printf ' ' | fink --no-use-binary-dist --yes --build-as-nobody rebuild sextractor 2>&1 The package 'sextractor' will be built without being installed. Reading build dependency for sextractor-2.8.6-4... Reading dependency for sextractor-2.8.6-4... Reading build conflict for sextractor-2.8.6-4... The package 'autoconf2.6' will be installed. Reading dependency for autoconf2.6-2.69-3... Reading runtime dependency for autoconf2.6-2.69-3... The package 'automake1.11' will be installed. Reading dependency for automake1.11-1.11.6-7... Reading runtime dependency for automake1.11-1.11.6-7... The package 'fink-package-precedence' will be installed. Reading dependency for fink-package-precedence-0.18-1... Reading runtime dependency for fink-package-precedence-0.18-1... The package 'fftw3' will be installed. Reading dependency for fftw3-3.3.4-2... Reading runtime dependency for fftw3-3.3.4-2... The package 'libtool2' will be installed. Reading dependency for libtool2-2.4.2-3... Reading runtime dependency for libtool2-2.4.2-3... The package 'pkgconfig' will be installed. Reading dependency for pkgconfig-0.28-1... Reading runtime dependency for pkgconfig-0.28-1... The package 'fftw3-shlibs' will be installed. Reading dependency for fftw3-shlibs-3.3.4-2... Reading runtime dependency for fftw3-shlibs-3.3.4-2... The package 'm4' will be installed. Reading dependency for m4-1.4.17-1... Reading runtime dependency for m4-1.4.17-1... The package 'automake1.11-core' will be installed. Reading dependency for automake1.11-core-1.11.6-7... Reading runtime dependency for automake1.11-core-1.11.6-7... The package 'libtool2-shlibs' will be installed. Reading dependency for libtool2-shlibs-2.4.2-3... Reading runtime dependency for libtool2-shlibs-2.4.2-3... The package 'glib2-shlibs' will be installed. Reading dependency for glib2-shlibs-2.22.4-8... Reading runtime dependency for glib2-shlibs-2.22.4-8... The package 'gcc49-shlibs' will be installed. Reading dependency for gcc49-shlibs-4.9.1-1000... Reading runtime dependency for gcc49-shlibs-4.9.1-1000... The package 'libsigsegv2-shlibs' will be installed. Reading dependency for libsigsegv2-shlibs-2.6-5... Reading runtime dependency for libsigsegv2-shlibs-2.6-5... The package 'xdg-base' will be installed. Reading dependency for xdg-base-0.8-2... Reading runtime dependency for xdg-base-0.8-2... The following package will be rebuilt: sextractor The following 14 additional packages will be installed: autoconf2.6 automake1.11 automake1.11-core fftw3 fftw3-shlibs fink-package-precedence gcc49-shlibs glib2-shlibs libsigsegv2-shlibs libtool2 libtool2-shlibs m4 pkgconfig xdg-base Do you want to continue? [Y/n] (assuming default) curl --connect-timeout 30 -f -L -A 'fink/0.37.0' -O http://distfiles.master.finkmirrors.net/distfiles/sextractor-2.8.6.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 0 3900k 0 1204 0 0 746 0 1:29:14 0:00:01 1:29:13 745 22 3900k 22 880k 0 0 388k 0 0:00:10 0:00:02 0:00:08 388k 48 3900k 48 1876k 0 0 452k 0 0:00:08 0:00:04 0:00:04 452k 57 3900k 57 2256k 0 0 527k 0 0:00:07 0:00:04 0:00:03 527k 69 3900k 69 2715k 0 0 513k 0 0:00:07 0:00:05 0:00:02 513k 100 3900k 100 3900k 0 0 634k 0 0:00:06 0:00:06 --:--:-- 859k Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/fink-package-precedence_0.18-1_darwin-x86_64.deb Selecting previously deselected package fink-package-precedence. (Reading database ... 4296 files and directories currently installed.) Unpacking fink-package-precedence (from .../fink-package-precedence_0.18-1_darwin-x86_64.deb) ... Setting up fink-package-precedence (0.18-1) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/languages/gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb Selecting previously deselected package gcc49-shlibs. (Reading database ... 4297 files and directories currently installed.) Unpacking gcc49-shlibs (from .../gcc49-shlibs_4.9.1-1000_darwin-x86_64.deb) ... Setting up gcc49-shlibs (4.9.1-1000) ... Clearing dependency_libs of .la files being installed Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/dists/stable/main/binary-darwin-x86_64/libs/libsigsegv2-shlibs_2.6-5_darwin-x86_64.deb Selecting previously deselected package libsigsegv2-shlibs. (Reading database ... 4342 files and directories currently installed.) Unpacking libsigsegv2-shlibs (from .../libsigsegv2-shlibs_2.6-5_darwin-x86_64.deb) ... Setting up libsigsegv2-shlibs (2.6-5) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/libtool2_2.4.2-3_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/devel/libtool2-shlibs_2.4.2-3_darwin-x86_64.deb Selecting previously deselected package libtool2. (Reading database ... 4351 files and directories currently installed.) Unpacking libtool2 (from .../libtool2_2.4.2-3_darwin-x86_64.deb) ... Selecting previously deselected package libtool2-shlibs. Unpacking libtool2-shlibs (from .../libtool2-shlibs_2.4.2-3_darwin-x86_64.deb) ... Setting up libtool2-shlibs (2.4.2-3) ... Setting up libtool2 (2.4.2-3) ... Clearing dependency_libs of .la files being installed * Libtool: (libtool). Generic shared library support script. install-info(/sw/share/info/libtool.info): creating new section `GNU programming tools' Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/m4_1.4.17-1_darwin-x86_64.deb Selecting previously deselected package m4. (Reading database ... 4440 files and directories currently installed.) Unpacking m4 (from .../m4_1.4.17-1_darwin-x86_64.deb) ... Setting up m4 (1.4.17-1) ... * M4: (m4). A powerful macro processor. Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/xdg-base_0.8-2_darwin-x86_64.deb Selecting previously deselected package xdg-base. (Reading database ... 4451 files and directories currently installed.) Unpacking xdg-base (from .../xdg-base_0.8-2_darwin-x86_64.deb) ... Setting up xdg-base (0.8-2) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/autoconf2.6_2.69-3_darwin-x86_64.deb Selecting previously deselected package autoconf2.6. (Reading database ... 4453 files and directories currently installed.) Unpacking autoconf2.6 (from .../autoconf2.6_2.69-3_darwin-x86_64.deb) ... Setting up autoconf2.6 (2.69-3) ... * Autoconf: (autoconf). Create source code configuration scripts. * Standards: (standards). GNU coding standards. install-info(/sw/share/info/standards.info): creating new section `GNU organization' Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/automake1.11_1.11.6-7_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/devel/automake1.11-core_1.11.6-7_darwin-x86_64.deb Selecting previously deselected package automake1.11. (Reading database ... 4537 files and directories currently installed.) Unpacking automake1.11 (from .../automake1.11_1.11.6-7_darwin-x86_64.deb) ... Selecting previously deselected package automake1.11-core. Unpacking automake1.11-core (from .../automake1.11-core_1.11.6-7_darwin-x86_64.deb) ... Setting up automake1.11-core (1.11.6-7) ... Setting up automake1.11 (1.11.6-7) ... * Automake: (automake). Making GNU standards-compliant Makefiles. Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/fftw3_3.3.4-2_darwin-x86_64.deb /sw/fink/dists/stable/main/binary-darwin-x86_64/sci/fftw3-shlibs_3.3.4-2_darwin-x86_64.deb Selecting previously deselected package fftw3. (Reading database ... 4688 files and directories currently installed.) Unpacking fftw3 (from .../fftw3_3.3.4-2_darwin-x86_64.deb) ... Selecting previously deselected package fftw3-shlibs. Unpacking fftw3-shlibs (from .../fftw3-shlibs_3.3.4-2_darwin-x86_64.deb) ... Setting up fftw3-shlibs (3.3.4-2) ... Setting up fftw3 (3.3.4-2) ... Clearing dependency_libs of .la files being installed * fftw3: (fftw3). FFTW User's Manual. install-info(/sw/share/info/fftw3.info): creating new section `Development' Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/glib2-shlibs_2.22.4-8_darwin-x86_64.deb Selecting previously deselected package glib2-shlibs. (Reading database ... 4873 files and directories currently installed.) Unpacking glib2-shlibs (from .../glib2-shlibs_2.22.4-8_darwin-x86_64.deb) ... Setting up glib2-shlibs (2.22.4-8) ... Reading buildlock packages... All buildlocks accounted for. /sw/bin/dpkg-lockwait -i /sw/fink/debs/pkgconfig_0.28-1_darwin-x86_64.deb Selecting previously deselected package pkgconfig. (Reading database ... 5100 files and directories currently installed.) Unpacking pkgconfig (from .../pkgconfig_0.28-1_darwin-x86_64.deb) ... Setting up pkgconfig (0.28-1) ... Setting runtime build-lock... dpkg-deb -b /sw/build.build/root-fink-buildlock-sextractor-2.8.6-4 /sw/build.build dpkg-deb: building package `fink-buildlock-sextractor-2.8.6-4' in `/sw/build.build/fink-buildlock-sextractor-2.8.6-4_2014.07.31-12.51.36_darwin-x86_64.deb'. Installing build-lock package... /sw/bin/dpkg-lockwait -i /sw/build.build/fink-buildlock-sextractor-2.8.6-4_2014.07.31-12.51.36_darwin-x86_64.deb Selecting previously deselected package fink-buildlock-sextractor-2.8.6-4. (Reading database ... 5113 files and directories currently installed.) Unpacking fink-buildlock-sextractor-2.8.6-4 (from .../fink-buildlock-sextractor-2.8.6-4_2014.07.31-12.51.36_darwin-x86_64.deb) ... Setting up fink-buildlock-sextractor-2.8.6-4 (2014.07.31-12.51.36) ... sudo -u fink-bld [ENV] sh -c /tmp/fink.wUnS6 env LANG=C LC_ALL=C /sw/bin/tar --no-same-owner --no-same-permissions -xvf /sw/src/sextractor-2.8.6.tar.gz sextractor-2.8.6/ sextractor-2.8.6/autoconf/ sextractor-2.8.6/autoconf/config.guess sextractor-2.8.6/autoconf/config.sub sextractor-2.8.6/autoconf/depcomp sextractor-2.8.6/autoconf/install-sh sextractor-2.8.6/autoconf/ltmain.sh sextractor-2.8.6/autoconf/missing sextractor-2.8.6/autoconf/mkinstalldirs sextractor-2.8.6/xsl/ sextractor-2.8.6/xsl/sextractor.xsl sextractor-2.8.6/README sextractor-2.8.6/acx_atlas.m4 sextractor-2.8.6/acx_fftw.m4 sextractor-2.8.6/acx_prog_cc_optim.m4 sextractor-2.8.6/acx_pthread.m4 sextractor-2.8.6/acx_urbi_resolve_dir.m4 sextractor-2.8.6/configure.ac sextractor-2.8.6/aclocal.m4 sextractor-2.8.6/Makefile.am sextractor-2.8.6/Makefile.in sextractor-2.8.6/config.h.in sextractor-2.8.6/sextractor.spec.in sextractor-2.8.6/configure sextractor-2.8.6/AUTHORS sextractor-2.8.6/ChangeLog sextractor-2.8.6/INSTALL sextractor-2.8.6/THANKS sextractor-2.8.6/config/ sextractor-2.8.6/config/tophat_2.0_3x3.conv sextractor-2.8.6/config/tophat_3.0_3x3.conv sextractor-2.8.6/config/gauss_5.0_9x9.conv sextractor-2.8.6/config/default.sex sextractor-2.8.6/config/tophat_1.5_3x3.conv sextractor-2.8.6/config/mexhat_3.0_9x9.conv sextractor-2.8.6/config/mexhat_2.5_7x7.conv sextractor-2.8.6/config/default.param sextractor-2.8.6/config/tophat_2.5_3x3.conv sextractor-2.8.6/config/mexhat_4.0_9x9.conv sextractor-2.8.6/config/tophat_4.0_5x5.conv sextractor-2.8.6/config/default.nnw sextractor-2.8.6/config/tophat_5.0_5x5.conv sextractor-2.8.6/config/default.conv sextractor-2.8.6/config/block_3x3.conv sextractor-2.8.6/config/README sextractor-2.8.6/config/gauss_2.0_3x3.conv sextractor-2.8.6/config/gauss_2.0_5x5.conv sextractor-2.8.6/config/gauss_1.5_3x3.conv sextractor-2.8.6/config/gauss_3.0_5x5.conv sextractor-2.8.6/config/mexhat_5.0_11x11.conv