEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &AllBondEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:372:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllBondEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:394:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:394:14: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {:394:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :394:14/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:: 394note: use '==' to turn this assignment into an equality comparison :14: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:394:14: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:398:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:398:14:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:398:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:398:14: note ( ) : place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:398:14: if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {note: use '==' to turn this assignment into an equality comparison ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {398 : ^14 : == note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:408:33: warning: '&&' within '||' [-Wlogical-op-parentheses] !pc2i->nNumTgDiffMinus && !pc2i->nNumTgDiffH ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:408:33: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:408:33: note: place parentheses around the '&&' expression to silence this warning !pc2i->nNumTgDiffMinus && !pc2i->nNumTgDiffH ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ !pc2i->nNumTgDiffMinus && !pc2i->nNumTgDiffH ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:408:33: note: place parentheses around the '&&' expression to silence this warning !pc2i->nNumTgDiffMinus && !pc2i->nNumTgDiffH ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:438:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: 438 ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 30:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:438:30 warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) :438:30: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: place parentheses around the assignment to silence this warning :438:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:438:30 if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: ^ == note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:450:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:450:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:450:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:450:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:450:30 if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: ^note : ( )use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:450:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:456:22/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:456:22: warning: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:456:22:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c note: place parentheses around the assignment to silence this warning :456:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:456:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:456:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ^ == if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::478478::50: warning: '&&' within '||' [-Wlogical-op-parentheses] 50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:478:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:478:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:479:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:479:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:479:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:479:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:506:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:506:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:506:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:506:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:506:22: note if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {: place parentheses around the assignment to silence this warning ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:506:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:512:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:512:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:512:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:512:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:512:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:512:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:541:49: warning: '&&' within '||' [-Wlogical-op-parentheses] (pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:541:49: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:541:49: warning: '&&' within '||' [-Wlogical-op-parentheses] (pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1 || ^ ( ) (pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:541:49: note: place parentheses around the '&&' expression to silence this warning (pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:551:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:551:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:551:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: 551 ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:551:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:551:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:563:54: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber > 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:563:54: note: place parentheses around the '&&' expression to silence this warning pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber > 1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:563:54: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber > 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:563:54: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:571:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber > 1) && ^ if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:571:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:571:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:576:22: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:571:26: warning: : using the result of an assignment as a condition without parentheses [-Wparentheses] using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_DB_O_Plus, num_SB_NH ) ) { if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:576:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:571:26: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_DB_O_Plus, num_SB_NH ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:576:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) if ( num_try = inchi_min( num_DB_O_Plus, num_SB_NH ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c : ^571 : == 26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:576:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_DB_O_Plus, num_SB_NH ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:576:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_DB_O_Plus, num_SB_NH ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:576:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_DB_O_Plus, num_SB_NH ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:599:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:599:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:600:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:600:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:599:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:599:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:600:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:600:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:634:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:634:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:634:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:640:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:634:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:634 if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :22: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cplace parentheses around the assignment to silence this warning: 640:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:634:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {: 640 ^: ==22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:640:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:640:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:640:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:686:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:686:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:686:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:686:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:686:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:686:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:708:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:708:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:708:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:708:26: ^ == warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::713:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]708:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ^ ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:713:22: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cplace parentheses around the assignment to silence this warning :708:26: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:713:22: note: if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {use '==' to turn this assignment into an equality comparison ^ == if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:713:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:713:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:713:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:735:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:735:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:736:50: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) {: 735 ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~: 50: warning: '&&' within '||' [-Wlogical-op-parentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:736:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:735:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:736:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:736:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:763:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:763:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:763:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::769763::2222:: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:763:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:763:22: note: use '==' to turn this assignment into an equality comparison/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:769 :22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:769/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::769:22:22: note: warninguse '==' to turn this assignment into an equality comparison: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:769:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:769:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:821:69: warning: '&&' within '||' [-Wlogical-op-parentheses] pnMobHInChI && pnMobHInChI[i] == 1 && pnFixHInChI && pnFixHInChI[i] == -1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:821:69: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:821:69: warning: '&&' within '||' [-Wlogical-op-parentheses] pnMobHInChI && pnMobHInChI[i] == 1 && pnFixHInChI && pnFixHInChI[i] == -1 ) && ^ ( ) pnMobHInChI && pnMobHInChI[i] == 1 && pnFixHInChI && pnFixHInChI[i] == -1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:821:69: note: place parentheses around the '&&' expression to silence this warning pnMobHInChI && pnMobHInChI[i] == 1 && pnFixHInChI && pnFixHInChI[i] == -1 ) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:825:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:825:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:825:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:825:26: note : ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:825:use '==' to turn this assignment into an equality comparison 26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:825:26: note: use '==' to turn this assignment into an equality comparison ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:830:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:830:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:830:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:830:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ^ ( ) if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::830:22: note: use '==' to turn this assignment into an equality comparison830:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ^ == if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:853:50: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:853: if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ 50/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::853:50: note: place parentheses around the '&&' expression to silence this warning warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:854:50: warning: '&&' within '||' [-Wlogical-op-parentheses]853:50: note : place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:854:50: note: place parentheses around the '&&' expression to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :854:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:854:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:881:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:881:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:881:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:881:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:881:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:881:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:887:22: warning: if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {using the result of an assignment as a condition without parentheses [-Wparentheses] ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:887:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {: 887 ^: 22 ( ): warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:887:22:using the result of an assignment as a condition without parentheses [-Wparentheses] note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:887:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:887:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:920:54: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:920:54: note: place parentheses around the '&&' expression to silence this warning pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:920:54: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:920:54: note: place parentheses around the '&&' expression to silence this warning pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:930:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:930:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:930:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:930:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:930:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:930:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:950:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:950:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c950::95026::26 warning: : note: use '==' to turn this assignment into an equality comparison using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ==/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:950:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:950::955:2622:: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:955:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:955/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::95522: note:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:955:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:955:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:977:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:977:50: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:977:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:978:50: warning: if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 ||'&&' within '||' [-Wlogical-op-parentheses] ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:977:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:978:50 if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) : note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:978:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:978:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1005:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1005:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1005:22: if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1005:22: using the result of an assignment as a condition without parentheses [-Wparentheses] note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1005:22 if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {: note: place parentheses around the assignment to silence this warning ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1005:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1011:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :1011 ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1011:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1011:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1011:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1011:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1035:49: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1035:49: (pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1 ||warning: '&&' within '||' [-Wlogical-op-parentheses] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1035:49: note: place parentheses around the '&&' expression to silence this warning (pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1035:49: note (pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1 || : ^place parentheses around the '&&' expression to silence this warning ( ) (pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1046:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: 1046 ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1046:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1046:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1046:26: note if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) : use '==' to turn this assignment into an equality comparison/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :1046:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1062:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1062:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1062:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1062: if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) 26: note: place parentheses around the assignment to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :1062:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: 1062 ^: 26 ==: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c ^: 1067 ==: 22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( num_try = inchi_min( num_DB_O, num_SB_NH ) ) {: 1067:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1067:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_DB_O, num_SB_NH ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1067:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_DB_O, num_SB_NH ) ) { ^ ( ) if ( num_try = inchi_min( num_DB_O, num_SB_NH ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1067:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1067:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_DB_O, num_SB_NH ) ) { ^ == if ( num_try = inchi_min( num_DB_O, num_SB_NH ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1089:50: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1089:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || :1089:50: note: place parentheses around the '&&' expression to silence this warning ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1089:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1090: ( ) 50: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1090:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1090:50: note : place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1090:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1117:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1117:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1117:22: note ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1117:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1117:22 : /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cnote:: 1117:22: note: use '==' to turn this assignment into an equality comparisonuse '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1123:22:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1123:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {: 1123 ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c22::1123:22 : notenote: : place parentheses around the assignment to silence this warningplace parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c1123::22:1123:22: note note: use '==' to turn this assignment into an equality comparison : use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ^ == == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1164:49: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1164:49: warning: '&&' within '||' [-Wlogical-op-parentheses] pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) &&: 1164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 49/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:: 1164note:: 49place parentheses around the '&&' expression to silence this warning : note: place parentheses around the '&&' expression to silence this warning pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ^ ( ) pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1173:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1173:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1173:30: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1173:30: note: place parentheses around the assignment to silence this warning : place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1173:30: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1173:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1204:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1204:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1204:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1204:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1204:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1204:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ == if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1225:50: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1225:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1225:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1225:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1226:50: if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || warning: '&&' within '||' [-Wlogical-op-parentheses] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1226:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1226:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1226:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1257:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1257:22: warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {: using the result of an assignment as a condition without parentheses [-Wparentheses] ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1257:22: note if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {: place parentheses around the assignment to silence this warning ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1257:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {: 1257 ^: ( ) 22/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:: 1257note:: 22use '==' to turn this assignment into an equality comparison : note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::12631263::22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1263:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1263:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1263:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: == 1263:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1307:45: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pc2i->c2at[i].nFixHInChI && pc2i->c2at[i].nMobHInChI == pc2i->c2at[i].nFixHRevrs || ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1307:45: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1307:45: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pc2i->c2at[i].nFixHInChI && pc2i->c2at[i].nMobHInChI == pc2i->c2at[i].nFixHRevrs || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1308:71: warning: '&&' within '||' [-Wlogical-op-parentheses] (!pc2i->c2at[i].nFixHInChI && pc2i->c2at[i].nMobHInChI == pc2i->c2at[i].nFixHRevrs || ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1307:45: note: place parentheses around the '&&' expression to silence this warning pc2i->c2at[i].nFixHInChI == pc2i->c2at[i].nFixHRevrs && pc2i->c2at[i].endptInChI )) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1308:71: note: place parentheses around the '&&' expression to silence this warning (!pc2i->c2at[i].nFixHInChI && pc2i->c2at[i].nMobHInChI == pc2i->c2at[i].nFixHRevrs || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: pc2i->c2at[i].nFixHInChI == pc2i->c2at[i].nFixHRevrs && pc2i->c2at[i].endptInChI )) && ^ ( ) 1308:71: warning: '&&' within '||' [-Wlogical-op-parentheses] pc2i->c2at[i].nFixHInChI == pc2i->c2at[i].nFixHRevrs && pc2i->c2at[i].endptInChI )) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1308:71: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1311:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] pc2i->c2at[i].nFixHInChI == pc2i->c2at[i].nFixHRevrs && pc2i->c2at[i].endptInChI )) && ^ ( ) if (ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1311:25: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1311:25: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE )) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1311:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] == if (ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1311:25: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1311:25: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1321:45: warning if (ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE )) {: '&&' within '||' [-Wlogical-op-parentheses] ^ == (!pc2i->c2at[i].nFixHRevrs && pc2i->c2at[i].nMobHRevrs == pc2i->c2at[i].nFixHInChI || ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1321:45: note: place parentheses around the '&&' expression to silence this warning (!pc2i->c2at[i].nFixHRevrs && pc2i->c2at[i].nMobHRevrs == pc2i->c2at[i].nFixHInChI || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1322:71: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1321:45: warning: '&&' within '||' [-Wlogical-op-parentheses] pc2i->c2at[i].nFixHRevrs == pc2i->c2at[i].nFixHInChI && pc2i->c2at[i].endptRevrs )) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1322:71: note: place parentheses around the '&&' expression to silence this warning (!pc2i->c2at[i].nFixHRevrs && pc2i->c2at[i].nMobHRevrs == pc2i->c2at[i].nFixHInChI || ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1321:45: note: place parentheses around the '&&' expression to silence this warning pc2i->c2at[i].nFixHRevrs == pc2i->c2at[i].nFixHInChI && pc2i->c2at[i].endptRevrs )) && ^ ( ) (!pc2i->c2at[i].nFixHRevrs && pc2i->c2at[i].nMobHRevrs == pc2i->c2at[i].nFixHInChI || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1322:71: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1326:25: pc2i->c2at[i].nFixHRevrs == pc2i->c2at[i].nFixHInChI && pc2i->c2at[i].endptRevrs )) &&warning ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1322:71: using the result of an assignment as a condition without parentheses [-Wparentheses] : note: place parentheses around the '&&' expression to silence this warning if (ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1326:25: note: place parentheses around the assignment to silence this warning pc2i->c2at[i].nFixHRevrs == pc2i->c2at[i].nFixHInChI && pc2i->c2at[i].endptRevrs )) && ^ ( ) if (ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1326:25: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1326:25/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:: 1331warning:: 22using the result of an assignment as a condition without parentheses [-Wparentheses]: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1326:25: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1331:22: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE )) { ^ ( ) if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :1326:25:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1331:22: note: use '==' to turn this assignment into an equality comparisonnote : use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { if (ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE )) { ^ ^ == == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1331:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1331:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1331:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1360:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1360:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1361:54: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1360:54 vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ :/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :warning1361: '&&' within '||' [-Wlogical-op-parentheses] :54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1360:54: note vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ): place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1361:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1361:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1392:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1392:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1392:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1392:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1392:22: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cplace parentheses around the assignment to silence this warning :1398:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1392:22: if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ note: use '==' to turn this assignment into an equality comparison/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :1398:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ^ ( ) == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1398:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1398:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1398:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1398:22: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cuse '==' to turn this assignment into an equality comparison: 1422:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1422:49: note: place parentheses around the '&&' expression to silence this warning pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1422:49: warning: '&&' within '||' [-Wlogical-op-parentheses] pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1422:49: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1433:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ^ ( ) if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1433:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1433:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1433:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1445:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1433:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1445:30: note if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) : place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1433:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1445:30: note if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: use '==' to turn this assignment into an equality comparison ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1451:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_NHm_Neutr, num_DB_NHn_Plus ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1451:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1445:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_NHm_Neutr, num_DB_NHn_Plus ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1451:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1445:30: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_NHm_Neutr, num_DB_NHn_Plus ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1445:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1451:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_NHm_Neutr, num_DB_NHn_Plus ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1451:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_NHm_Neutr, num_DB_NHn_Plus ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1451:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_NHm_Neutr, num_DB_NHn_Plus ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1473:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1473:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1474:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1474:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1473:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1473:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1474:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1501:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :1474:50: note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1501:22: note: place parentheses around the assignment to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1501:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1507:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1507:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {: 1501 ^: 22 ( ): warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1507:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1501: if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == 22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1516:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c49::1501 warning: '&&' within '||' [-Wlogical-op-parentheses] :22: note: use '==' to turn this assignment into an equality comparison if ( (pc2i->nNumTgInChI > pc2i->nNumTgRevrs && pc2i->nNumTgRevrs == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1516:49 if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {: note: place parentheses around the '&&' expression to silence this warning ^ == if ( (pc2i->nNumTgInChI > pc2i->nNumTgRevrs && pc2i->nNumTgRevrs == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1507:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1507:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1507:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1516:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (pc2i->nNumTgInChI > pc2i->nNumTgRevrs && pc2i->nNumTgRevrs == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1516:49: note: place parentheses around the '&&' expression to silence this warning if ( (pc2i->nNumTgInChI > pc2i->nNumTgRevrs && pc2i->nNumTgRevrs == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1565:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1565:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1565:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1565:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1565:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1586:50: warning: '&&' within '||' [-Wlogical-op-parentheses]:1565:22: note: use '==' to turn this assignment into an equality comparison if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c : ^1586 == :50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1587:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1587:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1586:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1586:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1587:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1587:50: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1615:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] place parentheses around the '&&' expression to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) {: 1615 ^: 22 ( ): note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1615:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1621:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1621:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {: 1615 ^: 22 ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 1621:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1615:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1629:49: warning:1615:22: note: : '&&' within '||' [-Wlogical-op-parentheses] use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( (pc2i->nNumTgInChI > pc2i->nNumTgRevrs && pc2i->nNumTgRevrs == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1629:49: note: place parentheses around the '&&' expression to silence this warning if ( (pc2i->nNumTgInChI > pc2i->nNumTgRevrs && pc2i->nNumTgRevrs == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1621:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1621:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1621:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1629:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (pc2i->nNumTgInChI > pc2i->nNumTgRevrs && pc2i->nNumTgRevrs == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1629:49: note: place parentheses around the '&&' expression to silence this warning if ( (pc2i->nNumTgInChI > pc2i->nNumTgRevrs && pc2i->nNumTgRevrs == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1680:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1680:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1680:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1680:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1680:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1680:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( CurrEdges.num_edges, CurChargeEdges.num_edges ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1709:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1709:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1710:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1710:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1709:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1709:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1710:54: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1741:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1710:54: if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {note : place parentheses around the '&&' expression to silence this warning ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1741:22: note: place parentheses around the assignment to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1741:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1747:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1747:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1741:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1747:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1741:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1741:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1747:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1747:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1747:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1832:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1832:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1832:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1832:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1832:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1832:30: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1846:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurChargeEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1846:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1846:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1846:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1846:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1846:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1905:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1905:59: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1906:59: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1906:59: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2n && vPathStart == v1n) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1905:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1905:59: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1906/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1923:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1923:34: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cplace parentheses around the assignment to silence this warning :1906:59: note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c vPathEnd == v2n && vPathStart == v1n) &&: 1923 ^ : ( )34 : note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1923:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1942:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1923: if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {34 : note: place parentheses around the assignment to silence this warning ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1942 /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:22: note: :1923:34: note: use '==' to turn this assignment into an equality comparison place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1942:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1948:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1942:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1942:22: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cplace parentheses around the assignment to silence this warning :1948:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1942:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1948:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1948:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1948:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1948:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1990:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1990:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1990:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1990:26: warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1990:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:1990:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2010:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2010:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2010:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2015:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2015:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2010: if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) {26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2015:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2010:26: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2010:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2015:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2015:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2015:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2037:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2037:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2038:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2038:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2037:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2037:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2038:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2038:50: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2065:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2065:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2065:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2071:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2071:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2065:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2071:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2065:22: if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2065:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2071:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2071:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2071:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2109:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2109:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2109:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2109:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2109:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2109:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2132:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2132:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2132:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2137:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2137:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2137:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2132:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2132:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2132:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2137:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2137:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2137:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2159:50: if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O_Neutr ) ) { warning ^: '&&' within '||' [-Wlogical-op-parentheses] == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2159:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2160:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2160:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2159:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2159:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2160:50: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2187:22: warning: vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) {using the result of an assignment as a condition without parentheses [-Wparentheses] ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2160:50: note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2187:22: note: place parentheses around the assignment to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2187:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2193:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2193:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2187:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2193:22 if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ : /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2187:22:note: use '==' to turn this assignment into an equality comparison note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { == ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2187:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2193:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2193:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2193:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2234:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2234:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2234:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2253:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {:2234:26: warning: ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2253:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2234:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2253:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2234:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2258:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_DB_N_Neutr, num_SB_O_Minus ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2258:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_DB_N_Neutr, num_SB_O_Minus ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2258:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_DB_N_Neutr, num_SB_O_Minus ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2253:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2253:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2253:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2258:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2284:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_try = inchi_min( num_DB_N_Neutr, num_SB_O_Minus ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2258:22: note: place parentheses around the assignment to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2284:50: note: if ( num_try = inchi_min( num_DB_N_Neutr, num_SB_O_Minus ) ) {place parentheses around the '&&' expression to silence this warning ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2258:22: note: use '==' to turn this assignment into an equality comparison if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2285:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_try = inchi_min( num_DB_N_Neutr, num_SB_O_Minus ) ) { ^ == vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2285:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2314:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2314:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2314:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2284:50: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2320: if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ 22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2284:50: note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2320:22: note: place parentheses around the assignment to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2285:50: ^ ( ) warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:: 2320'&&' within '||' [-Wlogical-op-parentheses]: 22: note: use '==' to turn this assignment into an equality comparison vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c ^: 2285 ==: 50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2314:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2314:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2314:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2390:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::2390:34: note: place parentheses around the assignment to silence this warning 2320:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2390:34: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2320:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2393:34: warning: ( ) using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2320:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2393 if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == :34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2393:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2415:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2415:58: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2416:58: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2416:58: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2446:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2390:34: warning: if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2446:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2390:34: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2446:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ^ ( ) == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2390:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ==/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :2452:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2393: if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2452:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2393:34: note if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {: place parentheses around the assignment to silence this warning ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2452:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ^ ( ) if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2393:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2477:49: warning: '&&' within '||' [-Wlogical-op-parentheses] pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2477:49: note: place parentheses around the '&&' expression to silence this warning pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2415:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2415:58: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2416:58: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2416:58: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2446:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2446:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2446:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2452:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2452:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2452:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2477:49: warning: '&&' within '||' [-Wlogical-op-parentheses] pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2477:49: note: place parentheses around the '&&' expression to silence this warning pc2i->c2at[i].nValElectr == 5 && pc2i->c2at[i].nPeriodNum == 1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2530:50: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2530:50: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2530:50: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2530:50: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2530:50: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2549:74: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2530: if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ 50: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2549:74: note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CurrEdges, eCPlusC, INC_ADD_EDGE ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2550:74: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2550:74: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2549:74: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2549:74: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2550:74: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2593:22: warning: :2550:74: note: place parentheses around the '&&' expression to silence this warning using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2593:22: note: place parentheses around the assignment to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == -1 ) { ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2593:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2599:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2599:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2599:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2593:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2593:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2593:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2633:54: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c (pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1 || : ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~2599:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2633:54: note: place parentheses around the '&&' expression to silence this warning (pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1 || ^ ( ) if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2599:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2599:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2663:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2663:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2663:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2668:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2668:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2668:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2633:54: warning: '&&' within '||' [-Wlogical-op-parentheses] (pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2633:54: note: place parentheses around the '&&' expression to silence this warning (pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2663:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2714:51: if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { warning: '&&' within '||' [-Wlogical-op-parentheses] ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2663:26: note if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2714:51: note: place parentheses around the assignment to silence this warning : place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ^ ( ) ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2663:26:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :note2715: :use '==' to turn this assignment into an equality comparison51 : warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::27152668:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :51: note: place parentheses around the '&&' expression to silence this warning if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vPathEnd == v2n && vPathStart == v1n) &&/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c : ^2668 ( ):22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2668:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2775:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2775:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2775:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2781:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2781:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2781:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2714:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2714:51: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2715:51: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2715:51: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2n && vPathStart == v1n) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2821:53: warning: '&&' within '||' [-Wlogical-op-parentheses] pc2i->c2at[i].nValElectr == 5 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2821:53: note: place parentheses around the '&&' expression to silence this warning pc2i->c2at[i].nValElectr == 5 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2775:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2775:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2775:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2781:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2781:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2781:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2872:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2872:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2872:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2875:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2875:34: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2821:53: if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ^warning: '&&' within '||' [-Wlogical-op-parentheses] ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2875: pc2i->c2at[i].nValElectr == 5 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ 34: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: :use '==' to turn this assignment into an equality comparison2821 :53: note: place parentheses around the '&&' expression to silence this warning pc2i->c2at[i].nValElectr == 5 && ^ if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2881:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2881:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2881:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2887:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2887:38: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2887:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2894:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2894:26: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2894:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ^ == :2872:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2872:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2872:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2875:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2875:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2875:34: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2920:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2920:54: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2881:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2921:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2881:34: note: place parentheses around the assignment to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2921:54: note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2881:34: note: use '==' to turn this assignment into an equality comparison vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ^ ( ) if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2887:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2887:38: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2887:38/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2947:26: warning: note: use '==' to turn this assignment into an equality comparison: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CurrEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2947:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2894:26/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2947:: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) {26: note: use '==' to turn this assignment into an equality comparison ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2894:26: note: place parentheses around the assignment to silence this warning ^ == if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2894:26: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2953:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2953:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2953:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2920:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2920:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2921:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2921:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2947:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2947:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2947:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2953:26: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3048:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3048:34: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: :2953:26: note: place parentheses around the assignment to silence this warning place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:2953:26 if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3048:34: note: use '==' to turn this assignment into an equality comparison : note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3053:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3053:30: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3053:30: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3079:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3079:58: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3080:58: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3080:58: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3106:30/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3048:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3048:34: note: if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {place parentheses around the assignment to silence this warning ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3106:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {3048 : ^34 : ( ) note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3106:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3053:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3112:30: if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3053:30: note: place parentheses around the assignment to silence this warning warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3053:30: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3112 if ( num_try = inchi_min( num_SB_N_Neutr, num_DB_O ) ) {: 30 ^: note : place parentheses around the assignment to silence this warning == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3112:30: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3129:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (pc2i->nNumTgInChI <= 1 && ~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3129:34: note: place parentheses around the '&&' expression to silence this warning if ( (pc2i->nNumTgInChI <= 1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3079:58: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3079:58: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3080:58: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3080:58: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3106:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3106:30: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3106:30: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3112:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3112:30: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {3196:26: warning ^ ( ) : using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3112:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &iat_N_III_List, iat, 32 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3196:26: note if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == : place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &iat_N_III_List, iat, 32 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3196:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3129:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &iat_N_III_List, iat, 32 ) ) { if ( (pc2i->nNumTgInChI <= 1 && ^ == ~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3129:34: note: place parentheses around the '&&' expression to silence this warning if ( (pc2i->nNumTgInChI <= 1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3204:54: warning: '&&' within '||' [-Wlogical-op-parentheses] (pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3204:54: note: place parentheses around the '&&' expression to silence this warning (pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3212:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &iat_X_List, iat, 32 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3212:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &iat_X_List, iat, 32 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3212:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &iat_X_List, iat, 32 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3196:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &iat_N_III_List, iat, 32 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3196:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &iat_N_III_List, iat, 32 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3196:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &iat_N_III_List, iat, 32 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3204:54: warning: '&&' within '||' [-Wlogical-op-parentheses] (pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3204:54: note: place parentheses around the '&&' expression to silence this warning (pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3212:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &iat_X_List, iat, 32 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3212:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &iat_X_List, iat, 32 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3212:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &iat_X_List, iat, 32 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3306:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3306:59: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3307:59: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3307:59: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2n && vPathStart == v1n) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3337:63: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3337:63: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3338:63: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3338:63: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2n && vPathStart == v1n) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3306:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3306:59: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3395:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3307:59: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3395:22: note: place parentheses around the assignment to silence this warning vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3307:59: note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3395:22: note: use '==' to turn this assignment into an equality comparison vPathEnd == v2n && vPathStart == v1n) && ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3401:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3401:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3401:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3337:63: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3414:33: warning: if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n ||'&&' within '||' [-Wlogical-op-parentheses] ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3337:63: note: place parentheses around the '&&' expression to silence this warning pc2i->nNumTgInChI <= 1 && pc2i->nNumTgRevrs > pc2i->nNumTgInChI ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3414:33: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3338:63: warning: '&&' within '||' [-Wlogical-op-parentheses] pc2i->nNumTgInChI <= 1 && pc2i->nNumTgRevrs > pc2i->nNumTgInChI ) { ^ ( ) vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3338:63: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2n && vPathStart == v1n) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3395:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3395:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3467:26: if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cwarning:3395:22: using the result of an assignment as a condition without parentheses [-Wparentheses] : note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ==/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :3467:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3467:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3401:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3401:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3472:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3401:22 if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ : note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cuse '==' to turn this assignment into an equality comparison :3472:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3472:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3414:33: warning: '&&' within '||' [-Wlogical-op-parentheses] pc2i->nNumTgInChI <= 1 && pc2i->nNumTgRevrs > pc2i->nNumTgInChI ) { ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3414:33: note: place parentheses around the '&&' expression to silence this warning pc2i->nNumTgInChI <= 1 && pc2i->nNumTgRevrs > pc2i->nNumTgInChI ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3518:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3518:51: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3467:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3519:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3467:26: note: place parentheses around the assignment to silence this warning vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3519:51: note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3467:26: note: use '==' to turn this assignment into an equality comparison vPathEnd == v2n && vPathStart == v1n) && ^ ( ) if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3472:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3472:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3472:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3548:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3548:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3548:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3554:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3554:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3554:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3518:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3518:51: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3519:51: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3519:51: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2n && vPathStart == v1n) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3601:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3548:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3601:30: note: 22: warning: place parentheses around the assignment to silence this warningusing the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c : ( )3548 :22/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:: 3601note:: 30place parentheses around the assignment to silence this warning: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3548: ^ 22: note: use '==' to turn this assignment into an equality comparison == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3554:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3554:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3554:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3627:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O_Neutr ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3627:26: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O_Neutr ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3627:26: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O_Neutr ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3654:54: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3601:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3654:54/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3601:30: : note: place parentheses around the '&&' expression to silence this warning note: place parentheses around the assignment to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ^ ( ) ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3601/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::303655:: 54:note: use '==' to turn this assignment into an equality comparisonwarning : '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3655:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3627:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O_Neutr ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3627:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3686:26: if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O_Neutr ) ) { ^ ( ) warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cusing the result of an assignment as a condition without parentheses [-Wparentheses]: 3627:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3686: if ( num_try = inchi_min( num_SB_N_Minus, num_DB_O_Neutr ) ) { ^ == 26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3686:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3692:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3692:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3692:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3654:54: warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == : '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3654:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3655:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3655:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3722:54: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3722:54: note: place parentheses around the '&&' expression to silence this warning pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3686:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3686:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {: 3738 ^: 54 ( ): warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3686:26: note: use '==' to turn this assignment into an equality comparison pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber > 1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3738:54: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber > 1 ) && : ^ 3692 ( ) :26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3692:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3692:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3749:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3749:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3749:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3754:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3754:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3722:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3754:22: note: use '==' to turn this assignment into an equality comparison pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1) && if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3722:54: note: place parentheses around the '&&' expression to silence this warning pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber == 1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3738:54: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber > 1 ) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3738:54: note: place parentheses around the '&&' expression to silence this warning pVA[iat].cNumValenceElectrons == 5 && pVA[iat].cPeriodicRowNumber > 1 ) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3749:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3749:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3802:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~:3749:26: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3802:51: if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { note: place parentheses around the '&&' expression to silence this warning ^ == if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::37543803::2251:: warningwarning: : using the result of an assignment as a condition without parentheses [-Wparentheses]'&&' within '||' [-Wlogical-op-parentheses] if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::38033754::5122:: note: place parentheses around the assignment to silence this warning note: place parentheses around the '&&' expression to silence this warning if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3754:22: note vPathEnd == v2n && vPathStart == v1n) && : use '==' to turn this assignment into an equality comparison ^ ( ) if ( num_try = inchi_min( num_SB_Neutr, num_DB_Charged ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3832:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3832:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3832:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3838:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3838:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3838:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3802:51: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3802:51: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1n && vPathStart == v2n || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3803:51: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2n && vPathStart == v1n) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3803:51: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2n && vPathStart == v1n) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3832:22/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3884:59: warning: : warning: '&&' within '||' [-Wlogical-op-parentheses]using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 0 <= (e1=pVA[iat].nCPlusGroupEdge-1) && !pBNS->edge[e1].flow || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3832:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3884:59: note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3832:22 0 <= (e1=pVA[iat].nCPlusGroupEdge-1) && !pBNS->edge[e1].flow || ^ : note: ( )use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3838:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3889:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3838:22: note if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ : place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3889:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: 3838 ^: 22 ( ): note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3889:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3902:56: warning: '&&' within '||' [-Wlogical-op-parentheses] 0 <= (e1=pVA[iat].nCMinusGroupEdge-1) && !pBNS->edge[e1].flow || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3902:56: note: place parentheses around the '&&' expression to silence this warning 0 <= (e1=pVA[iat].nCMinusGroupEdge-1) && !pBNS->edge[e1].flow || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3884:59: warning: '&&' within '||' [-Wlogical-op-parentheses] 0 <= (e1=pVA[iat].nCPlusGroupEdge-1) && !pBNS->edge[e1].flow || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3884:59: note: place parentheses around the '&&' expression to silence this warning 0 <= (e1=pVA[iat].nCPlusGroupEdge-1) && !pBNS->edge[e1].flow || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3926:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3926:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3927:46: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3889:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {3927: ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 46: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3889:26: note: place parentheses around the assignment to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3889:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3902:56: warning: '&&' within '||' [-Wlogical-op-parentheses] 0 <= (e1=pVA[iat].nCMinusGroupEdge-1) && !pBNS->edge[e1].flow || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3902:56:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3957:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] note: place parentheses around the '&&' expression to silence this warning 0 <= (e1=pVA[iat].nCMinusGroupEdge-1) && !pBNS->edge[e1].flow || if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3957:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3957:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3963:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3963:22: note: place parentheses around the assignment to silence this warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3926:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::39263963::22: note: use '==' to turn this assignment into an equality comparison 46: note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3927:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3927:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3957:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3957:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4006:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3957:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, iat, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4006:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, iat, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c3963:4006:26: note: use '==' to turn this assignment into an equality comparison :22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, iat, INC_ADD_EDGE ) ) { ^ == if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3963:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:3963:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4056:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4056:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4057:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == DeltaChargeExpected ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4057/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4006:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses]: 50: note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CurrEdges, iat, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4006:26: vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == DeltaChargeExpected ) {note : ^place parentheses around the assignment to silence this warning ( ) if ( ret = AddToEdgeList( &CurrEdges, iat, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4006:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, iat, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4087:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4087:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4087:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4093:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4093:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {: 4056 ^: 50 ( ) : warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4093:26: note: use '==' to turn this assignment into an equality comparison if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {4056 : ^50 == : note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4057:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == DeltaChargeExpected ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4057:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == DeltaChargeExpected ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4142:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4087:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4142:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4087:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4142:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4087:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4093:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4093:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4093:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4180:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4180:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4180:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::41424186::2622:: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( num_try = inchi_min( num_SB_O_Minus, num_DB_N ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4142:26/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4186:22: note: place parentheses around the assignment to silence this warning : note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_O_Minus, num_DB_N ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4186:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) if ( num_try = inchi_min( num_SB_O_Minus, num_DB_N ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4142:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4207:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4207:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4208:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4208:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4180:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4180:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4180:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4234:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4186:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4234:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_O_Minus, num_DB_N ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4186:22: if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4234note: place parentheses around the assignment to silence this warning :22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_O_Minus, num_DB_N ) ) { ^ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4186:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_O_Minus, num_DB_N ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4240:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4240:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4240:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4207:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4207:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4208:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4208:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4288:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4288:26: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4234:22: place parentheses around the assignment to silence this warning warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ :4288:26: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4234:use '==' to turn this assignment into an equality comparison 22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4234:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4240:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4240:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4240:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4354:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4354:22: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) {: 4288 ^ ( ) :/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] 4354:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c : ^4288 : ==26 : note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4288:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4376:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4376:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4377:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4377:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4354:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4403:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4354:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4403:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ^ ( ) if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c : ^ ( ) 4354/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:22: note: use '==' to turn this assignment into an equality comparison :4403:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( num_SB_O_Minus, num_DB_O ) ) { ^ == if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4409:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4409:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4409:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4376:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4376:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4377:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4377:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4403:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4403:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4403:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4409:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4409:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4409:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4515:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &OtherSO, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4515:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &OtherSO, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4515:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &OtherSO, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4521:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &SOMinus, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4521:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &SOMinus, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4521:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &SOMinus, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4527:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CentralS, iS, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4527:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CentralS, iS, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4527:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CentralS, iS, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4534:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4534:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4534:30: note/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4515:42: warning: use '==' to turn this assignment into an equality comparison : using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ if ( ret = AddToEdgeList( &OtherSO, e, INC_ADD_EDGE ) ) { == ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4515:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &OtherSO, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4515:42: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4545:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &OtherSO, e, INC_ADD_EDGE ) ) { ^ == if ( num_try = inchi_min( SOMinus.num_edges, CurrEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4545:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( SOMinus.num_edges, CurrEdges.num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4545:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4521:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( SOMinus.num_edges, CurrEdges.num_edges ) ) { ^ == if ( ret = AddToEdgeList( &SOMinus, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4521:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &SOMinus, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4521:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &SOMinus, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4527:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CentralS, iS, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4527:30: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4566:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = AddToEdgeList( &CentralS, iS, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4527:30: note: use '==' to turn this assignment into an equality comparison if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4566:50: note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CentralS, iS, INC_ADD_EDGE ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4567:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4534:30: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4567:50warning: using the result of an assignment as a condition without parentheses [-Wparentheses] : note: place parentheses around the '&&' expression to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4534:30: note ^ ( ) : place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4534:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4545:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( SOMinus.num_edges, CurrEdges.num_edges ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4545:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( SOMinus.num_edges, CurrEdges.num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4545:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( SOMinus.num_edges, CurrEdges.num_edges ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4598:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4598:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4598:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4566:50: warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == : '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4566:50: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4604:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4567:50: if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4604:22: note: place parentheses around the assignment to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4567:50: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cnote:4604:22: note: place parentheses around the '&&' expression to silence this warning : use '==' to turn this assignment into an equality comparison vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4598:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4598:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4598:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4604:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4604:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4604:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4664:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4664:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4664:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4669:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_try = inchi_min( CurrEdges.num_edges, num_DB_O ) ) { ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4669:22: note: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, num_DB_O ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4669:22: note: use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( CurrEdges.num_edges, num_DB_O ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4664:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4664:26: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {: 4695 ^: 50 ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4664: warning: '&&' within '||' [-Wlogical-op-parentheses] :26: note: use '==' to turn this assignment into an equality comparison if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c : ^4695 : ==50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4696:50: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4669:22: warningwarning: '&&' within '||' [-Wlogical-op-parentheses] : using the result of an assignment as a condition without parentheses [-Wparentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { if ( num_try = inchi_min( CurrEdges.num_edges, num_DB_O ) ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4696/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4669:22: :50: note: place parentheses around the '&&' expression to silence this warningnote: place parentheses around the assignment to silence this warning if ( num_try = inchi_min( CurrEdges.num_edges, num_DB_O ) ) { ^ ( ) vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) {/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4669:22: ^note : ( )use '==' to turn this assignment into an equality comparison if ( num_try = inchi_min( CurrEdges.num_edges, num_DB_O ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4723:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4723:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4723:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4695:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4695:50: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4729:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) {: 4696 ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~: 50: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4729:22: note: place parentheses around the assignment to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :4696:50: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.cnote: place parentheses around the '&&' expression to silence this warning :4729:22: note: use '==' to turn this assignment into an equality comparison vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4723:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4723:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4723:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4729:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4729:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4729:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4851:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4851:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4851:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4851:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4851:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4851:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4993:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4993:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4994:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4994:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5031:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5031:22: note: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4993:54: warning: '&&' within '||' [-Wlogical-op-parentheses]place parentheses around the assignment to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4993:54/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c: :5031note: place parentheses around the '&&' expression to silence this warning :22: note: use '==' to turn this assignment into an equality comparison if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ^ == ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4994:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) &&/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5037:22: warning ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ : using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:4994:54: note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c vPathEnd == v2 && vPathStart == v1) && ^ ( ) :5037:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5037:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5031:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5031:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5031:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5037:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5037:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5037:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5240:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5240:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5241:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5241:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5276:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5240:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5276:22: note: place parentheses around the assignment to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5276:22/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5240:50: note:: note: use '==' to turn this assignment into an equality comparison place parentheses around the '&&' expression to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5241:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5282 :/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c22::5241 :warning50: using the result of an assignment as a condition without parentheses [-Wparentheses]: note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { vPathEnd == v2 && vPathStart == v1) && ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5282:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5282:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5276:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5276:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5276:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5282:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5352:63: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5282:22: note: place parentheses around the assignment to silence this warning bFirst = ( pVA[iat].cNumValenceElectrons == 5 && pc2i->nNumTgInChI == 1 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ~~ if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :5352:63: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5282:22: note: use '==' to turn this assignment into an equality comparison note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == bFirst = ( pVA[iat].cNumValenceElectrons == 5 && pc2i->nNumTgInChI == 1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5353:63: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[iat].cNumValenceElectrons == 6 && pc2i->nNumTgInChI != 1 ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5353:63: note: place parentheses around the '&&' expression to silence this warning pVA[iat].cNumValenceElectrons == 6 && pc2i->nNumTgInChI != 1 ); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5362:29: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_MISSED_TAUT_ALL], e, INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5362:29: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_MISSED_TAUT_ALL], e, INC_ADD_EDGE )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5362:29: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_MISSED_TAUT_ALL], e, INC_ADD_EDGE )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5352:63: warning: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5370:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] '&&' within '||' [-Wlogical-op-parentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_OTHER_TAUT_ALL], e, INC_ADD_EDGE )) { bFirst = ( pVA[iat].cNumValenceElectrons == 5 && pc2i->nNumTgInChI == 1 || ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5370:25: note: place parentheses around the assignment to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5352:63: note: place parentheses around the '&&' expression to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_OTHER_TAUT_ALL], e, INC_ADD_EDGE )) { ^ ( ) bFirst = ( pVA[iat].cNumValenceElectrons == 5 && pc2i->nNumTgInChI == 1 || ^ ( )/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c :5370:25: note: use '==' to turn this assignment into an equality comparison/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5353:63: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[iat].cNumValenceElectrons == 6 && pc2i->nNumTgInChI != 1 ); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_OTHER_TAUT_ALL], e, INC_ADD_EDGE )) { ^/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c : ==5353 :63: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5373:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] pVA[iat].cNumValenceElectrons == 6 && pc2i->nNumTgInChI != 1 ); ^ ( ) if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_AVOID], e, INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5373:25: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_AVOID], e, INC_ADD_EDGE )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5373:25: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5362:29: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_AVOID], e, INC_ADD_EDGE )) { ^ == if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_MISSED_TAUT_ALL], e, INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5362:29: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_MISSED_TAUT_ALL], e, INC_ADD_EDGE )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5362:29: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_MISSED_TAUT_ALL], e, INC_ADD_EDGE )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5370:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_OTHER_TAUT_ALL], e, INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5370:25: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_OTHER_TAUT_ALL], e, INC_ADD_EDGE )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5370:25: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_OTHER_TAUT_ALL], e, INC_ADD_EDGE )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5373:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_AVOID], e, INC_ADD_EDGE )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5373:25: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_AVOID], e, INC_ADD_EDGE )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5373:25: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_AVOID], e, INC_ADD_EDGE )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5461:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5461:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5462:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5462:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5497:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5497:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5497:22: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5461:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5461:50: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5503:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c::54625503::5022:: warningnote: : place parentheses around the assignment to silence this warning '&&' within '||' [-Wlogical-op-parentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5503:22: note: use '==' to turn this assignment into an equality comparison vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5462:50: note: place parentheses around the '&&' expression to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5497:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5497:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5497:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5503:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5503:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr3.c:5503:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2FHINCHI( pStruct, at2, pVA, pInChI, pc2i ) ) { ^ == In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/Dict.cpp:14: In file included from /sw/include/boost-1_53/boost/shared_array.hpp:17: In file included from /sw/include/boost-1_53/boost/smart_ptr/shared_array.hpp:28: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform2D.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform2D.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.cpp:11: 38In file included from : In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:/sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from 14/sw/include/boost-1_53/boost/format/alt_sstream.hpp: :In file included from 21: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.hIn file included from :/sw/include/boost-1_53/boost/shared_ptr.hpp17:: 17In file included from : /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:/sw/include/boost-1_53/boost/random.hpp491::5241: :In file included from warning: rvalue references are a C++11 extension [-Wc++11-extensions] /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Linking CXX static library libDataStructs_static.a [ 14%] Built target DataStructs_static [ 14%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichirvr4.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:80:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( pCarbonChargeEdges, MAX_NUM_CARBON_CHARGE_EDGES ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:80:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( pCarbonChargeEdges, MAX_NUM_CARBON_CHARGE_EDGES ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:80:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( pCarbonChargeEdges, MAX_NUM_CARBON_CHARGE_EDGES ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:102:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( pCarbonChargeEdges, k, 0 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:102:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( pCarbonChargeEdges, k, 0 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:102:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( pCarbonChargeEdges, k, 0 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:139:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( pNplus2BondsEdges, j, 128 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:139:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( pNplus2BondsEdges, j, 128 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:139:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( pNplus2BondsEdges, j, 128 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:176:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:176:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:176:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:181:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:181:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:181:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:187:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:187:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:187:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:269:71: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( iNV >= 0 && (j = pVA[iNV].nCPlusGroupEdge-1) > 0 && pBNS->edge[j].flow > 0 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:269:71: note: place parentheses around the '&&' expression to silence this warning if ( iNV >= 0 && (j = pVA[iNV].nCPlusGroupEdge-1) > 0 && pBNS->edge[j].flow > 0 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:270:71: warning: '&&' within '||' [-Wlogical-op-parentheses] iNH >= 0 && (j = pVA[iNH].nCPlusGroupEdge-1) > 0 && pBNS->edge[j].flow > 0 ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:270:71: note: place parentheses around the '&&' expression to silence this warning iNH >= 0 && (j = pVA[iNH].nCPlusGroupEdge-1) > 0 && pBNS->edge[j].flow > 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:285:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, ieFlower, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:285:38: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, ieFlower, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:285:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, ieFlower, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:300:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:300:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:301:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:301:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:356:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:356:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:356:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:362:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:362:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:362:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:368:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:368:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:368:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:384:23: warning: unsequenced modification and access to 'neigh' [-Wunsequenced] at2[neigh=at2[i].neighbor[0]].chem_bonds_valence > at2[neigh].valence ^ ~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:417:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:417:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:418:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:418:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:504:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:504:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:504:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:510:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:510:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:510:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:516:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:516:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:516:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:579:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:579:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:580:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:580:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:629:43: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pStruct->nCanon2Atno[i] && ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:629:43: note: place parentheses around the '&&' expression to silence this warning if ( !pStruct->nCanon2Atno[i] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:631:43: warning: '&&' within '||' [-Wlogical-op-parentheses] !pStruct->nAtno2Canon[i] && ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:631:43: note: place parentheses around the '&&' expression to silence this warning !pStruct->nAtno2Canon[i] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1452:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &WrongEdges, ne, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1452:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &WrongEdges, ne, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1452:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &WrongEdges, ne, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1512:109: warning: '&&' within '||' [-Wlogical-op-parentheses] int bPossiblyIgnore = pStruct->charge >= 0 && (!pTCGroups->num_tgroups || pStruct->iMobileH == TAUT_NON && pStruct->ti.num_t_groups); ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1512:109: note: place parentheses around the '&&' expression to silence this warning int bPossiblyIgnore = pStruct->charge >= 0 && (!pTCGroups->num_tgroups || pStruct->iMobileH == TAUT_NON && pStruct->ti.num_t_groups); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1531:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( &ChargeListAllExcept_DB_O, EDGE_LIST_CLEAR ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1531:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( &ChargeListAllExcept_DB_O, EDGE_LIST_CLEAR ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1531:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &ChargeListAllExcept_DB_O, EDGE_LIST_CLEAR ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1561:92: warning: '&&' within '||' [-Wlogical-op-parentheses] !(pVA[i].nTautGroupEdge || pStruct->iMobileH == TAUT_NON && pStruct->endpoint && pStruct->endpoint[i] ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1561:92: note: place parentheses around the '&&' expression to silence this warning !(pVA[i].nTautGroupEdge || pStruct->iMobileH == TAUT_NON && pStruct->endpoint && pStruct->endpoint[i] ) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1573:97: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (at2[neigh].endpoint || pStruct->iMobileH == TAUT_NON && pStruct->endpoint && pStruct->endpoint[neigh]) || at2[neigh].charge > 0 ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1573:97: note: place parentheses around the '&&' expression to silence this warning if ( (at2[neigh].endpoint || pStruct->iMobileH == TAUT_NON && pStruct->endpoint && pStruct->endpoint[neigh]) || at2[neigh].charge > 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1641:48: warning: '&&' within '||' [-Wlogical-op-parentheses] pStruct->endpoint && pStruct->endpoint[k] || ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1641:48: note: place parentheses around the '&&' expression to silence this warning pStruct->endpoint && pStruct->endpoint[k] || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1642:47: warning: '&&' within '||' [-Wlogical-op-parentheses] pStruct->fixed_H && pStruct->fixed_H[k] ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1642:47: note: place parentheses around the '&&' expression to silence this warning pStruct->fixed_H && pStruct->fixed_H[k] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1684:55: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1m && vPathStart == v2m || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1684:55: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1m && vPathStart == v2m || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1685:55: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2m && vPathStart == v1m) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1685:55: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2m && vPathStart == v1m) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1709:79: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !bPossiblyIgnore || !num_known_endpoints && !num_wrong_neigh && (num_acceptors_O + num_donors_O) >=3 ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1709:79: note: place parentheses around the '&&' expression to silence this warning if ( !bPossiblyIgnore || !num_known_endpoints && !num_wrong_neigh && (num_acceptors_O + num_donors_O) >=3 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1976:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, ie, num_edges ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1976:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, ie, num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1976:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, ie, num_edges ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2026:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2026:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2027:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge > 0*/ ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2027:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge > 0*/ ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2094:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2094:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2095:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge == 1*/ ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2095:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge == 1*/ ) { ^ ( ) 3 warnings generated. /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2232:15: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !at2 && !(at2 = (inp_ATOM *) inchi_malloc((num_at + num_deleted_H)*sizeof(at2[0]))) || ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2232:15: note: place parentheses around the '&&' expression to silence this warning if ( !at2 && !(at2 = (inp_ATOM *) inchi_malloc((num_at + num_deleted_H)*sizeof(at2[0]))) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2233:15: warning: '&&' within '||' [-Wlogical-op-parentheses] !at3 && !(at3 = (inp_ATOM *) inchi_malloc((num_at + num_deleted_H)*sizeof(at3[0])))) { ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2233:15: note: place parentheses around the '&&' expression to silence this warning !at3 && !(at3 = (inp_ATOM *) inchi_malloc((num_at + num_deleted_H)*sizeof(at3[0])))) { ^ ( ) Linking CXX static library libRDGeneral_static.a 246 warnings generated. [ 14%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichirvr4.c.o 246 warnings generated. [ 14%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib_static.dir/Transform3D.cpp.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:80:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( pCarbonChargeEdges, MAX_NUM_CARBON_CHARGE_EDGES ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:80:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( pCarbonChargeEdges, MAX_NUM_CARBON_CHARGE_EDGES ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:80:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( pCarbonChargeEdges, MAX_NUM_CARBON_CHARGE_EDGES ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:102:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( pCarbonChargeEdges, k, 0 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:102:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( pCarbonChargeEdges, k, 0 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:102:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( pCarbonChargeEdges, k, 0 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:139:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( pNplus2BondsEdges, j, 128 ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:139:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( pNplus2BondsEdges, j, 128 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:139:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( pNplus2BondsEdges, j, 128 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:176:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:176:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:176:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:181:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:181:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:181:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:187:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:187:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:187:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:269:71: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( iNV >= 0 && (j = pVA[iNV].nCPlusGroupEdge-1) > 0 && pBNS->edge[j].flow > 0 || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:269:71: note: place parentheses around the '&&' expression to silence this warning if ( iNV >= 0 && (j = pVA[iNV].nCPlusGroupEdge-1) > 0 && pBNS->edge[j].flow > 0 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:270:71: warning: '&&' within '||' [-Wlogical-op-parentheses] iNH >= 0 && (j = pVA[iNH].nCPlusGroupEdge-1) > 0 && pBNS->edge[j].flow > 0 ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:270:71: note: place parentheses around the '&&' expression to silence this warning iNH >= 0 && (j = pVA[iNH].nCPlusGroupEdge-1) > 0 && pBNS->edge[j].flow > 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:285:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, ieFlower, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:285:38: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, ieFlower, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:285:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, ieFlower, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:300:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:300:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:301:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:301:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:356:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:356:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:356:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:362:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:362:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:362:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:368:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:368:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:368:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:384:23: warning: unsequenced modification and access to 'neigh' [-Wunsequenced] at2[neigh=at2[i].neighbor[0]].chem_bonds_valence > at2[neigh].valence ^ ~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:417:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:417:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:418:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:418:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:504:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:504:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:504:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &NewlyFixedEdges, 2*num_at ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:510:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:510:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:510:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:516:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:516:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:516:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NewlyFixedEdges, j, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:579:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:579:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:580:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:580:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:629:43: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !pStruct->nCanon2Atno[i] && ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:629:43: note: place parentheses around the '&&' expression to silence this warning if ( !pStruct->nCanon2Atno[i] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:631:43: warning: '&&' within '||' [-Wlogical-op-parentheses] !pStruct->nAtno2Canon[i] && ~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:631:43: note: place parentheses around the '&&' expression to silence this warning !pStruct->nAtno2Canon[i] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1452:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &WrongEdges, ne, 0 )) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1452:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &WrongEdges, ne, 0 )) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1452:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &WrongEdges, ne, 0 )) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1512:109: warning: '&&' within '||' [-Wlogical-op-parentheses] int bPossiblyIgnore = pStruct->charge >= 0 && (!pTCGroups->num_tgroups || pStruct->iMobileH == TAUT_NON && pStruct->ti.num_t_groups); ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1512:109: note: place parentheses around the '&&' expression to silence this warning int bPossiblyIgnore = pStruct->charge >= 0 && (!pTCGroups->num_tgroups || pStruct->iMobileH == TAUT_NON && pStruct->ti.num_t_groups); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1531:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AllocEdgeList( &ChargeListAllExcept_DB_O, EDGE_LIST_CLEAR ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1531:14: note: place parentheses around the assignment to silence this warning if ( ret = AllocEdgeList( &ChargeListAllExcept_DB_O, EDGE_LIST_CLEAR ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1531:14: note: use '==' to turn this assignment into an equality comparison if ( ret = AllocEdgeList( &ChargeListAllExcept_DB_O, EDGE_LIST_CLEAR ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1561:92: warning: '&&' within '||' [-Wlogical-op-parentheses] !(pVA[i].nTautGroupEdge || pStruct->iMobileH == TAUT_NON && pStruct->endpoint && pStruct->endpoint[i] ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1561:92: note: place parentheses around the '&&' expression to silence this warning !(pVA[i].nTautGroupEdge || pStruct->iMobileH == TAUT_NON && pStruct->endpoint && pStruct->endpoint[i] ) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1573:97: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (at2[neigh].endpoint || pStruct->iMobileH == TAUT_NON && pStruct->endpoint && pStruct->endpoint[neigh]) || at2[neigh].charge > 0 ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1573:97: note: place parentheses around the '&&' expression to silence this warning if ( (at2[neigh].endpoint || pStruct->iMobileH == TAUT_NON && pStruct->endpoint && pStruct->endpoint[neigh]) || at2[neigh].charge > 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1641:48: warning: '&&' within '||' [-Wlogical-op-parentheses] pStruct->endpoint && pStruct->endpoint[k] || ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1641:48: note: place parentheses around the '&&' expression to silence this warning pStruct->endpoint && pStruct->endpoint[k] || ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1642:47: warning: '&&' within '||' [-Wlogical-op-parentheses] pStruct->fixed_H && pStruct->fixed_H[k] ) { ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1642:47: note: place parentheses around the '&&' expression to silence this warning pStruct->fixed_H && pStruct->fixed_H[k] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1684:55: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1m && vPathStart == v2m || ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1684:55: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1m && vPathStart == v2m || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1685:55: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2m && vPathStart == v1m) && ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1685:55: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2m && vPathStart == v1m) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1709:79: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !bPossiblyIgnore || !num_known_endpoints && !num_wrong_neigh && (num_acceptors_O + num_donors_O) >=3 ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1709:79: note: place parentheses around the '&&' expression to silence this warning if ( !bPossiblyIgnore || !num_known_endpoints && !num_wrong_neigh && (num_acceptors_O + num_donors_O) >=3 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1976:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, ie, num_edges ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1976:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, ie, num_edges ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:1976:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, ie, num_edges ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2026:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2026:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2027:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge > 0*/ ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2027:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge > 0*/ ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2094:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2094:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2095:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge == 1*/ ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2095:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) /*&& nDeltaCharge == 1*/ ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2232:15: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !at2 && !(at2 = (inp_ATOM *) inchi_malloc((num_at + num_deleted_H)*sizeof(at2[0]))) || ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2232:15: note: place parentheses around the '&&' expression to silence this warning if ( !at2 && !(at2 = (inp_ATOM *) inchi_malloc((num_at + num_deleted_H)*sizeof(at2[0]))) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2233:15: warning: '&&' within '||' [-Wlogical-op-parentheses] !at3 && !(at3 = (inp_ATOM *) inchi_malloc((num_at + num_deleted_H)*sizeof(at3[0])))) { ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr4.c:2233:15: note: place parentheses around the '&&' expression to silence this warning !at3 && !(at3 = (inp_ATOM *) inchi_malloc((num_at + num_deleted_H)*sizeof(at3[0])))) { ^ ( ) [ 14%] Built target RDGeneral_static Scanning dependencies of target Optimizer_static 41 warnings generated. [ 14%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichirvr5.c.o [ 15%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer_static.dir/BFGSOpt.cpp.