sextractor-2.8.6/config/gauss_3.0_7x7.conv sextractor-2.8.6/config/gauss_2.5_5x5.conv sextractor-2.8.6/config/gauss_4.0_7x7.conv sextractor-2.8.6/config/mexhat_2.0_7x7.conv sextractor-2.8.6/config/mexhat_1.5_5x5.conv sextractor-2.8.6/doc/ sextractor-2.8.6/doc/README.DOC sextractor-2.8.6/doc/Guide2source_extractor.pdf sextractor-2.8.6/doc/sextractor.pdf sextractor-2.8.6/BUGS sextractor-2.8.6/COPYRIGHT sextractor-2.8.6/HISTORY sextractor-2.8.6/man/ sextractor-2.8.6/man/sex.1 sextractor-2.8.6/man/sex.x sextractor-2.8.6/man/Makefile.am sextractor-2.8.6/man/Makefile.in sextractor-2.8.6/man/sex.1.in sextractor-2.8.6/src/ sextractor-2.8.6/src/Makefile.am sextractor-2.8.6/src/Makefile.in sextractor-2.8.6/src/ldactoasc.c sextractor-2.8.6/src/ldactoasc.h sextractor-2.8.6/src/analyse.c sextractor-2.8.6/src/assoc.c sextractor-2.8.6/src/astrom.c sextractor-2.8.6/src/back.c sextractor-2.8.6/src/bpro.c sextractor-2.8.6/src/catout.c sextractor-2.8.6/src/check.c sextractor-2.8.6/src/clean.c sextractor-2.8.6/src/extract.c sextractor-2.8.6/src/fft.c sextractor-2.8.6/src/field.c sextractor-2.8.6/src/filter.c sextractor-2.8.6/src/fitswcs.c sextractor-2.8.6/src/flag.c sextractor-2.8.6/src/graph.c sextractor-2.8.6/src/growth.c sextractor-2.8.6/src/image.c sextractor-2.8.6/src/interpolate.c sextractor-2.8.6/src/main.c sextractor-2.8.6/src/makeit.c sextractor-2.8.6/src/manobjlist.c sextractor-2.8.6/src/misc.c sextractor-2.8.6/src/neurro.c sextractor-2.8.6/src/pattern.c sextractor-2.8.6/src/pc.c sextractor-2.8.6/src/photom.c sextractor-2.8.6/src/plist.c sextractor-2.8.6/src/prefs.c sextractor-2.8.6/src/profit.c sextractor-2.8.6/src/psf.c sextractor-2.8.6/src/readimage.c sextractor-2.8.6/src/refine.c sextractor-2.8.6/src/retina.c sextractor-2.8.6/src/scan.c sextractor-2.8.6/src/som.c sextractor-2.8.6/src/weight.c sextractor-2.8.6/src/winpos.c sextractor-2.8.6/src/xml.c sextractor-2.8.6/src/assoc.h sextractor-2.8.6/src/astrom.h sextractor-2.8.6/src/back.h sextractor-2.8.6/src/bpro.h sextractor-2.8.6/src/check.h sextractor-2.8.6/src/clean.h sextractor-2.8.6/src/define.h sextractor-2.8.6/src/extract.h sextractor-2.8.6/src/fft.h sextractor-2.8.6/src/field.h sextractor-2.8.6/src/filter.h sextractor-2.8.6/src/fitswcs.h sextractor-2.8.6/src/flag.h sextractor-2.8.6/src/globals.h sextractor-2.8.6/src/growth.h sextractor-2.8.6/src/image.h sextractor-2.8.6/src/interpolate.h sextractor-2.8.6/src/key.h sextractor-2.8.6/src/neurro.h sextractor-2.8.6/src/param.h sextractor-2.8.6/src/paramprofit.h sextractor-2.8.6/src/pattern.h sextractor-2.8.6/src/photom.h sextractor-2.8.6/src/plist.h sextractor-2.8.6/src/prefs.h sextractor-2.8.6/src/preflist.h sextractor-2.8.6/src/profit.h sextractor-2.8.6/src/psf.h sextractor-2.8.6/src/retina.h sextractor-2.8.6/src/sexhead1.h sextractor-2.8.6/src/sexhead.h sextractor-2.8.6/src/sexheadsc.h sextractor-2.8.6/src/som.h sextractor-2.8.6/src/threads.h sextractor-2.8.6/src/types.h sextractor-2.8.6/src/wcscelsys.h sextractor-2.8.6/src/weight.h sextractor-2.8.6/src/winpos.h sextractor-2.8.6/src/xml.h sextractor-2.8.6/src/fits/ sextractor-2.8.6/src/fits/Makefile.am sextractor-2.8.6/src/fits/Makefile.in sextractor-2.8.6/src/fits/fitsbody.c sextractor-2.8.6/src/fits/fitscat.c sextractor-2.8.6/src/fits/fitscheck.c sextractor-2.8.6/src/fits/fitscleanup.c sextractor-2.8.6/src/fits/fitsconv.c sextractor-2.8.6/src/fits/fitshead.c sextractor-2.8.6/src/fits/fitskey.c sextractor-2.8.6/src/fits/fitsmisc.c sextractor-2.8.6/src/fits/fitsread.c sextractor-2.8.6/src/fits/fitstab.c sextractor-2.8.6/src/fits/fitsutil.c sextractor-2.8.6/src/fits/fitswrite.c sextractor-2.8.6/src/fits/fitscat_defs.h sextractor-2.8.6/src/fits/fitscat.h sextractor-2.8.6/src/levmar/ sextractor-2.8.6/src/levmar/README sextractor-2.8.6/src/levmar/Makefile.am sextractor-2.8.6/src/levmar/Makefile.in sextractor-2.8.6/src/levmar/Axb.c sextractor-2.8.6/src/levmar/lmbc.c sextractor-2.8.6/src/levmar/lm.c sextractor-2.8.6/src/levmar/lmblec.c sextractor-2.8.6/src/levmar/lmlec.c sextractor-2.8.6/src/levmar/misc.c sextractor-2.8.6/src/levmar/compiler.h sextractor-2.8.6/src/levmar/lm.h sextractor-2.8.6/src/levmar/misc.h sextractor-2.8.6/src/levmar/Axb_core.c sextractor-2.8.6/src/levmar/lmbc_core.c sextractor-2.8.6/src/levmar/lm_core.c sextractor-2.8.6/src/levmar/lmblec_core.c sextractor-2.8.6/src/levmar/lmlec_core.c sextractor-2.8.6/src/levmar/misc_core.c sextractor-2.8.6/src/levmar/LICENSE sextractor-2.8.6/src/levmar/README.txt sextractor-2.8.6/src/levmar/lmdemo.c sextractor-2.8.6/src/wcs/ sextractor-2.8.6/src/wcs/Makefile.am sextractor-2.8.6/src/wcs/Makefile.in sextractor-2.8.6/src/wcs/cel.c sextractor-2.8.6/src/wcs/lin.c sextractor-2.8.6/src/wcs/poly.c sextractor-2.8.6/src/wcs/proj.c sextractor-2.8.6/src/wcs/sph.c sextractor-2.8.6/src/wcs/tnx.c sextractor-2.8.6/src/wcs/wcs.c sextractor-2.8.6/src/wcs/wcstrig.c sextractor-2.8.6/src/wcs/cel.h sextractor-2.8.6/src/wcs/lin.h sextractor-2.8.6/src/wcs/poly.h sextractor-2.8.6/src/wcs/proj.h sextractor-2.8.6/src/wcs/sph.h sextractor-2.8.6/src/wcs/tnx.h sextractor-2.8.6/src/wcs/wcs.h sextractor-2.8.6/src/wcs/wcsmath.h sextractor-2.8.6/src/wcs/wcstrig.h sextractor-2.8.6/tests/ sextractor-2.8.6/tests/Makefile.am sextractor-2.8.6/tests/Makefile.in sextractor-2.8.6/tests/galaxies.fits sextractor-2.8.6/tests/galaxies.weight.fits sextractor-2.8.6/tests/default.psf sextractor-2.8.6/tests/default.sex sextractor-2.8.6/tests/default.param sextractor-2.8.6/tests/default.conv sextractor-2.8.6/tests/efigi1.test sudo -u fink-bld [ENV] sh -c /tmp/fink.uiwkk [ -r /sw/fink/dists/stable/main/finkinfo/sci/sextractor.patch ] sudo -u fink-bld [ENV] sh -c /tmp/fink.GgH81 patch -p1 < /sw/fink/dists/stable/main/finkinfo/sci/sextractor.patch patching file acx_atlas.m4 patching file acx_fftw.m4 patching file src/fft.c patching file src/levmar/lm.h patching file src/pattern.c sudo -u fink-bld [ENV] sh -c /tmp/fink.yxTKO /tmp/fink.WvELm #!