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:93:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bCheckForbiddenPlus && NO_VERTEX == vPlusMinus1 || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:93:31: note: place parentheses around the '&&' expression to silence this warning if ( bCheckForbiddenPlus && NO_VERTEX == vPlusMinus1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:94:31: warning: '&&' within '||' [-Wlogical-op-parentheses] bCheckForbiddenMinus && NO_VERTEX == vPlusMinus2 ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:94:31: note: place parentheses around the '&&' expression to silence this warning bCheckForbiddenMinus && NO_VERTEX == vPlusMinus2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:182:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &TautEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:182:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &TautEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:182:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &TautEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:194:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:194:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:194:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:203:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:203:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:203:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:206:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:206:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:206:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:210:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:210:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:210:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:235:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:235:14: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:235:14: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:239:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:239:14: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:239:14: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:264:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:264:18: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:264:18: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:270:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:270:18: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:270:18: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:320:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:320:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:320:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:357:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:357:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:358:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:358:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:403:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:403:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:403:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:406:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:406:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:406:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:519:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, eTg, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:519:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, eTg, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:519:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, eTg, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:552:46: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges2, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:552:46: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges2, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:552:46: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges2, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:597:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:597:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:598:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:598:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:657:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:657:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:657:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:660:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:660:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:660:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:696:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:696:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:696:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:699:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:699:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:699:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:759:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:759:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:759:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:777:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges2, eTg, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:777:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges2, eTg, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:777:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges2, eTg, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:811:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:811:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:812:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:812:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:848:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:848:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:848:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:851:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:851:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:851:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:914:62: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:914:62: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:915:62: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:915:62: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:942:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:942:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:942:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:945:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:945:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:945:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1062:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1062:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1062:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1076:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_O], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1076:34: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_O], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1076:34: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_O], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1081:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_N], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1081:34: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_N], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1081:34: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_N], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1085:29: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_ALL], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1085:29: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_ALL], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1085:29: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_ALL], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1125:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1125:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1126:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1126:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1163:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1163:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1163:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1166:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1166:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1166:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == 41 warnings generated. [ 16%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichirvr5.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:93:31: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bCheckForbiddenPlus && NO_VERTEX == vPlusMinus1 || ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:93:31: note: place parentheses around the '&&' expression to silence this warning if ( bCheckForbiddenPlus && NO_VERTEX == vPlusMinus1 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:94:31: warning: '&&' within '||' [-Wlogical-op-parentheses] bCheckForbiddenMinus && NO_VERTEX == vPlusMinus2 ) { ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:94:31: note: place parentheses around the '&&' expression to silence this warning bCheckForbiddenMinus && NO_VERTEX == vPlusMinus2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:182:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &TautEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:182:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &TautEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:182:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &TautEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:194:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:194:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:194:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:203:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:203:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:203:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:206:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:206:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:206:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &NFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:210:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:210:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:210:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &OtherNFlowerEdges, j, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:235:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:235:14: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:235:14: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:239:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:239:14: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:239:14: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:264:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:264:18: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:264:18: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:270:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:270:18: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:270:18: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:320:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:320:30: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:320:30: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:357:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:357:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:358:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:358:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:403:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:403:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:403:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:406:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:406:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:406:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:519:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, eTg, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:519:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, eTg, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:519:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, eTg, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:552:46: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges2, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:552:46: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges2, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:552:46: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges2, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:597:50: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:597:50: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:598:50: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:598:50: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:657:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:657:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:657:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:660:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:660:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:660:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:696:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:696:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:696:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:699:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:699:26: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:699:26: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:759:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:759:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:759:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:777:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &CurrEdges2, eTg, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:777:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &CurrEdges2, eTg, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:777:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &CurrEdges2, eTg, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:811:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:811:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:812:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:812:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:848:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:848:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:848:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:851:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:851:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:851:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:914:62: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:914:62: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:915:62: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:915:62: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:942:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:942:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:942:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:945:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:945:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:945:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1062:26: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1062:26: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1062:26: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &ChangeableEdges[CHG_SET_O_FIXED], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1076:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_O], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1076:34: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_O], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1076:34: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_O], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1081:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_N], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1081:34: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_N], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1081:34: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_N], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1085:29: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_ALL], e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1085:29: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_ALL], e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1085:29: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &ChangeableEdges[CHG_SET_WRONG_TAUT_ALL], e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1125:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1125:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1126:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1126:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1163:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1163:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1163:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1166:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1166:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr5.c:1166:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutCMP2MHINCHI( pStruct, pTCGroups, at2, pVA, pInChI, pc2i ) ) { ^ == Scanning dependencies of target Alignment_static Scanning dependencies of target EigenSolvers_static [ 16%] [ 16%] Building CXX object Code/Numerics/Alignment/CMakeFiles/Alignment_static.dir/AlignPoints.cpp.o Building CXX object Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers_static.dir/PowerEigenSolver.cpp.o 42 warnings generated. [ 16%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichirvr6.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:303:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:303:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:303:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:388:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:388:18: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:388:18: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:444:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:444:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:444:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:554:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:554:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:554:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:560:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:560:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:560:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:565:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:565:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:565:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:571:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:571:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:571:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:579:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:579:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:579:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:617:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:617:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:618:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:618:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:650:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:650:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:650:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:746:33: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:746:33: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:746:33: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:752:44: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bMayBeUnfixed && pVA[j].cNumValenceElectrons == 6 || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:752:44: note: place parentheses around the '&&' expression to silence this warning if ( bMayBeUnfixed && pVA[j].cNumValenceElectrons == 6 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:753:63: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[j].cNumValenceElectrons == 5 && pVA[j].cPeriodicRowNumber > 1 ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:753:63: note: place parentheses around the '&&' expression to silence this warning pVA[j].cNumValenceElectrons == 5 && pVA[j].cPeriodicRowNumber > 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:755:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:755:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:755:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:762:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:762:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:762:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:766:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:766:38: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:766:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:774:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:774:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:774:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:813:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:813:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:814:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:814:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:846:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:846:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:846:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:944:22: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !i1 && !i2 || i1 && i2 ) { ~~~~^~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:944:22: note: place parentheses around the '&&' expression to silence this warning if ( !i1 && !i2 || i1 && i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:944:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !i1 && !i2 || i1 && i2 ) { ~~ ~~~^~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:944:36: note: place parentheses around the '&&' expression to silence this warning if ( !i1 && !i2 || i1 && i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:986:33: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:986:33: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:986:33: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:993:69: warning: '&&' within '||' [-Wlogical-op-parentheses] !(at2[j].endpoint || pStruct->endpoint && pStruct->endpoint[j]) ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:993:69: note: place parentheses around the '&&' expression to silence this warning !(at2[j].endpoint || pStruct->endpoint && pStruct->endpoint[j]) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:997:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:997:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:997:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1005:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1005:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1005:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1021:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1021:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1021:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1032:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == vPlusMinus && vPathStart == aC || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1032:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == vPlusMinus && vPathStart == aC || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1033:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == aC && vPathStart == vPlusMinus) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1033:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == aC && vPathStart == vPlusMinus) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1067:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1067:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1067:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1154:22: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !i1 && !i2 || i1 && i2 ) { ~~~~^~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1154:22: note: place parentheses around the '&&' expression to silence this warning if ( !i1 && !i2 || i1 && i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1154:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !i1 && !i2 || i1 && i2 ) { ~~ ~~~^~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1154:36: note: place parentheses around the '&&' expression to silence this warning if ( !i1 && !i2 || i1 && i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1183:33: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1183:33: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1183:33: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1190:69: warning: '&&' within '||' [-Wlogical-op-parentheses] !(at2[j].endpoint || pStruct->endpoint && pStruct->endpoint[j]) ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1190:69: note: place parentheses around the '&&' expression to silence this warning !(at2[j].endpoint || pStruct->endpoint && pStruct->endpoint[j]) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1194:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1194:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1194:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1202:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1202:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1202:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1230:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1230:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1231:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1231:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1255:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1255:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1255:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == [ 16%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer_static.dir/LinearSearch.cpp.o 42 warnings generated. [ 16%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichirvr6.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:303:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:303:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:303:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:388:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:388:18: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:388:18: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:444:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:444:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:444:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:554:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:554:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:554:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:560:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:560:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:560:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:565:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:565:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:565:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:571:34: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:571:34: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:571:34: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:579:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:579:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:579:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:617:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:617:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:618:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:618:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:650:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:650:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:650:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:746:33: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:746:33: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:746:33: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:752:44: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( bMayBeUnfixed && pVA[j].cNumValenceElectrons == 6 || ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:752:44: note: place parentheses around the '&&' expression to silence this warning if ( bMayBeUnfixed && pVA[j].cNumValenceElectrons == 6 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:753:63: warning: '&&' within '||' [-Wlogical-op-parentheses] pVA[j].cNumValenceElectrons == 5 && pVA[j].cPeriodicRowNumber > 1 ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:753:63: note: place parentheses around the '&&' expression to silence this warning pVA[j].cNumValenceElectrons == 5 && pVA[j].cPeriodicRowNumber > 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:755:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:755:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:755:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:762:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:762:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:762:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+1, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:766:38: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:766:38: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:766:38: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:774:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:774:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:774:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:813:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:813:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:814:54: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:814:54: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:846:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:846:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:846:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:944:22: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !i1 && !i2 || i1 && i2 ) { ~~~~^~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:944:22: note: place parentheses around the '&&' expression to silence this warning if ( !i1 && !i2 || i1 && i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:944:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !i1 && !i2 || i1 && i2 ) { ~~ ~~~^~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:944:36: note: place parentheses around the '&&' expression to silence this warning if ( !i1 && !i2 || i1 && i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:986:33: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:986:33: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:986:33: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:993:69: warning: '&&' within '||' [-Wlogical-op-parentheses] !(at2[j].endpoint || pStruct->endpoint && pStruct->endpoint[j]) ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:993:69: note: place parentheses around the '&&' expression to silence this warning !(at2[j].endpoint || pStruct->endpoint && pStruct->endpoint[j]) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:997:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:997:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:997:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1005:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1005:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1005:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1021:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1021:22: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1021:22: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, e, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1032:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == vPlusMinus && vPathStart == aC || ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1032:54: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == vPlusMinus && vPathStart == aC || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1033:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == aC && vPathStart == vPlusMinus) && nDeltaCharge == 1 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1033:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == aC && vPathStart == vPlusMinus) && nDeltaCharge == 1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1067:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1067:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1067:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1154:22: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !i1 && !i2 || i1 && i2 ) { ~~~~^~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1154:22: note: place parentheses around the '&&' expression to silence this warning if ( !i1 && !i2 || i1 && i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1154:36: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !i1 && !i2 || i1 && i2 ) { ~~ ~~~^~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1154:36: note: place parentheses around the '&&' expression to silence this warning if ( !i1 && !i2 || i1 && i2 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1183:33: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1183:33: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1183:33: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1190:69: warning: '&&' within '||' [-Wlogical-op-parentheses] !(at2[j].endpoint || pStruct->endpoint && pStruct->endpoint[j]) ) { ~~ ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1190:69: note: place parentheses around the '&&' expression to silence this warning !(at2[j].endpoint || pStruct->endpoint && pStruct->endpoint[j]) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1194:37: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1194:37: note: place parentheses around the assignment to silence this warning if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1194:37: note: use '==' to turn this assignment into an equality comparison if (ret = AddToEdgeList( TautMinusEdges+0, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1202:42: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1202:42: note: place parentheses around the assignment to silence this warning if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1202:42: note: use '==' to turn this assignment into an equality comparison if ( ret = AddToEdgeList( &AllChargeEdges, k, INC_ADD_EDGE ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1230:46: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1230:46: note: place parentheses around the '&&' expression to silence this warning if ( ret == 1 && (vPathEnd == v1 && vPathStart == v2 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1231:46: warning: '&&' within '||' [-Wlogical-op-parentheses] vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1231:46: note: place parentheses around the '&&' expression to silence this warning vPathEnd == v2 && vPathStart == v1) && nDeltaCharge == 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1255:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1255:22: note: place parentheses around the assignment to silence this warning if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr6.c:1255:22: note: use '==' to turn this assignment into an equality comparison if ( ret = FillOutExtraFixedHDataRestr( pStruct ) ) { ^ == 40 warnings generated. [ 17%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichirvr7.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:119:79: warning: '&&' within '||' [-Wlogical-op-parentheses] OneInput->pInpInChI[iINChI][TAUT_NON][iComponent].nNumberOfAtoms > 0 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:119:79: note: place parentheses around the '&&' expression to silence this warning OneInput->pInpInChI[iINChI][TAUT_NON][iComponent].nNumberOfAtoms > 0 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:187:28: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( eqM && (!isF1 && !isF2 || eqF ) ) { ~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:187:28: note: place parentheses around the '&&' expression to silence this warning if ( eqM && (!isF1 && !isF2 || eqF ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:257:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_NON] ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:257:25: note: place parentheses around the assignment to silence this warning if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_NON] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:257:25: note: use '==' to turn this assignment into an equality comparison if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_NON] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:261:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_YES] ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:261:25: note: place parentheses around the assignment to silence this warning if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_YES] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:261:25: note: use '==' to turn this assignment into an equality comparison if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_YES] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:265:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_NON] ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:265:25: note: place parentheses around the assignment to silence this warning if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_NON] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:265:25: note: use '==' to turn this assignment into an equality comparison if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_NON] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:269:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_YES] ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:269:25: note: place parentheses around the assignment to silence this warning if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_YES] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:269:25: note: use '==' to turn this assignment into an equality comparison if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_YES] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:320:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( len = nAtomOffs[k+1] - nAtomOffs[k] ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:320:18: note: place parentheses around the assignment to silence this warning if ( len = nAtomOffs[k+1] - nAtomOffs[k] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:320:18: note: use '==' to turn this assignment into an equality comparison if ( len = nAtomOffs[k+1] - nAtomOffs[k] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:322:23: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( len2 = nDelHOffs[k+1] - nDelHOffs[k] ) { ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:322:23: note: place parentheses around the assignment to silence this warning if ( len2 = nDelHOffs[k+1] - nDelHOffs[k] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:322:23: note: use '==' to turn this assignment into an equality comparison if ( len2 = nDelHOffs[k+1] - nDelHOffs[k] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:750:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !iMobileH && !pOneInput->pInpInChI[iInchiRec][iMobileH][k].nNumberOfAtoms || ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:750:32: note: place parentheses around the '&&' expression to silence this warning if ( !iMobileH && !pOneInput->pInpInChI[iInchiRec][iMobileH][k].nNumberOfAtoms || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:851:67: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( iInchiRec == INCHI_REC || iInchiRec == INCHI_BAS && (k1=pStruct[iInchiRec][TAUT_YES][k].nLink) >= 0 ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:851:67: note: place parentheses around the '&&' expression to silence this warning if ( iInchiRec == INCHI_REC || iInchiRec == INCHI_BAS && (k1=pStruct[iInchiRec][TAUT_YES][k].nLink) >= 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1630:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pStruct->RevInChI.num_components[i] > 1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1630:54: note: place parentheses around the '&&' expression to silence this warning if ( pStruct->RevInChI.num_components[i] > 1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1652:63: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pStruct->RevInChI.pINChI[i][0][TAUT_YES] && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1652:63: note: place parentheses around the '&&' expression to silence this warning if ( pStruct->RevInChI.pINChI[i][0][TAUT_YES] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1654:32: warning: '&&' within '||' [-Wlogical-op-parentheses] pInChI[1] && !pInChI[1]->bDeleted ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1654:32: note: place parentheses around the '&&' expression to silence this warning pInChI[1] && !pInChI[1]->bDeleted ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1812:59: warning: '&&' within '||' [-Wlogical-op-parentheses] s1->nBondAtom1[j1] == s2->nBondAtom1[j2] && s1->nBondAtom2[j1] < s2->nBondAtom2[j2]) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1812:59: note: place parentheses around the '&&' expression to silence this warning s1->nBondAtom1[j1] == s2->nBondAtom1[j2] && s1->nBondAtom2[j1] < s2->nBondAtom2[j2]) { ^ ( ) 40 warnings generated. [ 17%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichirvr7.c.o Linking CXX static library libOptimizer_static.a /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:119:79: warning: '&&' within '||' [-Wlogical-op-parentheses] OneInput->pInpInChI[iINChI][TAUT_NON][iComponent].nNumberOfAtoms > 0 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:119:79: note: place parentheses around the '&&' expression to silence this warning OneInput->pInpInChI[iINChI][TAUT_NON][iComponent].nNumberOfAtoms > 0 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:187:28: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( eqM && (!isF1 && !isF2 || eqF ) ) { ~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:187:28: note: place parentheses around the '&&' expression to silence this warning if ( eqM && (!isF1 && !isF2 || eqF ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:257:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_NON] ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:257:25: note: place parentheses around the assignment to silence this warning if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_NON] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:257:25: note: use '==' to turn this assignment into an equality comparison if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_NON] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:261:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_YES] ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:261:25: note: place parentheses around the assignment to silence this warning if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_YES] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:261:25: note: use '==' to turn this assignment into an equality comparison if ( num_components = pOneInput->nNumComponents[INCHI_REC][TAUT_YES] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:265:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_NON] ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:265:25: note: place parentheses around the assignment to silence this warning if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_NON] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:265:25: note: use '==' to turn this assignment into an equality comparison if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_NON] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:269:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_YES] ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:269:25: note: place parentheses around the assignment to silence this warning if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_YES] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:269:25: note: use '==' to turn this assignment into an equality comparison if ( num_components = pOneInput->nNumComponents[INCHI_BAS][TAUT_YES] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:320:18: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( len = nAtomOffs[k+1] - nAtomOffs[k] ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:320:18: note: place parentheses around the assignment to silence this warning if ( len = nAtomOffs[k+1] - nAtomOffs[k] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:320:18: note: use '==' to turn this assignment into an equality comparison if ( len = nAtomOffs[k+1] - nAtomOffs[k] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:322:23: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( len2 = nDelHOffs[k+1] - nDelHOffs[k] ) { ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:322:23: note: place parentheses around the assignment to silence this warning if ( len2 = nDelHOffs[k+1] - nDelHOffs[k] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:322:23: note: use '==' to turn this assignment into an equality comparison if ( len2 = nDelHOffs[k+1] - nDelHOffs[k] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:750:32: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !iMobileH && !pOneInput->pInpInChI[iInchiRec][iMobileH][k].nNumberOfAtoms || ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:750:32: note: place parentheses around the '&&' expression to silence this warning if ( !iMobileH && !pOneInput->pInpInChI[iInchiRec][iMobileH][k].nNumberOfAtoms || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:851:67: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( iInchiRec == INCHI_REC || iInchiRec == INCHI_BAS && (k1=pStruct[iInchiRec][TAUT_YES][k].nLink) >= 0 ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:851:67: note: place parentheses around the '&&' expression to silence this warning if ( iInchiRec == INCHI_REC || iInchiRec == INCHI_BAS && (k1=pStruct[iInchiRec][TAUT_YES][k].nLink) >= 0 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1630:54: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pStruct->RevInChI.num_components[i] > 1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1630:54: note: place parentheses around the '&&' expression to silence this warning if ( pStruct->RevInChI.num_components[i] > 1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1652:63: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( pStruct->RevInChI.pINChI[i][0][TAUT_YES] && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1652:63: note: place parentheses around the '&&' expression to silence this warning if ( pStruct->RevInChI.pINChI[i][0][TAUT_YES] && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1654:32: warning: '&&' within '||' [-Wlogical-op-parentheses] pInChI[1] && !pInChI[1]->bDeleted ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1654:32: note: place parentheses around the '&&' expression to silence this warning pInChI[1] && !pInChI[1]->bDeleted ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1812:59: warning: '&&' within '||' [-Wlogical-op-parentheses] s1->nBondAtom1[j1] == s2->nBondAtom1[j2] && s1->nBondAtom2[j1] < s2->nBondAtom2[j2]) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichirvr7.c:1812:59: note: place parentheses around the '&&' expression to silence this warning s1->nBondAtom1[j1] == s2->nBondAtom1[j2] && s1->nBondAtom2[j1] < s2->nBondAtom2[j2]) { ^ ( ) /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libOptimizer_static.a(BFGSOpt.cpp.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libOptimizer_static.a(LinearSearch.cpp.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libOptimizer_static.a(BFGSOpt.cpp.o) has no symbols /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: file: libOptimizer_static.a(LinearSearch.cpp.o) has no symbols warning: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ranlib: warning for library: libOptimizer_static.a the table of contents is empty (no object file members in the library define global symbols) [ 17%] Built target Optimizer_static [ 18%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib_static.dir/UniformGrid3D.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 18%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/inchi_dll_main.c.o [ 18%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/inchi_dll_main.c.o 14 warnings generated. [ 18%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/runichi.c.o [ 18%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/runichi.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1562:26: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1562:26: note: place parentheses around the '&&' expression to silence this warning if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1563:26: warning: '&&' within '||' [-Wlogical-op-parentheses] k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) { ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1563:26: note: place parentheses around the '&&' expression to silence this warning k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1688:50: warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1688:50: note: place parentheses around the '&&' expression to silence this warning int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1689:50: warning: '&&' within '||' [-Wlogical-op-parentheses] cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1689:50: note: place parentheses around the '&&' expression to silence this warning cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1705:78: warning: '&&' within '||' [-Wlogical-op-parentheses] pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1705:78: note: place parentheses around the '&&' expression to silence this warning pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2407:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 0 ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2407:16: note: place parentheses around the assignment to silence this warning if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 0 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2407:16: note: use '==' to turn this assignment into an equality comparison if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 0 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2438:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( i = bNumHeterAtomHasIsotopicH( prep_inp_data->at, prep_inp_data->num_inp_atoms ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2438:12: note: place parentheses around the assignment to silence this warning if ( i = bNumHeterAtomHasIsotopicH( prep_inp_data->at, prep_inp_data->num_inp_atoms ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2438:12: note: use '==' to turn this assignment into an equality comparison if ( i = bNumHeterAtomHasIsotopicH( prep_inp_data->at, prep_inp_data->num_inp_atoms ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2532:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 1 ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2532:20: note: place parentheses around the assignment to silence this warning if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2532:20: note: use '==' to turn this assignment into an equality comparison if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1562:26: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1562:26: note: place parentheses around the '&&' expression to silence this warning if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1563:26: warning: '&&' within '||' [-Wlogical-op-parentheses] k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) { ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1563:26: note: place parentheses around the '&&' expression to silence this warning k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1688:50: warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1688:50: note: place parentheses around the '&&' expression to silence this warning int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1689:50: warning: '&&' within '||' [-Wlogical-op-parentheses] cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1689:50: note: place parentheses around the '&&' expression to silence this warning cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1705:78: warning: '&&' within '||' [-Wlogical-op-parentheses] pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:1705:78: note: place parentheses around the '&&' expression to silence this warning pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:3422:85: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( iINChI == INCHI_REC && (!ip->bDisplay && !ip->bDisplayCompositeResults && !(ip->bCompareComponents & CMP_COMPONENTS) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:3422:85: note: place parentheses around the '&&' expression to silence this warning if ( iINChI == INCHI_REC && (!ip->bDisplay && !ip->bDisplayCompositeResults && !(ip->bCompareComponents & CMP_COMPONENTS) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2407:16: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 0 ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2407:16: note: place parentheses around the assignment to silence this warning if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 0 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2407:16: note: use '==' to turn this assignment into an equality comparison if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 0 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2438:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( i = bNumHeterAtomHasIsotopicH( prep_inp_data->at, prep_inp_data->num_inp_atoms ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2438:12: note: place parentheses around the assignment to silence this warning if ( i = bNumHeterAtomHasIsotopicH( prep_inp_data->at, prep_inp_data->num_inp_atoms ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2438:12: note: use '==' to turn this assignment into an equality comparison if ( i = bNumHeterAtomHasIsotopicH( prep_inp_data->at, prep_inp_data->num_inp_atoms ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2532:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 1 ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2532:20: note: place parentheses around the assignment to silence this warning if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 1 ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:2532:20: note: use '==' to turn this assignment into an equality comparison if ( i = ReconcileAllCmlBondParities( prep_inp_data->at, prep_inp_data->num_inp_atoms, 1 ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:3422:85: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( iINChI == INCHI_REC && (!ip->bDisplay && !ip->bDisplayCompositeResults && !(ip->bCompareComponents & CMP_COMPONENTS) || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/runichi.c:3422:85: note: place parentheses around the '&&' expression to silence this warning if ( iINChI == INCHI_REC && (!ip->bDisplay && !ip->bDisplayCompositeResults && !(ip->bCompareComponents & CMP_COMPONENTS) || ^ ( ) 14 warnings generated. [ 18%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/inchi_dll_a.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a.c:397:9: warning: '&&' within '||' [-Wlogical-op-parentheses] && (!pInp || pInp->num_atoms <= 0 || !pInp->atom) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a.c:397:9: note: place parentheses around the '&&' expression to silence this warning && (!pInp || pInp->num_atoms <= 0 || !pInp->atom) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a.c:399:58: warning: '&&' within '||' [-Wlogical-op-parentheses] || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a.c:399:58: note: place parentheses around the '&&' expression to silence this warning || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ^ 2 warnings generated. 9 warnings generated. [ 18%] 9 warnings generated. Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/inchi_dll_a2.c.o [ 18%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/inchi_dll_a.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a.c:397:9: warning: '&&' within '||' [-Wlogical-op-parentheses] && (!pInp || pInp->num_atoms <= 0 || !pInp->atom) ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a.c:397:9: note: place parentheses around the '&&' expression to silence this warning && (!pInp || pInp->num_atoms <= 0 || !pInp->atom) ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a.c:399:58: warning: '&&' within '||' [-Wlogical-op-parentheses] || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a.c:399:58: note: place parentheses around the '&&' expression to silence this warning || argc==2 && ( argv[1][0]==INCHI_OPTION_PREFX ) && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:649:26: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:649:26: note: place parentheses around the '&&' expression to silence this warning if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:650:26: warning: '&&' within '||' [-Wlogical-op-parentheses] k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:650:26: note: place parentheses around the '&&' expression to silence this warning k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:773:50: warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:773:50: note: place parentheses around the '&&' expression to silence this warning int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:774:50: warning: '&&' within '||' [-Wlogical-op-parentheses] cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:774:50: note: place parentheses around the '&&' expression to silence this warning cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:789:78: warning: '&&' within '||' [-Wlogical-op-parentheses] pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:789:78: note: place parentheses around the '&&' expression to silence this warning pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:959:50: warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:959:50: note: place parentheses around the '&&' expression to silence this warning int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:960:50: warning: '&&' within '||' [-Wlogical-op-parentheses] cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:960:50: note: place parentheses around the '&&' expression to silence this warning cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:975:78: warning: '&&' within '||' [-Wlogical-op-parentheses] pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:975:78: note: place parentheses around the '&&' expression to silence this warning pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1074:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !out_norm_data[TAUT_NON]->at && !out_norm_data[TAUT_YES]->at || !inp_at || ret ) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1074:39: note: place parentheses around the '&&' expression to silence this warning if ( !out_norm_data[TAUT_NON]->at && !out_norm_data[TAUT_YES]->at || !inp_at || ret ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1372:53: warning: '&&' within '||' [-Wlogical-op-parentheses] 1 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[1] || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1372:53: note: place parentheses around the '&&' expression to silence this warning 1 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[1] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1373:53: warning: '&&' within '||' [-Wlogical-op-parentheses] 2 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[2]) ; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1373:53: note: place parentheses around the '&&' expression to silence this warning 2 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[2]) ; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1370:89: warning: '&&' within '||' [-Wlogical-op-parentheses] z->s[TAUT_YES].nLenLinearCTTautomer > 0 && t_group_info && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1370:89: note: place parentheses around the '&&' expression to silence this warning z->s[TAUT_YES].nLenLinearCTTautomer > 0 && t_group_info && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1376:90: warning: '&&' within '||' [-Wlogical-op-parentheses] z->s[TAUT_YES].nLenIsotopicEndpoints > 1 && t_group_info && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1376:90: note: place parentheses around the '&&' expression to silence this warning z->s[TAUT_YES].nLenIsotopicEndpoints > 1 && t_group_info && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1589:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret= AllocateCS( pCS, z->num_atoms, z->num_atoms, z->s[TAUT_NON].nLenCT, z->s[TAUT_NON].nLenCTAtOnly, ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1589:21: note: place parentheses around the assignment to silence this warning if ( ret= AllocateCS( pCS, z->num_atoms, z->num_atoms, z->s[TAUT_NON].nLenCT, z->s[TAUT_NON].nLenCTAtOnly, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1589:21: note: use '==' to turn this assignment into an equality comparison if ( ret= AllocateCS( pCS, z->num_atoms, z->num_atoms, z->s[TAUT_NON].nLenCT, z->s[TAUT_NON].nLenCTAtOnly, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1624:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret= AllocateCS( pCS, z->num_atoms, z->num_at_tg, z->s[TAUT_YES].nLenCT, z->s[TAUT_YES].nLenCTAtOnly, ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1624:21: note: place parentheses around the assignment to silence this warning if ( ret= AllocateCS( pCS, z->num_atoms, z->num_at_tg, z->s[TAUT_YES].nLenCT, z->s[TAUT_YES].nLenCTAtOnly, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1624:21: note: use '==' to turn this assignment into an equality comparison if ( ret= AllocateCS( pCS, z->num_atoms, z->num_at_tg, z->s[TAUT_YES].nLenCT, z->s[TAUT_YES].nLenCTAtOnly, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1833:57: warning: '&&' within '||' [-Wlogical-op-parentheses] all_inp_norm_data[i][j].at_fixed_bonds && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1833:57: note: place parentheses around the '&&' expression to silence this warning all_inp_norm_data[i][j].at_fixed_bonds && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2088:35: warning: '&&' within '||' [-Wlogical-op-parentheses] (pCS->LinearCTStereoCarb && pCS->LinearCTStereoCarbInv || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2088:35: note: place parentheses around the '&&' expression to silence this warning (pCS->LinearCTStereoCarb && pCS->LinearCTStereoCarbInv || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2089:35: warning: '&&' within '||' [-Wlogical-op-parentheses] pCS->LinearCTStereoDble && pCS->LinearCTStereoDbleInv) && ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2089:35: note: place parentheses around the '&&' expression to silence this warning pCS->LinearCTStereoDble && pCS->LinearCTStereoDbleInv) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2275:69: warning: '&&' within '||' [-Wlogical-op-parentheses] t_group_info->nNumIsotopicEndpoints>1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2275:69: note: place parentheses around the '&&' expression to silence this warning t_group_info->nNumIsotopicEndpoints>1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2339:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2339:28: note: place parentheses around the assignment to silence this warning if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2339:28: note: use '==' to turn this assignment into an equality comparison if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2363:43: warning: '&&' within '||' [-Wlogical-op-parentheses] (pCS->LinearCTIsotopicStereoCarb && pCS->LinearCTIsotopicStereoCarbInv || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2363:43: note: place parentheses around the '&&' expression to silence this warning (pCS->LinearCTIsotopicStereoCarb && pCS->LinearCTIsotopicStereoCarbInv || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2364:43: warning: '&&' within '||' [-Wlogical-op-parentheses] pCS->LinearCTIsotopicStereoDble && pCS->LinearCTIsotopicStereoDbleInv) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2364:43: note: place parentheses around the '&&' expression to silence this warning pCS->LinearCTIsotopicStereoDble && pCS->LinearCTIsotopicStereoDbleInv) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2500:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2500:28: note: place parentheses around the assignment to silence this warning if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2500:28: note: use '==' to turn this assignment into an equality comparison if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ^ == In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/EigenSolvers/PowerEigenSolver.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Alignment/AlignPoints.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Alignment/AlignPoints.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 2 warnings generated. [ 19%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/inchi_dll_a2.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:649:26: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:649:26: note: place parentheses around the '&&' expression to silence this warning if ( k==TAUT_NON && (ip->nMode & REQ_MODE_BASIC ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:650:26: warning: '&&' within '||' [-Wlogical-op-parentheses] k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:650:26: note: place parentheses around the '&&' expression to silence this warning k==TAUT_YES && (ip->nMode & REQ_MODE_TAUT ) ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:773:50: warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:773:50: note: place parentheses around the '&&' expression to silence this warning int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:774:50: warning: '&&' within '||' [-Wlogical-op-parentheses] cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:774:50: note: place parentheses around the '&&' expression to silence this warning cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:789:78: warning: '&&' within '||' [-Wlogical-op-parentheses] pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:789:78: note: place parentheses around the '&&' expression to silence this warning pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:959:50: warning: '&&' within '||' [-Wlogical-op-parentheses] int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:959:50: note: place parentheses around the '&&' expression to silence this warning int cur_is_non_taut = cur_is_in_non_taut && 0 == pINChI[i][TAUT_NON]->lenTautomer || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:960:50: warning: '&&' within '||' [-Wlogical-op-parentheses] cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:960:50: note: place parentheses around the '&&' expression to silence this warning cur_is_in_taut && 0 == pINChI[i][TAUT_YES]->lenTautomer; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:975:78: warning: '&&' within '||' [-Wlogical-op-parentheses] pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:975:78: note: place parentheses around the '&&' expression to silence this warning pINChI[i][j]->nPossibleLocationsOfIsotopicH && pINChI[i][j]->nPossibleLocationsOfIsotopicH[0]>1); ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1074:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !out_norm_data[TAUT_NON]->at && !out_norm_data[TAUT_YES]->at || !inp_at || ret ) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1074:39: note: place parentheses around the '&&' expression to silence this warning if ( !out_norm_data[TAUT_NON]->at && !out_norm_data[TAUT_YES]->at || !inp_at || ret ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1372:53: warning: '&&' within '||' [-Wlogical-op-parentheses] 1 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[1] || ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1372:53: note: place parentheses around the '&&' expression to silence this warning 1 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[1] || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1373:53: warning: '&&' within '||' [-Wlogical-op-parentheses] 2 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[2]) ; ~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1373:53: note: place parentheses around the '&&' expression to silence this warning 2 < NUM_H_ISOTOPES && t_group_info->tni.nNumRemovedProtonsIsotopic[2]) ; ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1370:89: warning: '&&' within '||' [-Wlogical-op-parentheses] z->s[TAUT_YES].nLenLinearCTTautomer > 0 && t_group_info && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1370:89: note: place parentheses around the '&&' expression to silence this warning z->s[TAUT_YES].nLenLinearCTTautomer > 0 && t_group_info && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1376:90: warning: '&&' within '||' [-Wlogical-op-parentheses] z->s[TAUT_YES].nLenIsotopicEndpoints > 1 && t_group_info && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1376:90: note: place parentheses around the '&&' expression to silence this warning z->s[TAUT_YES].nLenIsotopicEndpoints > 1 && t_group_info && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1589:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret= AllocateCS( pCS, z->num_atoms, z->num_atoms, z->s[TAUT_NON].nLenCT, z->s[TAUT_NON].nLenCTAtOnly, ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1589:21: note: place parentheses around the assignment to silence this warning if ( ret= AllocateCS( pCS, z->num_atoms, z->num_atoms, z->s[TAUT_NON].nLenCT, z->s[TAUT_NON].nLenCTAtOnly, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1589:21: note: use '==' to turn this assignment into an equality comparison if ( ret= AllocateCS( pCS, z->num_atoms, z->num_atoms, z->s[TAUT_NON].nLenCT, z->s[TAUT_NON].nLenCTAtOnly, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1624:21: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret= AllocateCS( pCS, z->num_atoms, z->num_at_tg, z->s[TAUT_YES].nLenCT, z->s[TAUT_YES].nLenCTAtOnly, ~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1624:21: note: place parentheses around the assignment to silence this warning if ( ret= AllocateCS( pCS, z->num_atoms, z->num_at_tg, z->s[TAUT_YES].nLenCT, z->s[TAUT_YES].nLenCTAtOnly, ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1624:21: note: use '==' to turn this assignment into an equality comparison if ( ret= AllocateCS( pCS, z->num_atoms, z->num_at_tg, z->s[TAUT_YES].nLenCT, z->s[TAUT_YES].nLenCTAtOnly, ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1833:57: warning: '&&' within '||' [-Wlogical-op-parentheses] all_inp_norm_data[i][j].at_fixed_bonds && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:1833:57: note: place parentheses around the '&&' expression to silence this warning all_inp_norm_data[i][j].at_fixed_bonds && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2088:35: warning: '&&' within '||' [-Wlogical-op-parentheses] (pCS->LinearCTStereoCarb && pCS->LinearCTStereoCarbInv || ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2088:35: note: place parentheses around the '&&' expression to silence this warning (pCS->LinearCTStereoCarb && pCS->LinearCTStereoCarbInv || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2089:35: warning: '&&' within '||' [-Wlogical-op-parentheses] pCS->LinearCTStereoDble && pCS->LinearCTStereoDbleInv) && ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2089:35: note: place parentheses around the '&&' expression to silence this warning pCS->LinearCTStereoDble && pCS->LinearCTStereoDbleInv) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2275:69: warning: '&&' within '||' [-Wlogical-op-parentheses] t_group_info->nNumIsotopicEndpoints>1 && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2275:69: note: place parentheses around the '&&' expression to silence this warning t_group_info->nNumIsotopicEndpoints>1 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2339:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2339:28: note: place parentheses around the assignment to silence this warning if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2339:28: note: use '==' to turn this assignment into an equality comparison if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->Stereo, nUserMode ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2363:43: warning: '&&' within '||' [-Wlogical-op-parentheses] (pCS->LinearCTIsotopicStereoCarb && pCS->LinearCTIsotopicStereoCarbInv || ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2363:43: note: place parentheses around the '&&' expression to silence this warning (pCS->LinearCTIsotopicStereoCarb && pCS->LinearCTIsotopicStereoCarbInv || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2364:43: warning: '&&' within '||' [-Wlogical-op-parentheses] pCS->LinearCTIsotopicStereoDble && pCS->LinearCTIsotopicStereoDbleInv) && ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2364:43: note: place parentheses around the '&&' expression to silence this warning pCS->LinearCTIsotopicStereoDble && pCS->LinearCTIsotopicStereoDbleInv) && ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2500:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2500:28: note: place parentheses around the assignment to silence this warning if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/inchi_dll_a2.c:2500:28: note: use '==' to turn this assignment into an equality comparison if ( nStereoUnmarkMode = UnmarkAllUndefinedUnknownStereo( pINChI->StereoIsotopic, nUserMode ) ) { ^ == 23 warnings generated. [ 19%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ikey_dll.c.o Scanning dependencies of target DistGeometry_static /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ikey_dll.c:266:9: warning: '/*' within block comment [-Wcomment] /* source string ( was sproto[ncp]='\0'; should be sproto[lenproto]='\0'; ) */ ^ 1 warning generated. [ 20%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ikey_base26.c.o 23 warnings generated. [ 20%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ikey_dll.c.o [ 20%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry_static.dir/DistGeomUtils.cpp.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ikey_dll.c:266:9: warning: '/*' within block comment [-Wcomment] /* source string ( was sproto[ncp]='\0'; should be sproto[lenproto]='\0'; ) */ ^ [ 20%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/ichi_io.c.o 1 warning generated. [ 20%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ikey_base26.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_io.c:723:19: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( p = inchi_fgetsTab( szSkip, sizeof(szSkip)-1, f ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_io.c:723:19: note: place parentheses around the assignment to silence this warning while ( p = inchi_fgetsTab( szSkip, sizeof(szSkip)-1, f ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_io.c:723:19: note: use '==' to turn this assignment into an equality comparison while ( p = inchi_fgetsTab( szSkip, sizeof(szSkip)-1, f ) ) { ^ == [ 20%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/ichi_io.c.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/UniformGrid3D.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/UniformGrid3D.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_io.c:723:19: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( p = inchi_fgetsTab( szSkip, sizeof(szSkip)-1, f ) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_io.c:723:19: note: place parentheses around the assignment to silence this warning while ( p = inchi_fgetsTab( szSkip, sizeof(szSkip)-1, f ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/ichi_io.c:723:19: note: use '==' to turn this assignment into an equality comparison while ( p = inchi_fgetsTab( szSkip, sizeof(szSkip)-1, f ) ) { ^ == 1 warning generated. [ 20%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/sha2.c.o 1 warning generated. [ 20%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/sha2.c.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/DistGeomUtils.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/BoundsMatrix.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 20%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry_static.dir/TriangleSmooth.cpp.o [ 20%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/strutil.c.o [ 21%] Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/strutil.c.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/TriangleSmooth.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/BoundsMatrix.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:477:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c: for ( b = el; e = strchr( b, ';'); b = e+1 ) ~~^~~~~~~~~~~~~~~~~477:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:477:25: note: place parentheses around the assignment to silence this warning for ( b = el; e = strchr( b, ';'); b = e+1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:477:25: note: use '==' to turn this assignment into an equality comparison for ( b = el; e = strchr( b, ';'); b = e+1 ) for ( b = el; e = strchr( b, ';'); b = e+1 ) ^ == ~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:477:25: note: place parentheses around the assignment to silence this warning for ( b = el; e = strchr( b, ';'); b = e+1 ) ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:477:25: note: use '==' to turn this assignment into an equality comparison for ( b = el; e = strchr( b, ';'); b = e+1 ) ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:514:29: warning: '&&' within '||' [-Wlogical-op-parentheses] at[i1].radical && RADICAL_SINGLET != at[i1].radical || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:514:29: note: place parentheses around the '&&' expression to silence this warning at[i1].radical && RADICAL_SINGLET != at[i1].radical || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:514:29: warning: '&&' within '||' [-Wlogical-op-parentheses] at[i1].radical && RADICAL_SINGLET != at[i1].radical || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:514:29: note: place parentheses around the '&&' expression to silence this warning at[i1].radical && RADICAL_SINGLET != at[i1].radical || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:916:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] for ( b = el; e = strchr( b, ';'); b = e+1 ) { ~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:916:25: note: place parentheses around the assignment to silence this warning for ( b = el; e = strchr( b, ';'); b = e+1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:916:25: note: use '==' to turn this assignment into an equality comparison for ( b = el; e = strchr( b, ';'); b = e+1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:928:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = (char*)memchr( en, a->el_number, ne) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:928:20: note: place parentheses around the assignment to silence this warning if ( p = (char*)memchr( en, a->el_number, ne) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:928:20: note: use '==' to turn this assignment into an equality comparison if ( p = (char*)memchr( en, a->el_number, ne) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:916:25: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] for ( b = el; e = strchr( b, ';'); b = e+1 ) { ~~^~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:916:25: note: place parentheses around the assignment to silence this warning for ( b = el; e = strchr( b, ';'); b = e+1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:916:25: note: use '==' to turn this assignment into an equality comparison for ( b = el; e = strchr( b, ';'); b = e+1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:928:20: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = (char*)memchr( en, a->el_number, ne) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:928:20: note: place parentheses around the assignment to silence this warning if ( p = (char*)memchr( en, a->el_number, ne) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:928:20: note: use '==' to turn this assignment into an equality comparison if ( p = (char*)memchr( en, a->el_number, ne) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1095:33: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !type || 2 <= type && type <= 9 ) { ~~ ~~~~~~~~~~^~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1095:33: note: place parentheses around the '&&' expression to silence this warning if ( !type || 2 <= type && type <= 9 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1095:33: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !type || 2 <= type && type <= 9 ) { ~~ ~~~~~~~~~~^~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1095:33: note: place parentheses around the '&&' expression to silence this warning if ( !type || 2 <= type && type <= 9 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1348:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !type || 10 <= type && type <= 15 ) { ~~ ~~~~~~~~~~~^~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1348:34: note: place parentheses around the '&&' expression to silence this warning if ( !type || 10 <= type && type <= 15 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1348:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !type || 10 <= type && type <= 15 ) { ~~ ~~~~~~~~~~~^~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1348:34: note: place parentheses around the '&&' expression to silence this warning if ( !type || 10 <= type && type <= 15 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1420:64: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !type || 12 == type && 0 < num_N_plus && 0 < num_N_minus ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1420:64: note: place parentheses around the '&&' expression to silence this warning if ( !type || 12 == type && 0 < num_N_plus && 0 < num_N_minus ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1420:64: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( !type || 12 == type && 0 < num_N_plus && 0 < num_N_minus ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1420:64: note: place parentheses around the '&&' expression to silence this warning if ( !type || 12 == type && 0 < num_N_plus && 0 < num_N_minus ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1678:55: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (!type || 18 == type) && (0 < num_C_plus && 0 < num_C_minus || 0 < num_C_II) ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1678:55: note: place parentheses around the '&&' expression to silence this warning if ( (!type || 18 == type) && (0 < num_C_plus && 0 < num_C_minus || 0 < num_C_II) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1700:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( v[k] == 4 || v[k] == 3 && at[i].bond_type[j[k]] == BOND_TYPE_SINGLE ) { ~~ ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1700:53: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1678:55: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( v[k] == 4 || v[k] == 3 && at[i].bond_type[j[k]] == BOND_TYPE_SINGLE ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ if ( (!type || 18 == type) && (0 < num_C_plus && 0 < num_C_minus || 0 < num_C_II) ) { ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1678:55: note: place parentheses around the '&&' expression to silence this warning /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1704:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( (!type || 18 == type) && (0 < num_C_plus && 0 < num_C_minus || 0 < num_C_II) ) { ^ ( ) if ( v[k] == 2 || v[k] == 3 && at[i].bond_type[j[k]] == BOND_TYPE_DOUBLE ) { ~~ ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1704:53: note: place parentheses around the '&&' expression to silence this warning if ( v[k] == 2 || v[k] == 3 && at[i].bond_type[j[k]] == BOND_TYPE_DOUBLE ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1700:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( v[k] == 4 || v[k] == 3 && at[i].bond_type[j[k]] == BOND_TYPE_SINGLE ) { ~~ ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1700:53: note: place parentheses around the '&&' expression to silence this warning if ( v[k] == 4 || v[k] == 3 && at[i].bond_type[j[k]] == BOND_TYPE_SINGLE ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1704:53: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( v[k] == 2 || v[k] == 3 && at[i].bond_type[j[k]] == BOND_TYPE_DOUBLE ) { ~~ ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1704:53: note: place parentheses around the '&&' expression to silence this warning if ( v[k] == 2 || v[k] == 3 && at[i].bond_type[j[k]] == BOND_TYPE_DOUBLE ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1809:74: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( k == at->sb_ord[m] || k == at->sn_ord[m] && val < 2 && ATOM_PARITY_WELL_DEF(at->sb_parity[m]) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1809:74: note: place parentheses around the '&&' expression to silence this warning if ( k == at->sb_ord[m] || k == at->sn_ord[m] && val < 2 && ATOM_PARITY_WELL_DEF(at->sb_parity[m]) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1809:74: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( k == at->sb_ord[m] || k == at->sn_ord[m] && val < 2 && ATOM_PARITY_WELL_DEF(at->sb_parity[m]) ) { ~~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1809:74: note: place parentheses around the '&&' expression to silence this warning if ( k == at->sb_ord[m] || k == at->sn_ord[m] && val < 2 && ATOM_PARITY_WELL_DEF(at->sb_parity[m]) ) { ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1963:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( component = at[iat].component ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1963:28: note: place parentheses around the assignment to silence this warning if ( component = at[iat].component ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1963:28: note: use '==' to turn this assignment into an equality comparison if ( component = at[iat].component ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1966:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( component = at[neigh].component ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1966:28: note: place parentheses around the assignment to silence this warning if ( component = at[neigh].component ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1966:28: note: use '==' to turn this assignment into an equality comparison if ( component = at[neigh].component ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1963:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( component = at[iat].component ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1963:28: note: place parentheses around the assignment to silence this warning if ( component = at[iat].component ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1963:28: note: use '==' to turn this assignment into an equality comparison if ( component = at[iat].component ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1966:28: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( component = at[neigh].component ) { ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1966:28: note: place parentheses around the assignment to silence this warning if ( component = at[neigh].component ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:1966:28: note: use '==' to turn this assignment into an equality comparison if ( component = at[neigh].component ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2010:35: warning: '&&' within '||' [-Wlogical-op-parentheses] at[neigh].charge && (at[neigh].el_number != el_number_O || at[neigh].charge + at[i].charge) || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2010:35: note: place parentheses around the '&&' expression to silence this warning at[neigh].charge && (at[neigh].el_number != el_number_O || at[neigh].charge + at[i].charge) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2011:36: warning: '&&' within '||' [-Wlogical-op-parentheses] at[neigh].radical && at[neigh].radical != RADICAL_SINGLET ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2011:36: note: place parentheses around the '&&' expression to silence this warning at[neigh].radical && at[neigh].radical != RADICAL_SINGLET ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2030:37: warning: '&&' within '||' [-Wlogical-op-parentheses] at[iC].radical && at[iC].radical != RADICAL_SINGLET /*|| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2030:37: note: place parentheses around the '&&' expression to silence this warning at[iC].radical && at[iC].radical != RADICAL_SINGLET /*|| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2010:35: warning: '&&' within '||' [-Wlogical-op-parentheses] at[neigh].charge && (at[neigh].el_number != el_number_O || at[neigh].charge + at[i].charge) || ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2010:35: note: place parentheses around the '&&' expression to silence this warning at[neigh].charge && (at[neigh].el_number != el_number_O || at[neigh].charge + at[i].charge) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2011:36: warning: '&&' within '||' [-Wlogical-op-parentheses] at[neigh].radical && at[neigh].radical != RADICAL_SINGLET ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2011:36: note: place parentheses around the '&&' expression to silence this warning at[neigh].radical && at[neigh].radical != RADICAL_SINGLET ) { ~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2030:37: warning: '&&' within '||' [-Wlogical-op-parentheses] at[iC].radical && at[iC].radical != RADICAL_SINGLET /*|| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2030:37: note: place parentheses around the '&&' expression to silence this warning at[iC].radical && at[iC].radical != RADICAL_SINGLET /*|| ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3 warnings generated. /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2185:23: warning: '&&' within '||' [-Wlogical-op-parentheses] ( (type & 1) && val == get_el_valence( at[i].el_number, 0, 0 ) || ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2185:23: note: place parentheses around the '&&' expression to silence this warning ( (type & 1) && val == get_el_valence( at[i].el_number, 0, 0 ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2186:23: warning: '&&' within '||' [-Wlogical-op-parentheses] (type & 2) && val == get_el_valence( at[i].el_number, 0, 1 ) ) || ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2186:23: note: place parentheses around the '&&' expression to silence this warning (type & 2) && val == get_el_valence( at[i].el_number, 0, 1 ) ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2184:28: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at[i].charge == 0 && ~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2184:28: note: place parentheses around the '&&' expression to silence this warning if ( at[i].charge == 0 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2188:21: warning: '&&' within '||' [-Wlogical-op-parentheses] (type & 1) && val == get_el_valence( at[i].el_number, at[i].charge, 0 ) ) { ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2188:21: note: place parentheses around the '&&' expression to silence this warning (type & 1) && val == get_el_valence( at[i].el_number, at[i].charge, 0 ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2215:36: warning: '&&' within '||' [-Wlogical-op-parentheses] at[iO].radical && at[iO].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2215:36: note: place parentheses around the '&&' expression to silence this warning at[iO].radical && at[iO].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2185:23: warning: '&&' within '||' [-Wlogical-op-parentheses] ( (type & 1) && val == get_el_valence( at[i].el_number, 0, 0 ) ||/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2225:36: warning: '&&' within '||' [-Wlogical-op-parentheses] ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ~~ at[iC].radical && at[iC].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2185:23: note: place parentheses around the '&&' expression to silence this warning 2225:36: note: place parentheses around the '&&' expression to silence this warning ( (type & 1) && val == get_el_valence( at[i].el_number, 0, 0 ) || ^ ( ) at[iC].radical && at[iC].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2186:23: warning: '&&' within '||' [-Wlogical-op-parentheses] (type & 2) && val == get_el_valence( at[i].el_number, 0, 1 ) ) || ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2186:23: note: place parentheses around the '&&' expression to silence this warning (type & 2) && val == get_el_valence( at[i].el_number, 0, 1 ) ) || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2184:28: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at[i].charge == 0 && ~~~~~~~~~~~~~~~~~~^~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2184:28: note: place parentheses around the '&&' expression to silence this warning if ( at[i].charge == 0 && ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2188:21: warning: '&&' within '||' [-Wlogical-op-parentheses] (type & 1) && val == get_el_valence( at[i].el_number, at[i].charge, 0 ) ) { ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2188:21: note: place parentheses around the '&&' expression to silence this warning (type & 1) && val == get_el_valence( at[i].el_number, at[i].charge, 0 ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2215:36: warning: '&&' within '||' [-Wlogical-op-parentheses]/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2306:28: warning: '&&' within '||' [-Wlogical-op-parentheses] at[i].radical && at[i].radical != RADICAL_SINGLET /* radical */ ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2306:28 at[iO].radical && at[iO].