/bin/sh -ev autoreconf -fi main::scan_file() called too early to check prototype at /sw/bin/aclocal line 643. configure.ac:60: warning: AC_CACHE_VAL(prog_cc_optim_flags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_prog_cc_optim.m4:14: ACX_PROG_CC_OPTIM is expanded from... configure.ac:60: the top level configure.ac:60: warning: AC_CACHE_VAL(prog_cc_optim_flags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_prog_cc_optim.m4:14: ACX_PROG_CC_OPTIM is expanded from... configure.ac:60: the top level libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, `autoconf'. libtoolize: copying file `autoconf/ltmain.sh' libtoolize: Consider adding `AC_CONFIG_MACRO_DIR([m4])' to configure.ac and libtoolize: rerunning libtoolize, to keep the correct libtool macros in-tree. libtoolize: Consider adding `-I m4' to ACLOCAL_AMFLAGS in Makefile.am. main::scan_file() called too early to check prototype at /sw/bin/aclocal line 643. configure.ac:60: warning: AC_CACHE_VAL(prog_cc_optim_flags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_prog_cc_optim.m4:14: ACX_PROG_CC_OPTIM is expanded from... configure.ac:60: the top level configure.ac:60: warning: AC_CACHE_VAL(prog_cc_optim_flags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_prog_cc_optim.m4:14: ACX_PROG_CC_OPTIM is expanded from... configure.ac:60: the top level configure.ac:60: warning: AC_CACHE_VAL(prog_cc_optim_flags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_prog_cc_optim.m4:14: ACX_PROG_CC_OPTIM is expanded from... configure.ac:60: the top level configure.ac:60: warning: AC_CACHE_VAL(prog_cc_optim_flags, ...): suspicious cache-id, must contain _cv_ to be cached ../../lib/autoconf/general.m4:2031: AC_CACHE_VAL is expanded from... ../../lib/autoconf/general.m4:2052: AC_CACHE_CHECK is expanded from... acx_prog_cc_optim.m4:14: ACX_PROG_CC_OPTIM is expanded from... configure.ac:60: the top level libtoolize -fi libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, `autoconf'. libtoolize: linking file `autoconf/config.guess' libtoolize: linking file `autoconf/config.sub' libtoolize: linking file `autoconf/install-sh' libtoolize: linking file `autoconf/ltmain.sh' libtoolize: Consider adding `AC_CONFIG_MACRO_DIR([m4])' to configure.ac and libtoolize: rerunning libtoolize, to keep the correct libtool macros in-tree. libtoolize: Consider adding `-I m4' to ACLOCAL_AMFLAGS in Makefile.am. ./configure --prefix=/sw --prefix=/sw --with-fftw-incdir=/sw/include --with-fftw=/sw/lib --mandir=/sw/share/man --enable-dependency-tracking checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... autoconf/install-sh -c -d checking for gawk... no checking for mawk... no checking for nawk... no checking for awk... awk checking whether make sets $(MAKE)... yes *********** Configuring: sextractor 2.8.6 (2014-07-31) ********** checking for Linux Intel C compiler mode... no checking for cc... cc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether cc accepts -g... yes checking for cc option to accept ISO C89... none needed checking for style of include used by make... GNU checking dependency style of cc... gcc3 checking for gcc... (cached) cc checking whether we are using the GNU C compiler... (cached) yes checking whether cc accepts -g... (cached) yes checking for cc option to accept ISO C89... (cached) none needed checking dependency style of cc... (cached) gcc3 checking for library containing strerror... none required checking for C compiler optimization flags... -O3 -g -funroll-loops -fomit-frame-pointer -Wall checking build system type... x86_64-apple-darwin13.3.0 checking host system type... x86_64-apple-darwin13.3.0 checking how to print strings... printf checking for a sed that does not truncate output... /usr/bin/sed checking for grep that handles long lines and -e... /usr/bin/grep checking for egrep... /usr/bin/grep -E checking for fgrep... /usr/bin/grep -F checking for ld used by cc... /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld checking if the linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) is GNU ld... no checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm checking the name lister (/usr/bin/nm) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 196608 checking whether the shell understands some XSI constructs... yes checking whether the shell understands "+="... yes checking how to convert x86_64-apple-darwin13.3.0 file names to x86_64-apple-darwin13.3.0 format... func_convert_file_noop checking how to convert x86_64-apple-darwin13.3.0 file names to toolchain format... func_convert_file_noop checking for /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld option to reload object files... -r checking for objdump... no checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... no checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm output from cc object... ok checking for sysroot... no checking for mt... no checking if : is a manifest tool... no checking for dsymutil... dsymutil checking for nmedit... nmedit checking for lipo... lipo checking for otool... otool checking for otool64... no checking for -single_module linker flag... yes checking for -exported_symbols_list linker flag... yes checking for -force_load