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2215:36: : note: place parentheses around the '&&' expression to silence this warning note: at[i].radical && at[i].radical != RADICAL_SINGLET /* radical */ ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~place parentheses around the '&&' expression to silence this warning at[iO].radical && at[iO].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2225:36: warning: '&&' within '||' [-Wlogical-op-parentheses] at[iC].radical && at[iC].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2225:36: note: place parentheses around the '&&' expression to silence this warning at[iC].radical && at[iC].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2306:28: warning: '&&' within '||' [-Wlogical-op-parentheses] at[i].radical && at[i].radical != RADICAL_SINGLET /* radical */ ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2306:28: note: place parentheses around the '&&' expression to silence this warning at[i].radical && at[i].radical != RADICAL_SINGLET /* radical */ ) { ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2687:23: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i && i != 2 && i != 3 || ~~~~~~~~~~~~~^~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2687:23: note: place parentheses around the '&&' expression to silence this warning if ( i && i != 2 && i != 3 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2688:30: warning: '&&' within '||' [-Wlogical-op-parentheses] at[iLigand].radical && at[iLigand].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2688:30: note: place parentheses around the '&&' expression to silence this warning at[iLigand].radical && at[iLigand].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2687:23: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i && i != 2 && i != 3 || ~~~~~~~~~~~~~^~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2687:23: note: place parentheses around the '&&' expression to silence this warning if ( i && i != 2 && i != 3 || ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2688:30: warning: '&&' within '||' [-Wlogical-op-parentheses] at[iLigand].radical && at[iLigand].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:2688:30: note: place parentheses around the '&&' expression to silence this warning at[iLigand].radical && at[iLigand].radical != RADICAL_SINGLET || ~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3124:45: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( abs(at->charge) > 1 || at->radical && RADICAL_SINGLET != at->radical ) { ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3124:45: note: place parentheses around the '&&' expression to silence this warning if ( abs(at->charge) > 1 || at->radical && RADICAL_SINGLET != at->radical ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3170:30: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at2->charge && at->charge || (at2->radical && RADICAL_SINGLET != at2->radical ) ) { ~~~~~~~~~~~~^~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3170:30: note: place parentheses around the '&&' expression to silence this warning if ( at2->charge && at->charge || (at2->radical && RADICAL_SINGLET != at2->radical ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3209:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( abs(at->charge) > 1 || at->radical && RADICAL_SINGLET != at->radical ) { ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3209:49: note: place parentheses around the '&&' expression to silence this warning if ( abs(at->charge) > 1 || at->radical && RADICAL_SINGLET != at->radical ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3257:34: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at2->charge && at->charge || (at2->radical && RADICAL_SINGLET != at2->radical ) ) { ~~~~~~~~~~~~^~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3257:34: note: Linking CXX static library libEigenSolvers_static.a place parentheses around the '&&' expression to silence this warning if ( at2->charge && at->charge || (at2->radical && RADICAL_SINGLET != at2->radical ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3124:45: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( abs(at->charge) > 1 || at->radical && RADICAL_SINGLET != at->radical ) { ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3124:45: note: place parentheses around the '&&' expression to silence this warning if ( abs(at->charge) > 1 || at->radical && RADICAL_SINGLET != at->radical ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3170:30: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( at2->charge && at->charge || (at2->radical && RADICAL_SINGLET != at2->radical ) ) { ~~~~~~~~~~~~^~~~~~~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3170:30: note: place parentheses around the '&&' expression to silence this warning if ( at2->charge && at->charge || (at2->radical && RADICAL_SINGLET != at2->radical ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3209:49: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( abs(at->charge) > 1 || at->radical && RADICAL_SINGLET != at->radical ) { ~~ ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3209:49: note: place parentheses around the '&&' expression to silence this warning if ( abs(at->charge) > 1 || at->radical && RADICAL_SINGLET != at->radical ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3257:34: warning: '&&' within '||' [-Wlogical-op-parentheses] /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3289:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( at2->charge && at->charge || (at2->radical && RADICAL_SINGLET != at2->radical ) ) { ~~~~~~~~~~~~^~~~~~~~~~~~~ ~~ if ( ret = (int)n2 - (int)n1 ) { ~~~~^~~~~~~~~~~~~~~~~~~/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3289:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)n2 - (int)n1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3289:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)n2 - (int)n1 ) { ^ == Scanning dependencies of target ForceField_static :3257:34: note: place parentheses around the '&&' expression to silence this warning if ( at2->charge && at->charge || (at2->radical && RADICAL_SINGLET != at2->radical ) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3289:14: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( ret = (int)n2 - (int)n1 ) { ~~~~^~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3289:14: note: place parentheses around the assignment to silence this warning if ( ret = (int)n2 - (int)n1 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3289:14: note: use '==' to turn this assignment into an equality comparison if ( ret = (int)n2 - (int)n1 ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3578:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pINChI = *ppINChI ) { ~~~~~~~^~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3578:17: note: place parentheses around the assignment to silence this warning if ( pINChI = *ppINChI ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3578:17: note: use '==' to turn this assignment into an equality comparison if ( pINChI = *ppINChI ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3578:17: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( pINChI = *ppINChI ) { ~~~~~~~^~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3578:17: note: place parentheses around the assignment to silence this warning if ( pINChI = *ppINChI ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:3578:17: note: use '==' to turn this assignment into an equality comparison if ( pINChI = *ppINChI ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4272:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( bAtomNeedsAlias = ALIASED_AT(i) ) { /* has isotopic implicit D or T; ignoring pure 1H */ ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4272:30: note: place parentheses around the assignment to silence this warning if ( bAtomNeedsAlias = ALIASED_AT(i) ) { /* has isotopic implicit D or T; ignoring pure 1H */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4272:30: note: use '==' to turn this assignment into an equality comparison if ( bAtomNeedsAlias = ALIASED_AT(i) ) { /* has isotopic implicit D or T; ignoring pure 1H */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4391:23: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( k=at[i].bond_stereo[j] ) { ~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4391:23: note: place parentheses around the assignment to silence this warning if ( k=at[i].bond_stereo[j] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4391:23: note: use '==' to turn this assignment into an equality comparison if ( k=at[i].bond_stereo[j] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4468:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i == num_atoms-1 && num_m || num_m == 8 ) { ~~~~~~~~~~~~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4468:39: note: place parentheses around the '&&' expression to silence this warning if ( i == num_atoms-1 && num_m || num_m == 8 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4272:30: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( bAtomNeedsAlias = ALIASED_AT(i) ) { /* has isotopic implicit D or T; ignoring pure 1H */ ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4490:39: warning/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4272:30:: '&&' within '||' [-Wlogical-op-parentheses] note: place parentheses around the assignment to silence this warning if ( i == num_atoms-1 && num_m || num_m == 8 ) { ~~~~~~~~~~~~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4490:39: if ( bAtomNeedsAlias = ALIASED_AT(i) ) { /* has isotopic implicit D or T; ignoring pure 1H */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4272:30: note: note: use '==' to turn this assignment into an equality comparison place parentheses around the '&&' expression to silence this warning if ( bAtomNeedsAlias = ALIASED_AT(i) ) { /* has isotopic implicit D or T; ignoring pure 1H */ ^ == if ( i == num_atoms-1 && num_m || num_m == 8 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4542:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i == num_atoms-1 && num_m || num_m == 8 ) { ~~~~~~~~~~~~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4542:39: note: place parentheses around the '&&' expression to silence this warning if ( i == num_atoms-1 && num_m || num_m == 8 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4391:23: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( k=at[i].bond_stereo[j] ) { ~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4391:23: note: place parentheses around the assignment to silence this warning if ( k=at[i].bond_stereo[j] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4391:23: note: use '==' to turn this assignment into an equality comparison if ( k=at[i].bond_stereo[j] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4468:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i == num_atoms-1 && num_m || num_m == 8 ) { ~~~~~~~~~~~~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4468:39: note: place parentheses around the '&&' expression to silence this warning if ( i == num_atoms-1 && num_m || num_m == 8 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4490:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i == num_atoms-1 && num_m || num_m == 8 ) { ~~~~~~~~~~~~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4490:39: note: place parentheses around the '&&' expression to silence this warning if ( i == num_atoms-1 && num_m || num_m == 8 ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4542:39: warning: '&&' within '||' [-Wlogical-op-parentheses] if ( i == num_atoms-1 && num_m || num_m == 8 ) { ~~~~~~~~~~~~~~~~~^~~~~~~~ ~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/strutil.c:4542:39: note: place parentheses around the '&&' expression to silence this warning if ( i == num_atoms-1 && num_m || num_m == 8 ) { ^ ( ) 3 warnings generated. Linking CXX static library libAlignment_static.a [ 21%] Built target EigenSolvers_static [ 21%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib_static.dir/GridUtils.cpp.o [ 21%] Built target Alignment_static [ 21%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/ForceField.cpp.o Scanning dependencies of target Catalogs [ 21%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/Catalog.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 36 warnings generated. 36 warnings generated. [ 21%] [ 21%] Building C object External/INCHI-API/CMakeFiles/Inchi_static.dir/src/util.c.o Building C object External/INCHI-API/CMakeFiles/Inchi.dir/src/util.c.o /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:429:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] while ( q = strpbrk( p, "+-^" ) ) { ~~^~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:429:15: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] :429: while ( q = strpbrk( p, "+-^" ) ) { ~~^~~~~~~~~~~~~~~~~~~~~ 15: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:429note: place parentheses around the assignment to silence this warning :15 while ( q = strpbrk( p, "+-^" ) ) { : ^note: place parentheses around the assignment to silence this warning ( ) while ( q = strpbrk( p, "+-^" ) ) { ^ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:429 ( ) :/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:429:15: 15: note: use '==' to turn this assignment into an equality comparison note while ( q = strpbrk( p, "+-^" ) ) { : ^ == use '==' to turn this assignment into an equality comparison while ( q = strpbrk( p, "+-^" ) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:437:24: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( nSign = (int)strtol( q+k, &r, 10 ) ) { /* fixed 12-5-2001 */ ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:437:24: note: place parentheses around the assignment to silence this warning if ( nSign = (int)strtol( q+k, &r, 10 ) ) { /* fixed 12-5-2001 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:437:24: note: use '==' to turn this assignment into an equality comparison /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:437:24: warning if ( nSign = (int)strtol( q+k, &r, 10 ) ) { /* fixed 12-5-2001 */: using the result of an assignment as a condition without parentheses [-Wparentheses] ^ == if ( nSign = (int)strtol( q+k, &r, 10 ) ) { /* fixed 12-5-2001 */ ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:437:24: note: place parentheses around the assignment to silence this warning if ( nSign = (int)strtol( q+k, &r, 10 ) ) { /* fixed 12-5-2001 */ ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:437:24: note: use '==' to turn this assignment into an equality comparison if ( nSign = (int)strtol( q+k, &r, 10 ) ) { /* fixed 12-5-2001 */ ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:557:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = ElData[el_number].cValence[NEUTRAL_STATE+charge][0] ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:557:22: note: place parentheses around the assignment to silence this warning if ( val = ElData[el_number].cValence[NEUTRAL_STATE+charge][0] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:557:22: note: use '==' to turn this assignment into an equality comparison if ( val = ElData[el_number].cValence[NEUTRAL_STATE+charge][0] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:557:22: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( val = ElData[el_number].cValence[NEUTRAL_STATE+charge][0] ) { ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:557:22: note: place parentheses around the assignment to silence this warning if ( val = ElData[el_number].cValence[NEUTRAL_STATE+charge][0] ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:557:22: note: use '==' to turn this assignment into an equality comparison if ( val = ElData[el_number].cValence[NEUTRAL_STATE+charge][0] ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:744:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = (const char*)memchr(source, 0, maxlen) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:744:12: note: place parentheses around the assignment to silence this warning if ( p = (const char*)memchr(source, 0, maxlen) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:744:12: note: use '==' to turn this assignment into an equality comparison if ( p = (const char*)memchr(source, 0, maxlen) ) { ^ == /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:744:12: warning: using the result of an assignment as a condition without parentheses [-Wparentheses] if ( p = (const char*)memchr(source, 0, maxlen) ) { ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:744:12: note: place parentheses around the assignment to silence this warning if ( p = (const char*)memchr(source, 0, maxlen) ) { ^ ( ) /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/src/util.c:744:12: note: use '==' to turn this assignment into an equality comparison if ( p = (const char*)memchr(source, 0, maxlen) ) { ^ == 3 warnings generated. [ 22%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/AngleBend.cpp.o 4 warnings generated. 4 warnings generated. Linking C static library libInchi_static.a Linking C shared library ../../lib/libInchi.dylib [ 22%] Built target Inchi [ 22%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogParams.cpp.o [ 22%] Built target Inchi_static [ 22%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/BondStretch.cpp.o [ 22%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry_static.dir/DistViolationContrib.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/GridUtils.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/UniformGrid3D.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/DistViolationContrib.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Catalogs/Catalog.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Catalogs/Catalog.h:16: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpprvalue references are a C++11 extension [-Wc++11-extensions] : this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/BondStretch.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/AngleBend.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/AngleBend.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 22%] [ 23%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs.dir/CatalogEntry.cpp.o Building CXX object Code/DistGeom/CMakeFiles/DistGeometry_static.dir/ChiralViolationContrib.cpp.o Scanning dependencies of target Catalogs_static [ 24%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs_static.dir/Catalog.cpp.o 3 warnings generated. Linking CXX static library libRDGeometryLib_static.a In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/ChiralViolationContrib.cpp:7: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/ChiralSet.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ Linking CXX shared library ../../lib/libCatalogs.dylib /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 24%] Built target RDGeometryLib_static [ 24%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/Nonbonded.cpp.o [ 24%] Built target Catalogs [ 24%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs_static.dir/CatalogParams.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Catalogs/Catalog.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Catalogs/Catalog.h:16: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/Nonbonded.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. [ 24%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/Inversion.cpp.o 3 warnings generated. [ 24%] Building CXX object Code/Catalogs/CMakeFiles/Catalogs_static.dir/CatalogEntry.cpp.o 3 warnings generated. Linking CXX static library libCatalogs_static.a [ 24%] Built target Catalogs_static [ 24%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/TorsionAngle.cpp.o Scanning dependencies of target Depictor_static [ 24%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor_static.dir/RDDepictor.cpp.o 3 warnings generated. Linking CXX static library libDistGeometry_static.a In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/Inversion.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/Inversion.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 24%] Built target DistGeometry_static [ 24%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/DistanceConstraint.cpp.o Scanning dependencies of target SmilesParse_static [ 24%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse_static.dir/SmilesParse.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/DistanceConstraint.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/TorsionAngle.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/TorsionAngle.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesParse.cpp:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target FileParsers_static 3 warnings generated. [ 25%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse_static.dir/SmilesParseOps.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/RDDepictor.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/RDDepictor.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 25%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/Mol2FileParser.cpp.o 3 warnings generated. [ 26%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor_static.dir/EmbeddedFrag.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesParseOps.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target GraphMol_static [ 26%] 3 warnings generated. Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/Atom.cpp.o [ 26%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse_static.dir/SmilesWrite.cpp.o 3 warnings generated. [ 27%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/AngleConstraint.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/Mol2FileParser.cpp:38: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/EmbeddedFrag.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesWrite.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 28%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/MolFileParser.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/AngleConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/AngleBend.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 28%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/TorsionConstraint.cpp.o 3 warnings generated. [ 28%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor_static.dir/DepictUtils.cpp.o 3 warnings generated. 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/QueryAtom.cpp.o [ 29%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/MolFileStereochem.cpp.o 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse_static.dir/SmartsWrite.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/TorsionConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/TorsionAngle.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn()In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryAtom.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryAtom.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmartsWrite.cpp:23: ^: 14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: 21: In file included from In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:/sw/include/boost-1_53/boost/shared_ptr.hpp:17: 21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp/sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491::49141: warning: rvalue references are a C++11 extension [-Wc++11-extensions] :41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp shared_ptr & operator=( std::unique_ptr && r ): 556 ^: 51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp/sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp::558558::5555:: warningwarning: : rvalue references are a C++11 extension [-Wc++11-extensions]rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileParser.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileStereochem.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileStereochem.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/DepictUtils.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. [ 29%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/PositionConstraint.cpp.o 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/QueryBond.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryBond.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryBond.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse_static.dir/smarts.tab.cpp.o 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/MolFileWriter.cpp.o 3 warnings generated. 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/ForwardSDMolSupplier.cpp.o Linking CXX static library libDepictor_static.a In file included from smarts.yy:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 29%] Built target Depictor_static [ 29%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/UFF/Params.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileWriter.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/PositionConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/PositionConstraint.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SanitException.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/Params.cpp:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target SubstructMatch_static [ 29%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch_static.dir/SubstructMatch.cpp.o 3 warnings generated. 3 warnings generated. [ 29%] [ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse_static.dir/smiles.tab.cpp.o Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/AngleBend.cpp.o 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/Bond.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Bond.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Bond.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/SDMolSupplier.cpp.o In file included from smiles.yy:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch_static.dir/SubstructUtils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructUtils.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructUtils.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructMatch.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/SDMolSupplier.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SanitException.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 29%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse_static.dir/lex.yysmarts.cpp.o In file included from smarts.ll:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target ChemReactions_static [ 29%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions_static.dir/Reaction.cpp.o 3 warnings generated. 3 warnings generated. 3 warnings generated. 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 30%] [ 32%] [ 32%] [ 32%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse_static.dir/lex.yysmiles.cpp.o Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/BondStretch.cpp.o Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/MolOps.cpp.o Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/SDWriter.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/BondStretch.cpp:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX static library libSubstructMatch_static.a [ 32%] Built target SubstructMatch_static [ 33%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions_static.dir/MDLParser.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolOps.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from smiles.ll:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 33%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/StretchBend.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/MDLParser.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/StretchBend.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/SDWriter.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolWriters.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target ChemTransforms_static [ 33%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms_static.dir/ChemTransforms.cpp.o 3 warnings generated. [ 33%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/FindRings.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FindRings.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Linking CXX static library libSmilesParse_static.a [ 33%] Built target SmilesParse_static [ 33%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions_static.dir/DaylightParser.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 33%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/SmilesMolSupplier.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/DaylightParser.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. [ 33%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/OopBend.cpp.o [ 34%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/ROMol.cpp.o 3 warnings generated. [ 34%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms_static.dir/MolFragmenter.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolSupplier.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.cpp:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/OopBend.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/OopBend.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target Subgraphs_static [ 34%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs_static.dir/Subgraphs.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemTransforms/MolFragmenter.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Subgraphs/Subgraphs.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 34%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions_static.dir/ReactionPickler.cpp.o 3 warnings generated. [ 34%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/SmilesWriter.cpp.o 3 warnings generated. [ 34%] 3 warnings generated. Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/TorsionAngle.cpp.o [ 34%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/RWMol.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/TorsionAngle.cpp:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/ReactionPickler.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/SmilesWriter.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolWriters.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 34%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs_static.dir/SubgraphUtils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RWMol.cpp:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RWMol.h:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target FragCatalog_static [ 34%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog_static.dir/FragCatalogUtils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. Linking CXX static library libChemTransforms_static.a [ 34%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/PeriodicTable.cpp.o [ 34%] Built target ChemTransforms_static [ 34%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/TDTMolSupplier.cpp.o 3 warnings generated. [ 34%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/Nonbonded.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogUtils.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 34%] In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/Nonbonded.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/Nonbonded.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/TDTWriter.cpp.o 3 warnings generated. [ 34%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions_static.dir/ReactionWriter.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolSupplier.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/ReactionWriter.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 34%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/atomic_data.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/TDTWriter.cpp:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolWriters.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target Descriptors_static 3 warnings generated. Linking CXX static library libSubgraphs_static.a [ 34%] Built target Subgraphs_static [ 35%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog_static.dir/FragCatGenerator.cpp.o [ 35%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors_static.dir/Crippen.cpp.o [ 35%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/QueryOps.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Catalogs/Catalog.h:16: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/Crippen.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 36%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/DistanceConstraint.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryOps.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryOps.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/DistanceConstraint.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. [ 36%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions_static.dir/ReactionDepict.cpp.o [ 36%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog_static.dir/FragCatalogEntry.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogEntry.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatParams.h:16: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 37%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/TplFileParser.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/ReactionDepict.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target Fingerprints_static In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:12: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:10:9: warning: '_RD_FRAG_CAT_GENERATOR_H_' is used as a header guard here, followed by #define of a different macro [-Wheader-guard] #ifndef _RD_FRAG_CAT_GENERATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:11:9: note: '_RD_FRAG_CAT_GENRATOR_H_' is defined here; did you mean '_RD_FRAG_CAT_GENERATOR_H_'? #define _RD_FRAG_CAT_GENRATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~ _RD_FRAG_CAT_GENERATOR_H_ [ 38%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/Fingerprints.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/Fingerprints.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/TplFileParser.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 38%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/AngleConstraint.cpp.o 4 warnings generated. [ 38%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/MolPickler.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 38%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors_static.dir/MolDescriptors.cpp.o 3 warnings generated. [ 38%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/TplFileWriter.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolPickler.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/MolDescriptors.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/TplFileWriter.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. Linking CXX static library libChemReactions_static.a [ 38%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog_static.dir/FragCatParams.cpp.o [ 38%] Built target ChemReactions_static [ 39%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/Canon.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatParams.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatParams.h:16: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 39%] Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/TorsionConstraint.cpp.o 3 warnings generated. 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Canon.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 40%] [ 40%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors_static.dir/MolSurf.cpp.o Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/PatternFingerprints.cpp.o 3 warnings generated. [ 40%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/AtomIterators.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/MolSurf.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/PatternFingerprints.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/AtomIterators.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 40%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/PDBParser.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/TorsionConstraint.cpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/round.hpp:14: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/PDBParser.cpp:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target PartialCharges_static [ 40%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges_static.dir/GasteigerCharges.cpp.o 3 warnings generated. [ 40%] 3 warnings generated. Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/PositionConstraint.cpp.o [ 40%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog_static.dir/FragFPGenerator.cpp.o 3 warnings generated. [ 40%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors_static.dir/Lipinski.cpp.o 3 warnings generated. [ 40%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/MorganFingerprints.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 40%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/PDBWriter.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/Lipinski.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 40%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/BondIterators.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/MorganFingerprints.cpp:36: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Catalogs/Catalog.h:16: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/PositionConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/PositionConstraint.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/PDBWriter.cpp:16: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/BondIterators.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/BondIterators.h:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. 3 warnings generated. [ 41%] [ 41%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges_static.dir/GasteigerParams.cpp.o Building CXX object Code/ForceField/CMakeFiles/ForceField_static.dir/MMFF/Params.cpp.o 3 warnings generated. [ 41%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors_static.dir/ConnectivityDescriptors.cpp.o 3 warnings generated. [ 41%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/Aromaticity.cpp.o Scanning dependencies of target MolTransforms_static [ 41%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms_static.dir/MolTransforms.cpp.o 3 warnings generated. Linking CXX static library libFragCatalog_static.a [ 41%] Built target FragCatalog_static [ 41%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/PDBSupplier.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Aromaticity.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 41%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/AtomPairs.cpp.o 3 warnings generated. Linking CXX static library libPartialCharges_static.a In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/Params.cpp:24: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 41%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints_static.dir/MACCS.cpp.o [ 41%] Built target PartialCharges_static [ 41%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors_static.dir/MQN.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolTransforms/MolTransforms.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolTransforms/MolTransforms.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/AtomPairs.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/MACCS.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/MQN.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/PDBSupplier.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolSupplier.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 41%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/Kekulize.cpp.o 3 warnings generated. Linking CXX static library libForceField_static.a In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Kekulize.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 41%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers_static.dir/ProximityBonds.cpp.o 3 warnings generated. Linking CXX static library libMolTransforms_static.a 3 warnings generated. [ 42%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/MolDiscriminators.cpp.o [ 42%] Built target MolTransforms_static [ 42%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/ConjugHybrid.cpp.o 3 warnings generated. [ 42%] Built target ForceField_static Linking CXX static library libDescriptors_static.a [ 42%] Built target Descriptors_static In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolDiscriminators.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolOps.h:16: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 42%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/AddHs.cpp.o Scanning dependencies of target DistGeomHelpers_static Scanning dependencies of target ForceFieldHelpers_static In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/ProximityBonds.cpp:10: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/ProximityBonds.h:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RWMol.h:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 42%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers_static.dir/BoundsMatrixBuilder.cpp.o 3 warnings generated. [ 43%] Linking CXX static library libFingerprints_static.a Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers_static.dir/UFF/AtomTyper.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ConjugHybrid.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 43%] Built target Fingerprints_static [ 43%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/RankAtoms.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/AddHs.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RankAtoms.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX static library libFileParsers_static.a 3 warnings generated. 3 warnings generated. [ 43%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers_static.dir/Embedder.cpp.o 3 warnings generated. [ 43%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers_static.dir/UFF/Builder.cpp.o [ 43%] Built target FileParsers_static [ 43%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/Matrices.cpp.o Scanning dependencies of target MolAlign_static [ 43%] In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/UFF/Builder.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign_static.dir/AlignMolecules.cpp.o 3 warnings generated. [ 44%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/Chirality.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/DistGeomHelpers/Embedder.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/DistGeomHelpers/Embedder.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Matrices.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Chirality.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/AlignMolecules.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/AlignMolecules.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 44%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign_static.dir/O3AAlignMolecules.cpp.o 3 warnings generated. [ 44%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers_static.dir/MMFF/AtomTyper.cpp.o Scanning dependencies of target MolChemicalFeatures_static In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/O3AAlignMolecules.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 44%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures_static.dir/MolChemicalFeature.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 44%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/RingInfo.cpp.o 3 warnings generated. 3 warnings generated. Linking CXX static library libDistGeomHelpers_static.a 3 warnings generated. [ 44%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures_static.dir/MolChemicalFeatureDef.cpp.o [ 44%] Built target DistGeomHelpers_static [ 44%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/Conformer.cpp.o [ 44%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures_static.dir/MolChemicalFeatureFactory.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target ShapeHelpers_static [ 44%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers_static.dir/ShapeEncoder.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Conformer.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Conformer.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ 3 warnings generated. /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 45%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures_static.dir/FeatureParser.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. [ 45%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers_static.dir/MMFF/Builder.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 45%] In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers_static.dir/ShapeUtils.cpp.o /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 45%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol_static.dir/Renumber.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeUtils.h:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.h:13: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target MolCatalog_static [ 45%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog_static.dir/MolCatalogEntry.cpp.o 3 warnings generated. 3 warnings generated. Linking CXX static library libMolAlign_static.a 3 warnings generated. [ 45%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog_static.dir/MolCatalogParams.cpp.o [ 45%] Built target MolAlign_static In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Renumber.cpp:10: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target testQuery [ 46%] Building CXX object Code/Query/CMakeFiles/testQuery.dir/test.cpp.o Scanning dependencies of target testMatCalc [ 46%] Building CXX object Code/DataManip/MetricMatrixCalc/CMakeFiles/testMatCalc.dir/testMatCalc.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolCatalog/MolCatalogEntry.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/test.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target SLNParse_static Linking CXX executable testMatCalc [ 46%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse_static.dir/SLNParse.cpp.o [ 46%] Built target testMatCalc Scanning dependencies of target hc [ 47%] Building C object Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/hc.c.o [ 47%] Building C object Code/ML/Cluster/Murtagh/CMakeFiles/hc.dir/hcdriver.c.o Linking C shared library ../../../../lib/libhc.dylib [ 47%] Built target hc [ 47%] In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SLNParse/SLNParse.cpp:36: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse_static.dir/SLNAttribs.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SLNParse/SLNAttribs.cpp:37: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SLNParse/SLNAttribs.h:39: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX static library libShapeHelpers_static.a 3 warnings generated. Linking CXX static library libMolChemicalFeatures_static.a [ 47%] 3 warnings generated. Built target ShapeHelpers_static [ 47%] Built target MolChemicalFeatures_static [ 47%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse_static.dir/sln.tab.cpp.o Linking CXX executable testQuery [ 47%] Built target testQuery [ 48%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse_static.dir/lex.yysln.cpp.o 3 warnings generated. Linking CXX static library libForceFieldHelpers_static.a [ 48%] Built target ForceFieldHelpers_static 3 warnings generated. Scanning dependencies of target SimDivPickers_static Linking CXX static library libGraphMol_static.a [ 48%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers_static.dir/DistPicker.cpp.o 3 warnings generated. Linking CXX static library libMolCatalog_static.a In file included from sln.ll:48: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 48%] Built target MolCatalog_static [ 48%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers_static.dir/MaxMinPicker.cpp.o In file included from sln.yy:46: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 48%] Built target GraphMol_static [ 49%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers_static.dir/HierarchicalClusterPicker.cpp.o Scanning dependencies of target Clustering [ 50%] Building CXX object Code/ML/Cluster/Murtagh/CMakeFiles/Clustering.dir/Clustering.cpp.o Scanning dependencies of target hc_static [ 50%] Building C object Code/ML/Cluster/Murtagh/CMakeFiles/hc_static.dir/hc.c.o [ 50%] Building C object Code/ML/Cluster/Murtagh/CMakeFiles/hc_static.dir/hcdriver.c.o Linking C static library libhc_static.a [ 50%] Built target hc_static Scanning dependencies of target InfoTheory [ 51%] Building CXX object Code/ML/InfoTheory/CMakeFiles/InfoTheory.dir/InfoBitRanker.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/MaxMinPicker.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/MaxMinPicker.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/Cluster/Murtagh/Clustering.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target ChemicalFeatures 3 warnings generated. Linking CXX static library libSimDivPickers_static.a 3 warnings generated. 3 warnings generated. [ 51%] Built target SimDivPickers_static [ 51%] Building CXX object Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures.dir/FreeChemicalFeature.cpp.o 3 warnings generated. Scanning dependencies of target DataStructs Scanning dependencies of target ChemicalFeatures_static [ 51%] Linking CXX static library libInfoTheory.a Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitVect.cpp.o [ 51%] Building CXX object Code/ChemicalFeatures/CMakeFiles/ChemicalFeatures_static.dir/FreeChemicalFeature.cpp.o Scanning dependencies of target rdBase Scanning dependencies of target testDict [ 51%] Built target InfoTheory [ 51%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/SparseBitVect.cpp.o [ 52%] Building CXX object Code/RDBoost/Wrap/CMakeFiles/rdBase.dir/RDBase.cpp.o [ 52%] Building CXX object Code/RDGeneral/CMakeFiles/testDict.dir/testDict.cpp.o 3 warnings generated. Linking CXX static library libSLNParse_static.a In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap/RDBase.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ChemicalFeatures/FreeChemicalFeature.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ChemicalFeatures/FreeChemicalFeature.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/Cluster/Murtagh/Clustering.cpp:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ [ 52%] Built target SLNParse_static In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ChemicalFeatures/FreeChemicalFeature.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ChemicalFeatures/FreeChemicalFeature.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 52%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/ExplicitBitVect.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/testDict.cpp:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 4 warnings generated. Linking CXX shared module ../../../../rdkit/ML/Cluster/Clustering.so Scanning dependencies of target testMatrices 3 warnings generated. Linking CXX shared library ../../lib/libChemicalFeatures.dylib [ 52%] Built target ChemicalFeatures [ 52%] Building CXX object Code/Numerics/CMakeFiles/testMatrices.dir/testMatrices.cpp.o [ 52%] Built target Clustering Scanning dependencies of target EigenSolvers Scanning dependencies of target cQuantize 3 warnings generated. Scanning dependencies of target SimDivPickers Linking CXX static library libChemicalFeatures_static.a [ 52%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/Utils.cpp.o 3 warnings generated. Linking CXX executable testDict [ 53%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/base64.cpp.o [ 54%] [ 54%] Building CXX object Code/ML/Data/CMakeFiles/cQuantize.dir/cQuantize.cpp.o [ 54%] Building CXX object Code/Numerics/EigenSolvers/CMakeFiles/EigenSolvers.dir/PowerEigenSolver.cpp.o Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/DistPicker.cpp.o [ 54%] [ 54%] Built target ChemicalFeatures_static Built target testDict [ 54%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/BitOps.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/testMatrices.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target testChemicalFeatures [ 54%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/MaxMinPicker.cpp.o [ 54%] Building CXX object Code/ChemicalFeatures/CMakeFiles/testChemicalFeatures.dir/testChemicalFeatures.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/Data/cQuantize.cpp:10: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 54%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteDistMat.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/EigenSolvers/PowerEigenSolver.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/EigenSolvers/PowerEigenSolver.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteDistMat.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteDistMat.h:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.h:13: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/MaxMinPicker.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/MaxMinPicker.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ChemicalFeatures/testChemicalFeatures.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ChemicalFeatures/FreeChemicalFeature.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 54%] Building CXX object Code/SimDivPickers/CMakeFiles/SimDivPickers.dir/HierarchicalClusterPicker.cpp.o [ 54%] Building CXX object Code/DataStructs/CMakeFiles/DataStructs.dir/DiscreteValueVect.cpp.o 3 warnings generated. Linking CXX executable testMatrices [ 54%] Built target testMatrices In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.h:13: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/Data/cQuantize.cpp:15: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/oldnumeric.h:1: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 3 warnings generated. Linking CXX shared library ../../../lib/libEigenSolvers.dylib 3 warnings generated. 3 warnings generated. Linking CXX executable testChemicalFeatures [ 54%] Built target EigenSolvers [ 54%] Built target testChemicalFeatures 4 warnings generated. Linking CXX shared module ../../../rdkit/ML/Data/cQuantize.so [ 54%] Built target cQuantize 3 warnings generated. Linking CXX shared library ../../lib/libSimDivPickers.dylib Linking CXX shared library ../../lib/libDataStructs.dylib [ 54%] Built target SimDivPickers [ 54%] Built target DataStructs Scanning dependencies of target testDataStructs [ 54%] Building CXX object Code/DataStructs/CMakeFiles/testDataStructs.dir/testDatastructs.cpp.o Scanning dependencies of target rdMetricMatrixCalc [ 54%] Building CXX object Code/DataManip/MetricMatrixCalc/Wrap/CMakeFiles/rdMetricMatrixCalc.dir/rdMetricMatrixCalc.cpp.o Scanning dependencies of target rdInfoTheory Scanning dependencies of target rdSimDivPickers [ 55%] [ 55%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/InfoBitRanker.cpp.o Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/BitCorrMatGenerator.cpp.o Scanning dependencies of target RDGeometryLib [ 56%] Scanning dependencies of target cDataStructs Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/MaxMinPicker.cpp.o [ 56%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/point.cpp.o [ 56%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DataStructs.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/testDatastructs.cpp:21: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.h:13: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/InfoTheory/Wrap/BitCorrMatGenerator.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/Wrap/DataStructs.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataManip/MetricMatrixCalc/Wrap/rdMetricMatrixCalc.cpp:14: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/InfoTheory/Wrap/BitCorrMatGenerator.cpp:15: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/InfoTheory/Wrap/InfoBitRanker.cpp:14: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/Wrap/MaxMinPicker.cpp:16: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/oldnumeric.h:1: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 3 warnings generated. [ 56%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform2D.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/Wrap/DataStructs.cpp:20: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 4 warnings generated. 4 warnings generated. [ 56%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/HierarchicalClusterPicker.cpp.o Linking CXX shared module ../../../../rdkit/DataManip/Metric/rdMetricMatrixCalc.so 4 warnings generated. [ 57%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/DiscreteValueVect.cpp.o [ 57%] Built target rdMetricMatrixCalc [ 57%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/Transform3D.cpp.o 4 warnings generated. [ 57%] Building CXX object Code/ML/InfoTheory/Wrap/CMakeFiles/rdInfoTheory.dir/rdInfoTheory.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/Wrap/DiscreteValueVect.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform2D.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform2D.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/InfoTheory/Wrap/rdInfoTheory.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable testDataStructs 3 warnings generated. Linking CXX shared module ../../../rdkit/rdBase.so [ 57%] Built target testDataStructs [ 57%] Building CXX object Code/SimDivPickers/Wrap/CMakeFiles/rdSimDivPickers.dir/rdSimDivPickers.cpp.o [ 57%] Built target rdBase [ 57%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/SparseIntVect.cpp.o 4 warnings generated. [ 58%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/UniformGrid3D.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/Wrap/SparseIntVect.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 58%] Building CXX object Code/Geometry/CMakeFiles/RDGeometryLib.dir/GridUtils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/Wrap/HierarchicalClusterPicker.cpp:16: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/oldnumeric.h:1: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/UniformGrid3D.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/UniformGrid3D.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ML/InfoTheory/Wrap/rdInfoTheory.cpp:12: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/oldnumeric.h:1: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 3 warnings generated. 4 warnings generated. [ 58%] [ 58%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_SparseBV.cpp.o Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_ExplicitBV.cpp.o 3 warnings generated. [ 58%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_BitOps.cpp.o 4 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/GridUtils.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/UniformGrid3D.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Linking CXX shared module ../../../../rdkit/ML/InfoTheory/rdInfoTheory.so [ 58%] Built target rdInfoTheory [ 59%] Building CXX object Code/DataStructs/Wrap/CMakeFiles/cDataStructs.dir/wrap_Utils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/Wrap/wrap_SparseBV.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/Wrap/wrap_ExplicitBV.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/SimDivPickers/Wrap/rdSimDivPickers.cpp:13: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/oldnumeric.h:1: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 4 warnings generated. Linking CXX shared module ../../../rdkit/SimDivFilters/rdSimDivPickers.so [ 59%] Built target rdSimDivPickers In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/Wrap/wrap_BitOps.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/Wrap/wrap_Utils.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. Linking CXX shared library ../../lib/libRDGeometryLib.dylib [ 59%] Built target RDGeometryLib Scanning dependencies of target testTransforms Scanning dependencies of target testGrid [ 59%] [ 59%] Building CXX object Code/Geometry/CMakeFiles/testTransforms.dir/testTransforms.cpp.o Building CXX object Code/Geometry/CMakeFiles/testGrid.dir/testGrid.cpp.o 3 warnings generated. Scanning dependencies of target rdGeometry 3 warnings generated. 3 warnings generated. [ 59%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/Point.cpp.o Scanning dependencies of target Optimizer [ 59%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/BFGSOpt.cpp.o Scanning dependencies of target Alignment [ 59%] Building CXX object Code/Numerics/Alignment/CMakeFiles/Alignment.dir/AlignPoints.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/testGrid.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/UniformGrid3D.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 59%] In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/testTransforms.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Building CXX object Code/Numerics/Optimizer/CMakeFiles/Optimizer.dir/LinearSearch.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Wrap/Point.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Linking CXX shared library ../../../lib/libOptimizer.dylib [ 59%] Built target Optimizer [ 59%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/UniformGrid3D.cpp.o Scanning dependencies of target GraphMol In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Alignment/AlignPoints.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Alignment/AlignPoints.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Wrap/UniformGrid3D.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 59%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Atom.cpp.o 3 warnings generated. Linking CXX executable testGrid [ 59%] Built target testGrid [ 59%] Building CXX object Code/Geometry/Wrap/CMakeFiles/rdGeometry.dir/rdGeometry.cpp.o 3 warnings generated. Linking CXX executable testTransforms In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Wrap/rdGeometry.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libAlignment.dylib [ 59%] Built target testTransforms [ 60%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryAtom.cpp.o [ 60%] Built target Alignment [ 60%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryBond.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryBond.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryBond.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryAtom.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryAtom.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Scanning dependencies of target testOptimizer [ 60%] Building CXX object Code/Numerics/Optimizer/CMakeFiles/testOptimizer.dir/testOptimizer.cpp.o Linking CXX executable testOptimizer [ 60%] Built target testOptimizer [ 60%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Bond.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Bond.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Bond.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 60%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolOps.cpp.o 3 warnings generated. [ 60%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/FindRings.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolOps.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. [ 61%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ROMol.cpp.o Linking CXX shared module ../../../rdkit/Geometry/rdGeometry.so [ 61%] Built target rdGeometry [ 61%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RWMol.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FindRings.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target testAlignment [ 61%] Building CXX object Code/Numerics/Alignment/CMakeFiles/testAlignment.dir/testAlignment.cpp.o 3 warnings generated. Linking CXX shared module ../../../rdkit/DataStructs/cDataStructs.so Scanning dependencies of target ForceField [ 61%] Built target cDataStructs [ 61%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/PeriodicTable.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.cpp:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 62%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/ForceField.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RWMol.cpp:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RWMol.h:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Alignment/testAlignment.cpp:10: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Alignment/AlignPoints.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target rdAlignment [ 62%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleBend.cpp.o [ 62%] Building CXX object Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Alignment/Wrap/rdAlignment.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable testAlignment 3 warnings generated. [ 62%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/BondStretch.cpp.o [ 62%] Built target testAlignment [ 62%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/atomic_data.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/AngleBend.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/AngleBend.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/BondStretch.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 62%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/QueryOps.cpp.o 3 warnings generated. [ 62%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Nonbonded.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/Nonbonded.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryOps.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/QueryOps.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 62%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Inversion.cpp.o [ 63%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionAngle.cpp.o 3 warnings generated. [ 63%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/DistanceConstraint.cpp.o 3 warnings generated. [ 64%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolPickler.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Alignment/Wrap/rdAlignment.cpp:14: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/DistanceConstraint.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolPickler.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/Inversion.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/Inversion.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 64%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Canon.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/TorsionAngle.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/TorsionAngle.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Canon.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 64%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AtomIterators.cpp.o 4 warnings generated. Linking CXX shared module ../../../../rdkit/Numerics/rdAlignment.so [ 64%] Built target rdAlignment [ 64%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/AngleConstraint.cpp.o 3 warnings generated. [ 64%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/BondIterators.cpp.o 3 warnings generated. 3 warnings generated. [ 64%] [ 64%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/TorsionConstraint.cpp.o Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Aromaticity.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/AtomIterators.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 64%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/PositionConstraint.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Aromaticity.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/BondIterators.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/BondIterators.h:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/AngleConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/AngleBend.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/TorsionConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/TorsionAngle.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/PositionConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/PositionConstraint.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 64%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Kekulize.cpp.o 3 warnings generated. [ 65%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/UFF/Params.cpp.o 3 warnings generated. [ 65%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleBend.cpp.o 3 warnings generated. [ 66%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/MolDiscriminators.cpp.o 3 warnings generated. [ 66%] In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Kekulize.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/BondStretch.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolDiscriminators.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolOps.h:16: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 66%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/ConjugHybrid.cpp.o 3 warnings generated. [ 66%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/AddHs.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/BondStretch.cpp:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/AddHs.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 66%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/StretchBend.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/Params.cpp:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/StretchBend.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ConjugHybrid.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. [ 66%] [ 66%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RankAtoms.cpp.o Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Matrices.cpp.o 3 warnings generated. [ 66%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/OopBend.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RankAtoms.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 67%] 3 warnings generated. 3 warnings generated. 3 warnings generated. Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Chirality.cpp.o [ 67%] [ 67%] [ 67%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/RingInfo.cpp.o Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Conformer.cpp.o Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionAngle.cpp.o 3 warnings generated. [ 68%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Nonbonded.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Chirality.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/TorsionAngle.cpp:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 68%] Building CXX object Code/GraphMol/CMakeFiles/GraphMol.dir/Renumber.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Matrices.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/OopBend.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/OopBend.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/Nonbonded.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/Nonbonded.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Conformer.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Conformer.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Renumber.cpp:10: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 68%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/DistanceConstraint.cpp.o 3 warnings generated. [ 68%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/AngleConstraint.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/DistanceConstraint.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/AngleBend.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 68%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/TorsionConstraint.cpp.o 3 warnings generated. [ 68%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/PositionConstraint.cpp.o 3 warnings generated. [ 69%] Building CXX object Code/ForceField/CMakeFiles/ForceField.dir/MMFF/Params.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/TorsionConstraint.cpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/round.hpp:14: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. Linking CXX shared library ../../lib/libGraphMol.dylib In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/PositionConstraint.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/PositionConstraint.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/Params.cpp:24: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 69%] Built target GraphMol 3 warnings generated. Scanning dependencies of target PartialCharges [ 69%] Scanning dependencies of target Depictor Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerCharges.cpp.o Scanning dependencies of target SubstructMatch [ 69%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/RDDepictor.cpp.o [ 70%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructMatch.cpp.o 3 warnings generated. [ 70%] Building CXX object Code/GraphMol/PartialCharges/CMakeFiles/PartialCharges.dir/GasteigerParams.cpp.o Scanning dependencies of target Subgraphs [ 70%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/Subgraphs.cpp.o Scanning dependencies of target SmilesParse 3 warnings generated. [ 70%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/SubstructMatch.dir/SubstructUtils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Subgraphs/Subgraphs.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructUtils.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructUtils.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/PartialCharges/GasteigerCharges.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 70%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParse.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Substruct/SubstructMatch.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/RDDepictor.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/RDDepictor.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesParse.cpp:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../lib/libForceField.dylib [ 70%] Built target ForceField [ 70%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/EmbeddedFrag.cpp.o [ 70%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/Subgraphs.dir/SubgraphUtils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/EmbeddedFrag.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Subgraphs/SubgraphUtils.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libPartialCharges.dylib [ 70%] Built target PartialCharges [ 70%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesParseOps.cpp.o 3 warnings generated. 3 warnings generated. [ 70%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmilesWrite.cpp.o 3 warnings generated. Scanning dependencies of target MolTransforms [ 70%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/Depictor.dir/DepictUtils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesParseOps.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libSubstructMatch.dylib [ 70%] Built target SubstructMatch [ 70%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/SmartsWrite.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmilesWrite.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 70%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/MolTransforms.dir/MolTransforms.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/SmartsWrite.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/DepictUtils.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolTransforms/MolTransforms.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolTransforms/MolTransforms.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Linking CXX shared library ../../../lib/libSubgraphs.dylib [ 70%] Built target Subgraphs [ 71%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smarts.tab.cpp.o Scanning dependencies of target DistGeometry [ 71%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistGeomUtils.cpp.o In file included from smarts.yy:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/DistGeomUtils.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/BoundsMatrix.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 71%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/smiles.tab.cpp.o 3 warnings generated. [ 71%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/TriangleSmooth.cpp.o In file included from smiles.yy:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/TriangleSmooth.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/BoundsMatrix.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libDepictor.dylib 3 warnings generated. [ 71%] Built target Depictor [ 72%] Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/DistViolationContrib.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/DistViolationContrib.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/ForceField.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Scanning dependencies of target rdForceField Linking CXX shared library ../../../lib/libMolTransforms.dylib [ 72%] Built target MolTransforms [ 72%] [ 72%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmarts.cpp.o Building CXX object Code/ForceField/Wrap/CMakeFiles/rdForceField.dir/ForceField.cpp.o 3 warnings generated. Scanning dependencies of target graphmolTest1 [ 72%] Building CXX object Code/GraphMol/CMakeFiles/graphmolTest1.dir/test1.cpp.o In file included from smarts.ll:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/Wrap/ForceField.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. [ 72%] [ 72%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/SmilesParse.dir/lex.yysmiles.cpp.o Building CXX object Code/DistGeom/CMakeFiles/DistGeometry.dir/ChiralViolationContrib.cpp.o Scanning dependencies of target rdPartialCharges [ 72%] Building CXX object Code/GraphMol/PartialCharges/Wrap/CMakeFiles/rdPartialCharges.dir/rdPartialCharges.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/test1.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/ChiralViolationContrib.cpp:7: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/ChiralSet.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/PartialCharges/Wrap/rdPartialCharges.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from smiles.ll:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target rdMolTransforms Scanning dependencies of target ShapeHelpers [ 72%] Building CXX object Code/GraphMol/MolTransforms/Wrap/CMakeFiles/rdMolTransforms.dir/rdMolTransforms.cpp.o [ 72%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeEncoder.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../lib/libDistGeometry.dylib [ 72%] Built target DistGeometry [ 72%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/ShapeHelpers.dir/ShapeUtils.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeUtils.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeUtils.h:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DataStructs/DiscreteValueVect.h:13: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/ShapeEncoder.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libSmilesParse.dylib Scanning dependencies of target MolCatalog [ 72%] Built target SmilesParse In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolTransforms/Wrap/rdMolTransforms.cpp:13: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ [ 73%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogEntry.cpp.o 3 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdPartialCharges.so 3 warnings generated. 3 warnings generated. Linking CXX executable graphmolTest1 [ 73%] Built target rdPartialCharges [ 73%] Built target graphmolTest1 [ 73%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/MolCatalog.dir/MolCatalogParams.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolCatalog/MolCatalogEntry.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target SLNParse 3 warnings generated. Linking CXX shared library ../../../lib/libShapeHelpers.dylib [ 73%] Built target ShapeHelpers Scanning dependencies of target rdChemicalFeatures Scanning dependencies of target rdqueries [ 73%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNParse.cpp.o [ 73%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/rdChemicalFeatures.cpp.o 3 warnings generated. Linking CXX shared module ../../../rdkit/ForceField/rdForceField.so [ 73%] Built target rdForceField [ 73%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/rdqueries.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SLNParse/SLNParse.cpp:36: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/rdChemicalFeatures.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target RDInchiLib Scanning dependencies of target ForceFieldHelpers [ 73%] Building CXX object External/INCHI-API/CMakeFiles/RDInchiLib.dir/inchi.cpp.o [ 73%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/AtomTyper.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/rdqueries.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libMolCatalog.dylib [ 73%] Built target MolCatalog [ 73%] Building CXX object Code/ChemicalFeatures/Wrap/CMakeFiles/rdChemicalFeatures.dir/FreeChemicalFeature.cpp.o 4 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdMolTransforms.so [ 73%] Built target rdMolTransforms [ 73%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdqueries.dir/Queries.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/UFF/AtomTyper.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target FileParsers In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ChemicalFeatures/Wrap/FreeChemicalFeature.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 73%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/Mol2FileParser.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/inchi.cpp:58: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/RDDepictor.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/Queries.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/Mol2FileParser.cpp:38: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 73%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/UFF/Builder.cpp.o 3 warnings generated. [ 73%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/AtomTyper.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/UFF/Builder.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/MMFF/AtomTyper.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 74%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/SLNAttribs.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SLNParse/SLNAttribs.cpp:37: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SLNParse/SLNAttribs.h:39: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../lib/libRDInchiLib.dylib [ 74%] Built target RDInchiLib [ 74%] Building CXX object Code/GraphMol/ForceFieldHelpers/CMakeFiles/ForceFieldHelpers.dir/MMFF/Builder.cpp.o Scanning dependencies of target MolAlign [ 74%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/AlignMolecules.cpp.o 3 warnings generated. Linking CXX shared module ../../../rdkit/Chem/rdChemicalFeatures.so In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/MMFF/Builder.cpp:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 74%] Built target rdChemicalFeatures [ 74%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/sln.tab.cpp.o 3 warnings generated. [ 74%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileParser.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/AlignMolecules.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/AlignMolecules.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared module ../../../rdkit/Chem/rdqueries.so [ 74%] Built target rdqueries [ 74%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/MolAlign.dir/O3AAlignMolecules.cpp.o In file included from sln.yy:46: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 74%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/SLNParse.dir/lex.yysln.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileParser.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Scanning dependencies of target testDistGeom In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/O3AAlignMolecules.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/O3AAlignMolecules.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from sln.ll:48: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 75%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileStereochem.cpp.o 3 warnings generated. [ 75%] Building CXX object Code/DistGeom/CMakeFiles/testDistGeom.dir/testDistGeom.cpp.o Scanning dependencies of target DistGeom In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/testDistGeom.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/BoundsMatrix.h:14: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileStereochem.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileStereochem.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 75%] Building CXX object Code/DistGeom/Wrap/CMakeFiles/DistGeom.dir/DistGeom.cpp.o 3 warnings generated. Linking CXX shared library ../../../lib/libForceFieldHelpers.dylib [ 75%] Built target ForceFieldHelpers [ 75%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/MolFileWriter.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/Wrap/DistGeom.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolFileWriter.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. Linking CXX shared library ../../../lib/libSLNParse.dylib Scanning dependencies of target graphmolIterTest 3 warnings generated. Linking CXX executable testDistGeom [ 75%] Built target testDistGeom [ 75%] [ 75%] Building CXX object Code/GraphMol/CMakeFiles/graphmolIterTest.dir/itertest.cpp.o Built target SLNParse [ 75%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ForwardSDMolSupplier.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/DistGeom/Wrap/DistGeom.cpp:15: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ Scanning dependencies of target graphmolcpTest In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/itertest.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 76%] Building CXX object Code/GraphMol/CMakeFiles/graphmolcpTest.dir/cptest.cpp.o 3 warnings generated. 3 warnings generated. Linking CXX shared library ../../../lib/libMolAlign.dylib [ 76%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDMolSupplier.cpp.o [ 76%] Built target MolAlign [ 76%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SDWriter.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/ForwardSDMolSupplier.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SanitException.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/cptest.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Scanning dependencies of target graphmolqueryTest In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/SDMolSupplier.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SanitException.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/SDWriter.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolWriters.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 76%] Building CXX object Code/GraphMol/CMakeFiles/graphmolqueryTest.dir/querytest.cpp.o 4 warnings generated. Linking CXX shared module ../../../rdkit/DistanceGeometry/DistGeom.so 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/querytest.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 76%] Built target DistGeom [ 77%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesMolSupplier.cpp.o 3 warnings generated. Linking CXX executable graphmolIterTest 3 warnings generated. [ 77%] Built target graphmolIterTest [ 77%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/SmilesWriter.cpp.o Scanning dependencies of target graphmoltestCanon [ 77%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestCanon.dir/testCanon.cpp.o 3 warnings generated. Linking CXX executable graphmolcpTest In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/testCanon.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. [ 77%] Built target graphmolcpTest [ 77%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTMolSupplier.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/SmilesMolSupplier.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolSupplier.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target ChemTransforms In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/SmilesWriter.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolWriters.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 78%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/ChemTransforms.cpp.o Scanning dependencies of target smiTest1 Scanning dependencies of target smaTest1 [ 79%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smiTest1.dir/test.cpp.o [ 79%] Building CXX object Code/GraphMol/SmilesParse/CMakeFiles/smaTest1.dir/smatest.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/test.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SmilesParse/smatest.cpp:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/TDTMolSupplier.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolSupplier.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemTransforms/ChemTransforms.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable graphmolqueryTest [ 79%] Built target graphmolqueryTest [ 79%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TDTWriter.cpp.o 3 warnings generated. [ 79%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/ChemTransforms.dir/MolFragmenter.cpp.o 3 warnings generated. 3 warnings generated. Linking CXX executable graphmoltestCanon [ 79%] Built target graphmoltestCanon [ 79%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileParser.cpp.o Scanning dependencies of target testSubgraphs1 In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemTransforms/MolFragmenter.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemTransforms/MolFragmenter.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/TDTWriter.cpp:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolWriters.h:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 79%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs1.dir/test1.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/TplFileParser.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Subgraphs/test1.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target testSubgraphs2 [ 80%] Building CXX object Code/GraphMol/Subgraphs/CMakeFiles/testSubgraphs2.dir/test2.cpp.o 3 warnings generated. [ 80%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/TplFileWriter.cpp.o 3 warnings generated. Linking CXX executable smaTest1 [ 80%] Built target smaTest1 [ 81%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBParser.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Subgraphs/test2.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/TplFileWriter.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/PDBParser.cpp:18: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/FileParsers.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. Linking CXX shared library ../../../lib/libChemTransforms.dylib [ 81%] Built target ChemTransforms [ 81%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBWriter.cpp.o Scanning dependencies of target FragCatalog 3 warnings generated. [ 82%] Linking CXX executable smiTest1 Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogUtils.cpp.o [ 82%] Built target smiTest1 [ 82%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/PDBSupplier.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/PDBWriter.cpp:16: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target Fingerprints 3 warnings generated. Linking CXX executable testSubgraphs1 3 warnings generated. 