linker flag... yes checking how to run the C preprocessor... cc -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking for dlfcn.h... yes checking for objdir... .libs checking if cc supports -fno-rtti -fno-exceptions... yes checking for cc option to produce PIC... -fno-common -DPIC checking if cc PIC flag -fno-common -DPIC works... yes checking if cc static flag -static works... no checking if cc supports -c -o file.o... yes checking if cc supports -c -o file.o... (cached) yes checking whether the cc linker (/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... darwin13.3.0 dyld checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... no checking for sin in -lm... yes checking for ANSI C header files... (cached) yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking malloc.h usability... no checking malloc.h presence... no checking for malloc.h... no checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking sys/mman.h usability... yes checking sys/mman.h presence... yes checking for sys/mman.h... yes checking for sys/types.h... (cached) yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking for off_t... yes checking for size_t... yes checking whether struct tm is in sys/time.h or time.h... time.h checking for uid_t in sys/types.h... yes checking for error_at_line... no checking for stdlib.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... yes checking for getpagesize... yes checking for working mmap... yes checking return type of signal handlers... void checking whether lstat correctly handles trailing slash... no checking whether stat accepts an empty string... no checking for strftime... yes checking for atexit... yes checking for getenv... yes checking for memcpy... yes checking for memmove... yes checking for memset... yes checking for mkdir... yes checking for munmap... yes checking for strstr... yes checking for sincos... no checking for logf... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking for gprof profiler mode... no checking static linking... yes checking for multithreading... maximum of 16 thread(s) checking pthread.h usability... yes checking pthread.h presence... yes checking for pthread.h... yes checking for the pthreads library -lpthreads... no checking whether pthreads work without any flags... yes checking for joinable pthread attribute... PTHREAD_CREATE_JOINABLE checking if more special flags are required for pthreads... no checking for cc_r... cc checking /sw/include/fftw3.h usability... yes checking /sw/include/fftw3.h presence... yes checking for /sw/include/fftw3.h... yes checking for fftw_execute in -lfftw3... yes checking for fftw_init_threads in -lfftw3_threads... yes checking Accelerate/Accelerate.h usability... yes checking Accelerate/Accelerate.h presence... yes checking for Accelerate/Accelerate.h... yes *************************************************************** Compile cmdline: cc -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT Link cmdline: cc -static -shared-libgcc -framework vecLib -L/sw/lib -lfftw3_threads -lfftw3 -lm Default XSLT URL: file:///sw/share/sextractor/sextractor.xsl *************************************************************** configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating src/fits/Makefile config.status: creating src/levmar/Makefile config.status: creating src/wcs/Makefile config.status: creating man/Makefile config.status: creating tests/Makefile config.status: creating sextractor.spec config.status: creating man/sex.1 config.status: creating config.h config.status: executing depfiles commands config.status: executing libtool commands make /Applications/Xcode.app/Contents/Developer/usr/bin/make all-recursive Making all in man make[2]: Nothing to be done for `all'. Making all in src Making all in fits cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitsbody.o -MD -MP -MF .deps/fitsbody.Tpo -c -o fitsbody.o fitsbody.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitscat.o -MD -MP -MF .deps/fitscat.Tpo -c -o fitscat.o fitscat.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitscheck.o -MD -MP -MF .deps/fitscheck.Tpo -c -o fitscheck.o fitscheck.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitscleanup.o -MD -MP -MF .deps/fitscleanup.Tpo -c -o fitscleanup.o fitscleanup.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitsconv.o -MD -MP -MF .deps/fitsconv.Tpo -c -o fitsconv.o fitsconv.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitshead.o -MD -MP -MF .deps/fitshead.Tpo -c -o fitshead.o fitshead.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitskey.o -MD -MP -MF .deps/fitskey.Tpo -c -o fitskey.o fitskey.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitsmisc.o -MD -MP -MF .deps/fitsmisc.Tpo -c -o fitsmisc.o fitsmisc.c fitskey.c:949:22: warning: format string is not a string literal (potentially insecure) [-Wformat-security] fprintf(stream, skycattail); ^~~~~~~~~~ mv -f .deps/fitsmisc.Tpo .deps/fitsmisc.Po cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitsread.o -MD -MP -MF .deps/fitsread.Tpo -c -o fitsread.o fitsread.c mv -f .deps/fitsconv.Tpo .deps/fitsconv.Po mv -f .deps/fitscleanup.Tpo .deps/fitscleanup.Po cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitstab.o -MD -MP -MF .deps/fitstab.Tpo -c -o fitstab.o fitstab.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitsutil.o -MD -MP -MF .deps/fitsutil.Tpo -c -o fitsutil.o fitsutil.c mv -f .deps/fitscat.Tpo .deps/fitscat.Po cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitswrite.o -MD -MP -MF .deps/fitswrite.Tpo -c -o fitswrite.o fitswrite.c mv -f .deps/fitscheck.Tpo .deps/fitscheck.Po fitstab.c:518:79: warning: for loop has empty body [-Wempty-body] for (nexttab=tab->nexttab,i=2;!nexttab->nseg;nexttab=nexttab->nexttab,i++); ^ fitstab.c:518:79: note: put the semicolon on a separate line to silence this warning mv -f .deps/fitsread.Tpo .deps/fitsread.Po mv -f .deps/fitshead.Tpo .deps/fitshead.Po mv -f .deps/fitsbody.Tpo .deps/fitsbody.Po mv -f .deps/fitswrite.Tpo .deps/fitswrite.Po 1 warning generated. 1 warning generated. mv -f .deps/fitstab.Tpo .deps/fitstab.Po mv -f .deps/fitsutil.Tpo .deps/fitsutil.Po mv -f .deps/fitskey.Tpo .deps/fitskey.Po rm -f libfits.a ar cru libfits.a fitsbody.o fitscat.o fitscheck.o fitscleanup.o fitsconv.o fitshead.o fitskey.o fitsmisc.o fitsread.o fitstab.o fitsutil.o fitswrite.o ranlib libfits.a Making all in levmar cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT Axb.o -MD -MP -MF .deps/Axb.Tpo -c -o Axb.o Axb.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT lmbc.o -MD -MP -MF .deps/lmbc.Tpo -c -o lmbc.o lmbc.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT lm.o -MD -MP -MF .deps/lm.Tpo -c -o lm.o lm.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT lmblec.o -MD -MP -MF .deps/lmblec.Tpo -c -o lmblec.o lmblec.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT lmlec.o -MD -MP -MF .deps/lmlec.Tpo -c -o lmlec.o lmlec.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT misc.o -MD -MP -MF .deps/misc.Tpo -c -o misc.o misc.c In file included from lmbc.c:77: ./lmbc_core.c:186:13: warning: 'finite' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] if (!LM_FINITE(fpls)) { ^ ./compiler.h:36:19: note: expanded from macro 'LM_FINITE' #define LM_FINITE finite // ICC, GCC ^ /usr/include/math.h:718:12: note: 'finite' declared here extern int finite(double) __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA, __IPHONE_NA); ^ In file included from lm.c:75: ./lm_core.c:173:7: warning: 'finite' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] if(!LM_FINITE(p_eL2)) stop=7; ^ ./compiler.h:36:19: note: expanded from macro 'LM_FINITE' #define LM_FINITE finite // ICC, GCC ^ /usr/include/math.h:718:12: note: 'finite' declared here extern int finite(double) __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA, __IPHONE_NA); ^ In file included from lm.c:75: ./lm_core.c:329:13: warning: 'finite' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] if(!LM_FINITE(pDp_eL2)){ /* sum of squares is not finite, most probably due to a user error. ^ ./compiler.h:36:19: note: expanded from macro 'LM_FINITE' #define LM_FINITE finite // ICC, GCC ^ /usr/include/math.h:718:12: note: 'finite' declared here extern int finite(double) __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA, __IPHONE_NA); ^ In file included from lmbc.c:77: ./lmbc_core.c:343:28: warning: explicitly assigning a variable of type 'double' to itself [-Wself-assign] mu=jacTe_inf=t=0.0; tmin=tmin; /* -Wall */ ~~~~^~~~~ ./lmbc_core.c:423:7: warning: 'finite' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] if(!LM_FINITE(p_eL2)) stop=7; ^ ./compiler.h:36:19: note: expanded from macro 'LM_FINITE' #define LM_FINITE finite // ICC, GCC ^ /usr/include/math.h:718:12: note: 'finite' declared here extern int finite(double) __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA, __IPHONE_NA); ^ In file included from lmbc.c:77: ./lmbc_core.c:590:13: warning: 'finite' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] if(!LM_FINITE(pDp_eL2)){ ^ ./compiler.h:36:19: note: expanded from macro 'LM_FINITE' #define LM_FINITE finite // ICC, GCC ^ /usr/include/math.h:718:12: note: 'finite' declared here extern int finite(double) __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA, __IPHONE_NA); ^ In file included from lmbc.c:77: ./lmbc_core.c:723:15: warning: 'finite' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] if(!LM_FINITE(pDp_eL2)){ ^ ./compiler.h:36:19: note: expanded from macro 'LM_FINITE' #define LM_FINITE finite // ICC, GCC ^ /usr/include/math.h:718:12: note: 'finite' declared here extern int finite(double) __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA, __IPHONE_NA); ^ In file included from lm.c:75: ./lm_core.c:535:7: warning: 'finite' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] if(!LM_FINITE(p_eL2)) stop=7; ^ ./compiler.h:36:19: note: expanded from macro 'LM_FINITE' #define LM_FINITE finite // ICC, GCC ^ /usr/include/math.h:718:12: note: 'finite' declared here extern int finite(double) __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA, __IPHONE_NA); ^ In file included from lm.c:75: ./lm_core.c:704:11: warning: 'finite' is deprecated: first deprecated in OS X 10.9 [-Wdeprecated-declarations] if(!LM_FINITE(pDp_eL2)){ /* sum of squares is not finite, most probably due to a user error. ^ ./compiler.h:36:19: note: expanded from macro 'LM_FINITE' #define LM_FINITE finite // ICC, GCC ^ /usr/include/math.h:718:12: note: 'finite' declared here extern int finite(double) __OSX_AVAILABLE_BUT_DEPRECATED(__MAC_10_0, __MAC_10_9, __IPHONE_NA, __IPHONE_NA); ^ In file included from misc.c:64: ./misc_core.c:789:12: warning: unused function 'SVDINV' [-Wunused-function] static int SVDINV(LM_REAL *a, LM_REAL *b, int m) ^ mv -f .deps/lmblec.Tpo .deps/lmblec.Po mv -f .deps/Axb.Tpo .deps/Axb.Po 1 warning generated. mv -f .deps/misc.Tpo .deps/misc.Po mv -f .deps/lmlec.Tpo .deps/lmlec.Po 4 warnings generated. mv -f .deps/lm.Tpo .deps/lm.Po 5 warnings generated. mv -f .deps/lmbc.Tpo .deps/lmbc.Po rm -f liblevmar.a ar cru liblevmar.a Axb.o lmbc.o lm.o lmblec.o lmlec.o misc.o ranlib liblevmar.a Making all in wcs cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT cel.o -MD -MP -MF .deps/cel.Tpo -c -o cel.o cel.