3 warnings generated. [ 82%] Linking CXX executable testSubgraphs2 Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatGenerator.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogUtils.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogUtils.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 82%] [ 82%] Built target testSubgraphs2 Built target testSubgraphs1 [ 82%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/FileParsers.dir/ProximityBonds.cpp.o [ 83%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/Fingerprints.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/PDBSupplier.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/MolSupplier.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Catalogs/Catalog.h:16: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 83%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatalogEntry.cpp.o Scanning dependencies of target rdForceFieldHelpers In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/Fingerprints.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogEntry.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatalogEntry.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatParams.h:16: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 83%] Building CXX object Code/GraphMol/ForceFieldHelpers/Wrap/CMakeFiles/rdForceFieldHelpers.dir/rdForceFields.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/ProximityBonds.cpp:10: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/ProximityBonds.h:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RWMol.h:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/Wrap/rdForceFields.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.cpp:12: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:10:9: warning: '_RD_FRAG_CAT_GENERATOR_H_' is used as a header guard here, followed by #define of a different macro [-Wheader-guard] #ifndef _RD_FRAG_CAT_GENERATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:11:9: note: '_RD_FRAG_CAT_GENRATOR_H_' is defined here; did you mean '_RD_FRAG_CAT_GENERATOR_H_'? #define _RD_FRAG_CAT_GENRATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~ _RD_FRAG_CAT_GENERATOR_H_ 3 warnings generated. [ 83%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/PatternFingerprints.cpp.o 3 warnings generated. [ 83%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragCatParams.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/PatternFingerprints.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatParams.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatParams.h:16: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libFileParsers.dylib 4 warnings generated. [ 83%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/FragCatalog.dir/FragFPGenerator.cpp.o 3 warnings generated. [ 83%] Built target FileParsers [ 83%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MorganFingerprints.cpp.o 3 warnings generated. 3 warnings generated. [ 83%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/AtomPairs.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragFPGenerator.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Catalogs/Catalog.h:16: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/MorganFingerprints.cpp:36: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/AtomPairs.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target MolChemicalFeatures [ 83%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeature.cpp.o Scanning dependencies of target rdShapeHelpers In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 83%] Building CXX object Code/GraphMol/ShapeHelpers/Wrap/CMakeFiles/rdShapeHelpers.dir/rdShapeHelpers.cpp.o 3 warnings generated. [ 84%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureDef.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdForceFieldHelpers.so 3 warnings generated. Linking CXX shared library ../../../lib/libFragCatalog.dylib Scanning dependencies of target testMolCatalog In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 84%] Built target rdForceFieldHelpers [ 84%] [ 84%] Built target FragCatalog Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o [ 85%] Building CXX object Code/GraphMol/MolCatalog/CMakeFiles/testMolCatalog.dir/test1.cpp.o Scanning dependencies of target rdMolCatalog In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolCatalog/test1.cpp:5: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 85%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/Fingerprints.dir/MACCS.cpp.o [ 86%] Building CXX object Code/GraphMol/MolCatalog/Wrap/CMakeFiles/rdMolCatalog.dir/rdMolCatalog.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/Wrap/rdShapeHelpers.cpp:13: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/oldnumeric.h:1: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureFactory.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeature.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target testSLNParse [ 86%] Building CXX object Code/GraphMol/SLNParse/CMakeFiles/testSLNParse.dir/test.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/MACCS.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.cpp:5: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolCatalog/Wrap/rdMolCatalog.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SLNParse/test.cpp:36: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target rdSLNParse 3 warnings generated. [ 86%] Building CXX object Code/GraphMol/SLNParse/Wrap/CMakeFiles/rdSLNParse.dir/rdSLNParse.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/SLNParse/Wrap/rdSLNParse.cpp:35: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 86%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/MolChemicalFeatures.dir/FeatureParser.cpp.o 3 warnings generated. Linking CXX executable testMolCatalog Scanning dependencies of target rdchem 4 warnings generated. 3 warnings generated. Linking CXX shared library ../../../lib/libFingerprints.dylib Linking CXX shared module ../../../../rdkit/Chem/rdShapeHelpers.so In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/FeatureParser.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/FeatureParser.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/MolChemicalFeatureDef.h:16: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 86%] Built target Fingerprints [ 86%] Built target rdShapeHelpers [ 86%] Built target testMolCatalog [ 86%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/rdchem.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/rdchem.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target rdmolops [ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/rdmolops.cpp.o Scanning dependencies of target Descriptors [ 87%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Crippen.cpp.o Scanning dependencies of target rdmolfiles In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/rdmolops.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdMolCatalog.so [ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/rdmolfiles.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/Crippen.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable testSLNParse 3 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdSLNParse.so [ 87%] Built target rdMolCatalog [ 87%] [ 87%] [ 87%] Built target rdSLNParse Built target testSLNParse [ 87%] [ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Table.cpp.o Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolops.dir/MolOps.cpp.o Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolDescriptors.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/rdmolfiles.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/MolDescriptors.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/rdmolops.cpp:15: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/oldnumeric.h:1: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/MolOps.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/Table.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libMolChemicalFeatures.dylib [ 87%] Built target MolChemicalFeatures [ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/ForwardSDMolSupplier.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/ForwardSDMolSupplier.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/rdchem.cpp:15: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/oldnumeric.h:1: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/MolOps.cpp:14: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ 3 warnings generated. 4 warnings generated. [ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Atom.cpp.o 3 warnings generated. [ 87%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MolSurf.cpp.o 4 warnings generated. [ 87%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDMolSupplier.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/MolSurf.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/Atom.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target rdinchi [ 87%] Building CXX object External/INCHI-API/Wrap/CMakeFiles/rdinchi.dir/pyInchi.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/SDMolSupplier.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/Wrap/pyInchi.cpp:33: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 88%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/Lipinski.cpp.o 3 warnings generated. [ 89%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Bond.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/Lipinski.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 89%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/ConnectivityDescriptors.cpp.o 3 warnings generated. [ 90%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTMolSupplier.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/Bond.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/ConnectivityDescriptors.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/GraphMol.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ROMol.h:24: In file included from /sw/include/boost-1_53/boost/graph/adjacency_list.hpp:36: In file included from /sw/include/boost-1_53/boost/property_map/property_map.hpp:844: In file included from /sw/include/boost-1_53/boost/property_map/vector_property_map.hpp:14: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/TDTMolSupplier.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared module ../../../rdkit/Chem/rdinchi.so 3 warnings generated. [ 90%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/Descriptors.dir/MQN.cpp.o [ 90%] Built target rdinchi [ 90%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Mol.cpp.o 3 warnings generated. 3 warnings generated. [ 90%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/Conformer.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/MQN.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/Mol.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/Conformer.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target testUFFForceField [ 90%] Building CXX object Code/ForceField/UFF/CMakeFiles/testUFFForceField.dir/testUFFForceField.cpp.o Scanning dependencies of target DistGeomHelpers [ 91%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/BoundsMatrixBuilder.cpp.o 4 warnings generated. Linking CXX shared module ../../../rdkit/Chem/rdmolops.so In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/DistGeomHelpers/BoundsMatrixBuilder.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 91%] Built target rdmolops [ 91%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesMolSupplier.cpp.o 3 warnings generated. [ 91%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/RingInfo.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/UFF/testUFFForceField.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. [ 91%] Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/DistGeomHelpers.dir/Embedder.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/SmilesMolSupplier.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libDescriptors.dylib [ 91%] Built target Descriptors [ 91%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/EditableMol.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/RingInfo.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/EditableMol.cpp:16: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/DistGeomHelpers/Embedder.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/DistGeomHelpers/Embedder.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable testUFFForceField 3 warnings generated. [ 91%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SmilesWriter.cpp.o 3 warnings generated. [ 91%] Built target testUFFForceField [ 92%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdchem.dir/MonomerInfo.cpp.o Scanning dependencies of target graphmolMolOpsTest In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/SmilesWriter.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX shared library ../../../lib/libDistGeomHelpers.dylib In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/MonomerInfo.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 92%] [ 92%] Built target DistGeomHelpers Building CXX object Code/GraphMol/CMakeFiles/graphmolMolOpsTest.dir/molopstest.cpp.o Scanning dependencies of target graphmoltestChirality 3 warnings generated. 3 warnings generated. [ 92%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/SDWriter.cpp.o 3 warnings generated. [ 92%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestChirality.dir/testChirality.cpp.o 3 warnings generated. [ 92%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/TDTWriter.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/molopstest.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target testDepictor Scanning dependencies of target graphmoltestPickler In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/SDWriter.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/testChirality.cpp:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 93%] Building CXX object Code/GraphMol/Depictor/CMakeFiles/testDepictor.dir/testDepictor.cpp.o [ 93%] Building CXX object Code/GraphMol/CMakeFiles/graphmoltestPickler.dir/testPickler.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/testDepictor.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/TDTWriter.cpp:13: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/testPickler.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. Linking CXX shared module ../../../rdkit/Chem/rdchem.so [ 93%] Built target rdchem [ 93%] Building CXX object Code/GraphMol/Wrap/CMakeFiles/rdmolfiles.dir/PDBWriter.cpp.o Scanning dependencies of target rdDepictor [ 93%] Building CXX object Code/GraphMol/Depictor/Wrap/CMakeFiles/rdDepictor.dir/rdDepictor.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Wrap/PDBWriter.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable testDepictor [ 93%] Built target testDepictor 3 warnings generated. Scanning dependencies of target fileParsersTest1 3 warnings generated. Linking CXX executable graphmoltestChirality [ 93%] Built target graphmoltestChirality [ 93%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/fileParsersTest1.dir/test1.cpp.o 3 warnings generated. 3 warnings generated. Linking CXX executable graphmoltestPickler [ 93%] Built target graphmoltestPickler Scanning dependencies of target testMol2ToMol [ 93%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMol2ToMol.dir/testMol2ToMol.cpp.o Scanning dependencies of target testMolSupplier In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/test1.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Depictor/Wrap/rdDepictor.cpp:14: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/oldnumeric.h:1: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ Scanning dependencies of target testMolWriter Scanning dependencies of target testTplParser In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/testMol2ToMol.cpp:36: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 93%] [ 93%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolSupplier.dir/testMolSupplier.cpp.o Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testMolWriter.dir/testMolWriter.cpp.o [ 93%] Building CXX object Code/GraphMol/FileParsers/CMakeFiles/testTplParser.dir/testTpls.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/testMolWriter.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/testMolSupplier.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FileParsers/testTpls.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 3 warnings generated. Linking CXX executable graphmolMolOpsTest Linking CXX shared module ../../../rdkit/Chem/rdmolfiles.so [ 93%] Built target graphmolMolOpsTest [ 93%] Built target rdmolfiles Scanning dependencies of target testSubstructMatch [ 93%] Building CXX object Code/GraphMol/Substruct/CMakeFiles/testSubstructMatch.dir/test1.cpp.o Scanning dependencies of target ChemReactions 4 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdDepictor.so 3 warnings generated. Linking CXX executable testMol2ToMol In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Substruct/test1.cpp:17: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 93%] [ 93%] Built target rdDepictor Built target testMol2ToMol [ 93%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/Reaction.cpp.o 3 warnings generated. Linking CXX executable testTplParser Scanning dependencies of target testChemTransforms Scanning dependencies of target testFragCatalog In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 93%] Built target testTplParser [ 93%] Building CXX object Code/GraphMol/ChemTransforms/CMakeFiles/testChemTransforms.dir/testChemTransforms.cpp.o [ 93%] Building CXX object Code/GraphMol/FragCatalog/CMakeFiles/testFragCatalog.dir/test1.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/test1.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable testMolWriter [ 93%] Built target testMolWriter [ 93%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/MDLParser.cpp.o 3 warnings generated. Linking CXX executable testMolSupplier [ 93%] Built target testMolSupplier [ 94%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/DaylightParser.cpp.o Scanning dependencies of target rdfragcatalog [ 94%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/rdfragcatalog.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemTransforms/testChemTransforms.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/MDLParser.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/DaylightParser.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/rdfragcatalog.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable fileParsersTest1 3 warnings generated. Linking CXX executable testSubstructMatch [ 94%] Built target fileParsersTest1 [ 94%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionPickler.cpp.o [ 94%] Built target testSubstructMatch [ 94%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatalog.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/test1.cpp:17: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:10:9: warning: '_RD_FRAG_CAT_GENERATOR_H_' is used as a header guard here, followed by #define of a different macro [-Wheader-guard] #ifndef _RD_FRAG_CAT_GENERATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:11:9: note: '_RD_FRAG_CAT_GENRATOR_H_' is defined here; did you mean '_RD_FRAG_CAT_GENERATOR_H_'? #define _RD_FRAG_CAT_GENRATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~ _RD_FRAG_CAT_GENERATOR_H_ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/ReactionPickler.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. 4 warnings generated. Linking CXX executable testFragCatalog [ 94%] Built target testFragCatalog [ 94%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatParams.cpp.o Scanning dependencies of target testDescriptors [ 94%] Building CXX object Code/GraphMol/Descriptors/CMakeFiles/testDescriptors.dir/test.cpp.o 3 warnings generated. [ 94%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragCatGenerator.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target rdMolDescriptors 3 warnings generated. [ 95%] Building CXX object Code/GraphMol/FragCatalog/Wrap/CMakeFiles/rdfragcatalog.dir/FragFPGenerator.cpp.o 3 warnings generated. Linking CXX executable testChemTransforms In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 95%] Built target testChemTransforms [ 95%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionWriter.cpp.o [ 96%] Building CXX object Code/GraphMol/Descriptors/Wrap/CMakeFiles/rdMolDescriptors.dir/rdMolDescriptors.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragFPGenerator.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/test.cpp:20: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/ReactionWriter.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target testFingerprints [ 96%] Building CXX object Code/GraphMol/Fingerprints/CMakeFiles/testFingerprints.dir/test1.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragCatalog.cpp:15: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:10:9: warning: '_RD_FRAG_CAT_GENERATOR_H_' is used as a header guard here, followed by #define of a different macro [-Wheader-guard] #ifndef _RD_FRAG_CAT_GENERATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:11:9: note: '_RD_FRAG_CAT_GENRATOR_H_' is defined here; did you mean '_RD_FRAG_CAT_GENERATOR_H_'? #define _RD_FRAG_CAT_GENRATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~ _RD_FRAG_CAT_GENERATOR_H_ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Fingerprints/test1.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragCatParams.cpp:17: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:10:9: warning: '_RD_FRAG_CAT_GENERATOR_H_' is used as a header guard here, followed by #define of a different macro [-Wheader-guard] #ifndef _RD_FRAG_CAT_GENERATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:11:9: note: '_RD_FRAG_CAT_GENRATOR_H_' is defined here; did you mean '_RD_FRAG_CAT_GENERATOR_H_'? #define _RD_FRAG_CAT_GENRATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~ _RD_FRAG_CAT_GENERATOR_H_ 4 warnings generated. [ 96%] Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/ChemReactions.dir/ReactionDepict.cpp.o 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/Wrap/FragCatGenerator.cpp:14: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:10:9: warning: '_RD_FRAG_CAT_GENERATOR_H_' is used as a header guard here, followed by #define of a different macro [-Wheader-guard] #ifndef _RD_FRAG_CAT_GENERATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~~ /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/FragCatalog/FragCatGenerator.h:11:9: note: '_RD_FRAG_CAT_GENRATOR_H_' is defined here; did you mean '_RD_FRAG_CAT_GENERATOR_H_'? #define _RD_FRAG_CAT_GENRATOR_H_ ^~~~~~~~~~~~~~~~~~~~~~~~ _RD_FRAG_CAT_GENERATOR_H_ Scanning dependencies of target testMolTransforms 4 warnings generated. [ 96%] Building CXX object Code/GraphMol/MolTransforms/CMakeFiles/testMolTransforms.dir/test1.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/ReactionDepict.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Reaction.h:35: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 4 warnings generated. Scanning dependencies of target testMMFFForceFieldHelpers [ 97%] Building CXX object Code/GraphMol/ForceFieldHelpers/MMFF/CMakeFiles/testMMFFForceFieldHelpers.dir/testMMFFHelpers.cpp.o Scanning dependencies of target testUFFForceFieldHelpers In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Descriptors/Wrap/rdMolDescriptors.cpp:14: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ [ 98%] Building CXX object Code/GraphMol/ForceFieldHelpers/UFF/CMakeFiles/testUFFForceFieldHelpers.dir/testUFFHelpers.cpp.o 3 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdfragcatalog.so 3 warnings generated. Linking CXX executable testDescriptors [ 98%] Built target testDescriptors [ 98%] Built target rdfragcatalog In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolTransforms/test1.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Scanning dependencies of target rdDistGeom Scanning dependencies of target testDistGeomHelpers In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/MMFF/testMMFFHelpers.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ForceFieldHelpers/UFF/testUFFHelpers.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 99%] [ 99%] Building CXX object Code/GraphMol/DistGeomHelpers/Wrap/CMakeFiles/rdDistGeom.dir/rdDistGeom.cpp.o Building CXX object Code/GraphMol/DistGeomHelpers/CMakeFiles/testDistGeomHelpers.dir/testDgeomHelpers.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/DistGeomHelpers/testDgeomHelpers.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ 3 warnings generated. /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Linking CXX shared library ../../../lib/libChemReactions.dylib In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:11: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 99%] Built target ChemReactions 3 warnings generated. Linking CXX executable testMolTransforms [ 99%] Built target testMolTransforms Scanning dependencies of target testMolAlign Scanning dependencies of target rdMolAlign [ 99%] Building CXX object Code/GraphMol/MolAlign/CMakeFiles/testMolAlign.dir/testMolAlign.cpp.o [ 99%] Building CXX object Code/GraphMol/MolAlign/Wrap/CMakeFiles/rdMolAlign.dir/rdMolAlign.cpp.o 3 warnings generated. Linking CXX executable testMMFFForceFieldHelpers In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:14: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [ 99%] 3 warnings generated. Built target testMMFFForceFieldHelpers In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/DistGeomHelpers/Wrap/rdDistGeom.cpp:13: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ Linking CXX executable testFingerprints [ 99%] Built target testFingerprints 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/testMolAlign.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/AlignMolecules.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/Transform3D.h:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/SquareMatrix.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Matrix.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Linking CXX executable testUFFForceFieldHelpers [ 99%] Built target testUFFForceFieldHelpers Scanning dependencies of target testFeatures [100%] Building CXX object Code/GraphMol/MolChemicalFeatures/CMakeFiles/testFeatures.dir/testFeatures.cpp.o Scanning dependencies of target rdMolChemicalFeatures Scanning dependencies of target testShapeHelpers [100%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/rdMolChemicalFeatures.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolAlign/Wrap/rdMolAlign.cpp:16: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/arrayobject.h:4: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:17: In file included from /sw/lib/python2.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1761: /sw/lib/python2.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:15:2: warning: "Using deprecated NumPy API, disable it by " "#defining NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-W#warnings] #warning "Using deprecated NumPy API, disable it by " \ ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/rdMolChemicalFeatures.cpp:11: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDBoost/Wrap.h:17: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [100%] Building CXX object Code/GraphMol/ShapeHelpers/CMakeFiles/testShapeHelpers.dir/testShapeHelpers.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/testFeatures.cpp:15: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable testDistGeomHelpers 4 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdMolDescriptors.so [100%] Built target testDistGeomHelpers [100%] [100%] Built target rdMolDescriptors Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeature.cpp.o [100%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/MolChemicalFeatureFactory.cpp.o 4 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdDistGeom.so [100%] Built target rdDistGeom [100%] Building CXX object Code/GraphMol/MolChemicalFeatures/Wrap/CMakeFiles/rdMolChemicalFeatures.dir/ChemicalFeatureUtils.cpp.o In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ShapeHelpers/testShapeHelpers.cpp:12: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/UniformGrid3D.h:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Geometry/point.h:25: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Numerics/Vector.h:14: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeature.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/MolChemicalFeatureFactory.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Linking CXX executable testMolAlign In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/MolChemicalFeatures/Wrap/ChemicalFeatureUtils.cpp:12: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [100%] Built target testMolAlign Scanning dependencies of target testInchi [100%] Building CXX object External/INCHI-API/CMakeFiles/testInchi.dir/test.cpp.o 3 warnings generated. Linking CXX executable testShapeHelpers [100%] Built target testShapeHelpers 3 warnings generated. Linking CXX executable testFeatures [100%] Built target testFeatures Scanning dependencies of target testMMFFForceField Scanning dependencies of target testReaction 4 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdMolAlign.so 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/External/INCHI-API/test.cpp:10: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [100%] Built target rdMolAlign [100%] [100%] Building CXX object Code/ForceField/MMFF/CMakeFiles/testMMFFForceField.dir/testMMFFForceField.cpp.o Building CXX object Code/GraphMol/ChemReactions/CMakeFiles/testReaction.dir/testReaction.cpp.o Scanning dependencies of target rdChemReactions In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/ForceField/MMFF/testMMFFForceField.cpp:13: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/RDKitBase.h:22: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/Atom.h:23: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/QueryObjects.h:19: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/Query/Query.h:19: In file included from /sw/include/boost-1_53/boost/smart_ptr.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ [100%] Building CXX object Code/GraphMol/ChemReactions/Wrap/CMakeFiles/rdChemReactions.dir/rdChemReactions.cpp.o 3 warnings generated. 3 warnings generated. 3 warnings generated. In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/testReaction.cpp:33: In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/RDGeneral/utils.h:17: In file included from /sw/include/boost-1_53/boost/random.hpp:52: In file included from /sw/include/boost-1_53/boost/random/generate_canonical.hpp:22: In file included from /sw/include/boost-1_53/boost/math/special_functions.hpp:15: In file included from /sw/include/boost-1_53/boost/math/special_functions/airy.hpp:10: In file included from /sw/include/boost-1_53/boost/math/special_functions/bessel.hpp:17: In file included from /sw/include/boost-1_53/boost/math/special_functions/detail/bessel_jy.hpp:14: In file included from /sw/include/boost-1_53/boost/math/special_functions/gamma.hpp:32: In file included from /sw/include/boost-1_53/boost/math/policies/error_handling.hpp:31: In file included from /sw/include/boost-1_53/boost/format.hpp:38: In file included from /sw/include/boost-1_53/boost/format/internals.hpp:23: In file included from /sw/include/boost-1_53/boost/format/alt_sstream.hpp:21: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ Linking CXX shared module ../../../../rdkit/Chem/rdMolChemicalFeatures.so In file included from /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/Code/GraphMol/ChemReactions/Wrap/rdChemReactions.cpp:32: In file included from /sw/include/boost-1_53/boost/python.hpp:11: In file included from /sw/include/boost-1_53/boost/python/args.hpp:25: In file included from /sw/include/boost-1_53/boost/python/object_core.hpp:14: In file included from /sw/include/boost-1_53/boost/python/call.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/arg_to_python.hpp:15: In file included from /sw/include/boost-1_53/boost/python/converter/shared_ptr_to_python.hpp:10: In file included from /sw/include/boost-1_53/boost/shared_ptr.hpp:17: /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:491:41: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr( std::unique_ptr< Y, D > && r ): px( r.get() ), pn() ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:556:51: warning: rvalue references are a C++11 extension [-Wc++11-extensions] shared_ptr & operator=( std::unique_ptr && r ) ^ /sw/include/boost-1_53/boost/smart_ptr/shared_ptr.hpp:558:55: warning: rvalue references are a C++11 extension [-Wc++11-extensions] this_type( static_cast< std::unique_ptr && >( r ) ).swap(*this); ^ 3 warnings generated. Linking CXX executable testInchi [100%] Built target testInchi [100%] Built target rdMolChemicalFeatures 3 warnings generated. Linking CXX shared module ../../../../rdkit/Chem/rdChemReactions.so [100%] Built target rdChemReactions 3 warnings generated. Linking CXX executable testMMFFForceField [100%] Built target testMMFFForceField 3 warnings generated. Linking CXX executable testReaction [100%] Built target testReaction Install the project... -- Install configuration: "Release" -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/rdkit-targets.cmake -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/rdkit-targets-release.cmake -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/rdkit-config.cmake -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/rdkit-config-version.cmake -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libInchi.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libInchi.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libInchi.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libInchi_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libInchi.2014.03.1.dylib -- Up-to-date: 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-- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libRDGeometryLib.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libRDGeometryLib.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libRDGeometryLib_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Geometry/rdGeometry.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libAlignment.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libAlignment.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libAlignment.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libAlignment_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Numerics/rdAlignment.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libEigenSolvers.2014.03.1.dylib -- Installing: 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/sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libSubgraphs_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libFragCatalog.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libFragCatalog.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libFragCatalog.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libFragCatalog_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdfragcatalog.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libDescriptors.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libDescriptors.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libDescriptors.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libDescriptors_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdMolDescriptors.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libFingerprints.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libFingerprints.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libFingerprints.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libFingerprints_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libPartialCharges.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libPartialCharges.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libPartialCharges.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libPartialCharges_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdPartialCharges.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolTransforms.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolTransforms.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolTransforms.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolTransforms_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdMolTransforms.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libForceFieldHelpers.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libForceFieldHelpers.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libForceFieldHelpers.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libForceFieldHelpers_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdForceFieldHelpers.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libDistGeomHelpers.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libDistGeomHelpers.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libDistGeomHelpers.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libDistGeomHelpers_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdDistGeom.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolAlign.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolAlign.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolAlign.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolAlign_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdMolAlign.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolChemicalFeatures.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolChemicalFeatures.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolChemicalFeatures.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolChemicalFeatures_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdMolChemicalFeatures.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libShapeHelpers.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libShapeHelpers.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libShapeHelpers.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libShapeHelpers_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdShapeHelpers.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolCatalog.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolCatalog.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolCatalog.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libMolCatalog_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdMolCatalog.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libSLNParse.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libSLNParse.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libSLNParse.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libSLNParse_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdSLNParse.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdchem.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdmolops.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdqueries.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdmolfiles.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/DataManip/Metric/rdMetricMatrixCalc.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libSimDivPickers.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libSimDivPickers.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libSimDivPickers.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libSimDivPickers_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/SimDivFilters/rdSimDivPickers.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libhc.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libhc.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libhc.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libhc_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/ML/Cluster/Clustering.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/ML/InfoTheory/rdInfoTheory.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/ML/Data/cQuantize.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libChemicalFeatures.2014.03.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libChemicalFeatures.1.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libChemicalFeatures.dylib -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/lib/libChemicalFeatures_static.a -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/Chem/rdChemicalFeatures.so -- Installing: /sw/build.build/rdkit-2014.03.1-3/RDKit_2014_03_1/rdkit/RDPaths.py #-DRDK_BUILD_SWIG_WRAPPERS=ON /bin/rm -rf /sw/build.build/root-rdkit-2014.03.1-3 /bin/mkdir -p /sw/build.build/root-rdkit-2014.03.1-3/sw /bin/mkdir -p /sw/build.build/root-rdkit-2014.03.1-3/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-rdkit-2014.03.1-3 sudo -u fink-bld [ENV] sh -c /tmp/fink.fwnw0 /tmp/fink.ZTkrs #!/bin/sh -efv RDBASE=$PWD export RDBASE mkdir -p /sw/build.build/root-rdkit-2014.03.1-3/sw/lib/python2.7/site-packages cd $RDBASE perl -pi -e 's|import Image|from PIL import Image|g' rdkit/sping/PIL/pidPIL.py cp -R rdkit /sw/build.build/root-rdkit-2014.03.1-3/sw/lib/python2.7/site-packages/. mkdir -p /sw/build.build/root-rdkit-2014.03.1-3/sw/lib cp -R lib /sw/build.build/root-rdkit-2014.03.1-3/sw/lib/rdkit mkdir -p /sw/build.build/root-rdkit-2014.03.1-3/sw/include cp -R Code /sw/build.build/root-rdkit-2014.03.1-3/sw/include/rdkit cp -R Contrib/PBF /sw/build.build/root-rdkit-2014.03.1-3/sw/include/rdkit/. cp -R External/AvalonTools /sw/build.build/root-rdkit-2014.03.1-3/sw/include/rdkit/. cp -R External/INCHI-API /sw/build.build/root-rdkit-2014.03.1-3/sw/include/rdkit/. # pymol module is already included in pymol sudo -u fink-bld [ENV] sh -c /tmp/fink.18dGL /bin/rm -f /sw/build.build/root-rdkit-2014.03.1-3/sw/info/dir /sw/build.build/root-rdkit-2014.03.1-3/sw/info/dir.old /sw/build.build/root-rdkit-2014.03.1-3/sw/share/info/dir /sw/build.build/root-rdkit-2014.03.1-3/sw/share/info/dir.old /bin/rm -rf /sw/build.build/root-rdkit-shlibs-2014.03.1-3 /bin/mkdir -p /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw /bin/mkdir -p /sw/build.build/root-rdkit-shlibs-2014.03.1-3/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-rdkit-shlibs-2014.03.1-3 sudo -u fink-bld [ENV] sh -c /tmp/fink.j5Y58 /usr/bin/install -d -m 755 /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/lib/rdkit /bin/mv /sw/build.build/root-rdkit-2014.03.1-3/sw/lib/rdkit/*.2014.03.1.dylib /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/lib/rdkit/ /bin/mv /sw/build.build/root-rdkit-2014.03.1-3/sw/lib/rdkit/*.1.dylib /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/lib/rdkit/ /usr/bin/install -d -m 700 /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/share/doc/rdkit-shlibs /bin/cp -r license.txt /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/share/doc/rdkit-shlibs/ /bin/cp -r README /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/share/doc/rdkit-shlibs/ /bin/chmod -R go=u-w /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/share/doc/rdkit-shlibs /bin/rm -f /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/info/dir /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/info/dir.old /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/share/info/dir /sw/build.build/root-rdkit-shlibs-2014.03.1-3/sw/share/info/dir.old /bin/rm -rf /sw/build.build/root-rdkit-dev-2014.03.1-3 /bin/mkdir -p /sw/build.build/root-rdkit-dev-2014.03.1-3/sw /bin/mkdir -p /sw/build.build/root-rdkit-dev-2014.03.1-3/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-rdkit-dev-2014.03.1-3 sudo -u fink-bld [ENV] sh -c /tmp/fink.8F_3W /usr/bin/install -d -m 755 /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/lib/rdkit /bin/mv /sw/build.build/root-rdkit-2014.03.1-3/sw/lib/rdkit/*.a /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/lib/rdkit/ /usr/bin/install -d -m 755 /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/include/rdkit /bin/mv /sw/build.build/root-rdkit-2014.03.1-3/sw/include/rdkit/* /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/include/rdkit/ /usr/bin/install -d -m 700 /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/share/doc/rdkit-dev /bin/cp -r license.txt /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/share/doc/rdkit-dev/ /bin/cp -r README /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/share/doc/rdkit-dev/ /bin/chmod -R go=u-w /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/share/doc/rdkit-dev /bin/rm -f /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/info/dir /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/info/dir.old /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/share/info/dir /sw/build.build/root-rdkit-dev-2014.03.1-3/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-rdkit-2014.03.1-3 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `rdkit' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/rdkit_2014.03.1-3_darwin-x86_64.deb'. Reverting ownership of install dir to root Writing control file... Creating shlibs files... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-rdkit-shlibs-2014.03.1-3 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `rdkit-shlibs' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/rdkit-shlibs_2014.03.1-3_darwin-x86_64.deb'. Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-rdkit-dev-2014.03.1-3 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `rdkit-dev' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/rdkit-dev_2014.03.1-3_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-rdkit-2014.03.1-3 (Reading database ... 59029 files and directories currently installed.) Removing fink-buildlock-rdkit-2014.03.1-3 ...