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT lin.o -MD -MP -MF .deps/lin.Tpo -c -o lin.o lin.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT poly.o -MD -MP -MF .deps/poly.Tpo -c -o poly.o poly.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT proj.o -MD -MP -MF .deps/proj.Tpo -c -o proj.o proj.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT sph.o -MD -MP -MF .deps/sph.Tpo -c -o sph.o sph.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT tnx.o -MD -MP -MF .deps/tnx.Tpo -c -o tnx.o tnx.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT wcs.o -MD -MP -MF .deps/wcs.Tpo -c -o wcs.o wcs.c cc -DHAVE_CONFIG_H -I. -I../.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT wcstrig.o -MD -MP -MF .deps/wcstrig.Tpo -c -o wcstrig.o wcstrig.c mv -f .deps/wcstrig.Tpo .deps/wcstrig.Po mv -f .deps/sph.Tpo .deps/sph.Po mv -f .deps/cel.Tpo .deps/cel.Po mv -f .deps/tnx.Tpo .deps/tnx.Po mv -f .deps/lin.Tpo .deps/lin.Po mv -f .deps/wcs.Tpo .deps/wcs.Po mv -f .deps/poly.Tpo .deps/poly.Po mv -f .deps/proj.Tpo .deps/proj.Po rm -f libwcs_c.a ar cru libwcs_c.a cel.o lin.o poly.o proj.o sph.o tnx.o wcs.o wcstrig.o ranlib libwcs_c.a cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT analyse.o -MD -MP -MF .deps/analyse.Tpo -c -o analyse.o analyse.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT assoc.o -MD -MP -MF .deps/assoc.Tpo -c -o assoc.o assoc.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT astrom.o -MD -MP -MF .deps/astrom.Tpo -c -o astrom.o astrom.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT back.o -MD -MP -MF .deps/back.Tpo -c -o back.o back.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT bpro.o -MD -MP -MF .deps/bpro.Tpo -c -o bpro.o bpro.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT catout.o -MD -MP -MF .deps/catout.Tpo -c -o catout.o catout.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT check.o -MD -MP -MF .deps/check.Tpo -c -o check.o check.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT clean.o -MD -MP -MF .deps/clean.Tpo -c -o clean.o clean.c back.c:879:9: warning: variable 'bkg' is used uninitialized whenever 'if' condition is false [-Wsometimes-uninitialized] if (npix) ^~~~ back.c:910:10: note: uninitialized use occurs here return bkg; ^~~ back.c:879:5: note: remove the 'if' if its condition is always true if (npix) ^~~~~~~~~ back.c:810:14: note: initialize the variable 'bkg' to silence this warning float bkg, bqs,cste; ^ = 0.0 catout.c:860:24: warning: format string is not a string literal (potentially insecure) [-Wformat-security] fprintf(ascfile, skycattail); ^~~~~~~~~~ mv -f .deps/bpro.Tpo .deps/bpro.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT extract.o -MD -MP -MF .deps/extract.Tpo -c -o extract.o extract.c mv -f .deps/clean.Tpo .deps/clean.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fft.o -MD -MP -MF .deps/fft.Tpo -c -o fft.o fft.c mv -f .deps/check.Tpo .deps/check.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT field.o -MD -MP -MF .deps/field.Tpo -c -o field.o field.c mv -f .deps/assoc.Tpo .deps/assoc.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT filter.o -MD -MP -MF .deps/filter.Tpo -c -o filter.o filter.c mv -f .deps/fft.Tpo .deps/fft.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT fitswcs.o -MD -MP -MF .deps/fitswcs.Tpo -c -o fitswcs.o fitswcs.c mv -f .deps/astrom.Tpo .deps/astrom.Po mv -f .deps/extract.Tpo .deps/extract.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT flag.o -MD -MP -MF .deps/flag.Tpo -c -o flag.o flag.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT graph.o -MD -MP -MF .deps/graph.Tpo -c -o graph.o graph.c mv -f .deps/field.Tpo .deps/field.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT growth.o -MD -MP -MF .deps/growth.Tpo -c -o growth.o growth.c mv -f .deps/analyse.Tpo .deps/analyse.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT image.o -MD -MP -MF .deps/image.Tpo -c -o image.o image.c mv -f .deps/graph.Tpo .deps/graph.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT interpolate.o -MD -MP -MF .deps/interpolate.Tpo -c -o interpolate.o interpolate.c mv -f .deps/filter.Tpo .deps/filter.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT main.o -MD -MP -MF .deps/main.Tpo -c -o main.o main.c 1 warning generated. mv -f .deps/catout.Tpo .deps/catout.Po mv -f .deps/flag.Tpo .deps/flag.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT makeit.o -MD -MP -MF .deps/makeit.Tpo -c -o makeit.o makeit.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT manobjlist.o -MD -MP -MF .deps/manobjlist.Tpo -c -o manobjlist.o manobjlist.c mv -f .deps/growth.Tpo .deps/growth.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT misc.o -MD -MP -MF .deps/misc.Tpo -c -o misc.o misc.c mv -f .deps/interpolate.Tpo .deps/interpolate.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT neurro.o -MD -MP -MF .deps/neurro.Tpo -c -o neurro.o neurro.c mv -f .deps/manobjlist.Tpo .deps/manobjlist.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT pattern.o -MD -MP -MF .deps/pattern.Tpo -c -o pattern.o pattern.c mv -f .deps/main.Tpo .deps/main.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT pc.o -MD -MP -MF .deps/pc.Tpo -c -o pc.o pc.c mv -f .deps/misc.Tpo .deps/misc.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT photom.o -MD -MP -MF .deps/photom.Tpo -c -o photom.o photom.c 1 warning generated. mv -f .deps/back.Tpo .deps/back.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT plist.o -MD -MP -MF .deps/plist.Tpo -c -o plist.o plist.c mv -f .deps/neurro.Tpo .deps/neurro.Po mv -f .deps/image.Tpo .deps/image.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT prefs.o -MD -MP -MF .deps/prefs.Tpo -c -o prefs.o prefs.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT profit.o -MD -MP -MF .deps/profit.Tpo -c -o profit.o profit.c mv -f .deps/plist.Tpo .deps/plist.Po mv -f .deps/makeit.Tpo .deps/makeit.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT psf.o -MD -MP -MF .deps/psf.Tpo -c -o psf.o psf.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT readimage.o -MD -MP -MF .deps/readimage.Tpo -c -o readimage.o readimage.c profit.c:183:18: warning: unused variable 'oldniter' [-Wunused-variable] int i,j,p, oldniter, nparam, ncomp; ^ profit.c:181:14: warning: unused variable 'oldparaminit' [-Wunused-variable] double *oldparaminit, ^ profit.c:182:14: warning: unused variable 'oldchi2' [-Wunused-variable] psf_fwhm, oldchi2, a , cp,sp, emx2,emy2,emxy, dchi2; ^ profit.c:828:14: warning: unused variable 'x1' [-Wunused-variable] error, x1c,x1,x2,rmin; ^ mv -f .deps/pc.Tpo .deps/pc.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT refine.o -MD -MP -MF .deps/refine.Tpo -c -o refine.o refine.c mv -f .deps/readimage.Tpo .deps/readimage.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT retina.o -MD -MP -MF .deps/retina.Tpo -c -o retina.o retina.c pattern.c:181:2: warning: implicit declaration of function 'dpotrf' is invalid in C99 [-Wimplicit-function-declaration] dpotrf(uplo, N, A, LDA, &info); ^ pattern.c:231:13: warning: implicit declaration of function 'dpotrs' is invalid in C99 [-Wimplicit-function-declaration] if (!ierr) dpotrs(Order, Uplo, N, NRHS, A, lda, B, ldb); ^ pattern.c:814:41: warning: variable 'norm0' is uninitialized when used here [-Wuninitialized] *(normt++) = pnorm > 1.0/BIG? norm0/sqrt(pnorm) : 0.0; ^~~~~ pattern.c:504:26: note: initialize the variable 'norm0' to silence this warning cnorm,snorm,norm,norm0, dval, det, rad, dnrad, ^ = 0.0 mv -f .deps/photom.Tpo .deps/photom.Po mv -f .deps/fitswcs.Tpo .deps/fitswcs.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT scan.o -MD -MP -MF .deps/scan.Tpo -c -o scan.o scan.c cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT som.o -MD -MP -MF .deps/som.Tpo -c -o som.o som.c mv -f .deps/retina.Tpo .deps/retina.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT weight.o -MD -MP -MF .deps/weight.Tpo -c -o weight.o weight.c mv -f .deps/prefs.Tpo .deps/prefs.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT winpos.o -MD -MP -MF .deps/winpos.Tpo -c -o winpos.o winpos.c mv -f .deps/refine.Tpo .deps/refine.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT xml.o -MD -MP -MF .deps/xml.Tpo -c -o xml.o xml.c mv -f .deps/weight.Tpo .deps/weight.Po cc -DHAVE_CONFIG_H -I. -I.. -I/sw/include -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -MT ldactoasc.o -MD -MP -MF .deps/ldactoasc.Tpo -c -o ldactoasc.o ldactoasc.c mv -f .deps/ldactoasc.Tpo .deps/ldactoasc.Po /bin/sh ../libtool --tag=CC --mode=link cc -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -static -shared-libgcc -o ldactoasc ldactoasc.o ../src/fits/libfits.a -framework vecLib -L/sw/lib -lfftw3_threads -lfftw3 -lm mv -f .deps/winpos.Tpo .deps/winpos.Po 3 warnings generated. mv -f .deps/pattern.Tpo .deps/pattern.Po mv -f .deps/som.Tpo .deps/som.Po mv -f .deps/xml.Tpo .deps/xml.Po mv -f .deps/scan.Tpo .deps/scan.Po libtool: link: cc -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -shared-libgcc -o ldactoasc ldactoasc.o ../src/fits/libfits.a -framework vecLib -L/sw/lib /sw/lib/libfftw3_threads.dylib /sw/lib/libfftw3.dylib -lm 4 warnings generated. mv -f .deps/profit.Tpo .deps/profit.Po mv -f .deps/psf.Tpo .deps/psf.Po /bin/sh ../libtool --tag=CC --mode=link cc -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -static -shared-libgcc -o sex analyse.o assoc.o astrom.o back.o bpro.o catout.o check.o clean.o extract.o fft.o field.o filter.o fitswcs.o flag.o graph.o growth.o image.o interpolate.o main.o makeit.o manobjlist.o misc.o neurro.o pattern.o pc.o photom.o plist.o prefs.o profit.o psf.o readimage.o refine.o retina.o scan.o som.o weight.o winpos.o xml.o ../src/fits/libfits.a ../src/wcs/libwcs_c.a ../src/levmar/liblevmar.a -framework vecLib -L/sw/lib -lfftw3_threads -lfftw3 -lm libtool: link: cc -O3 -g -funroll-loops -fomit-frame-pointer -Wall -D_REENTRANT -shared-libgcc -o sex analyse.o assoc.o astrom.o back.o bpro.o catout.o check.o clean.o extract.o fft.o field.o filter.o fitswcs.o flag.o graph.o growth.o image.o interpolate.o main.o makeit.o manobjlist.o misc.o neurro.o pattern.o pc.o photom.o plist.o prefs.o profit.o psf.o readimage.o refine.o retina.o scan.o som.o weight.o winpos.o xml.o ../src/fits/libfits.a ../src/wcs/libwcs_c.a ../src/levmar/liblevmar.a -framework vecLib -L/sw/lib /sw/lib/libfftw3_threads.dylib /sw/lib/libfftw3.dylib -lm Making all in tests make[2]: Nothing to be done for `all'. make[2]: Nothing to be done for `all-am'. fink-package-precedence . Scanning /\.Plo,\.Po$/ dependency files... ./src/.deps/analyse.Po ./src/.deps/assoc.Po ./src/.deps/astrom.Po ./src/.deps/back.Po ./src/.deps/bpro.Po ./src/.deps/catout.Po ./src/.deps/check.Po ./src/.deps/clean.Po ./src/.deps/extract.Po ./src/.deps/fft.Po ./src/.deps/field.Po ./src/.deps/filter.Po ./src/.deps/fitswcs.Po ./src/.deps/flag.Po ./src/.deps/graph.Po ./src/.deps/growth.Po ./src/.deps/image.Po ./src/.deps/interpolate.Po ./src/.deps/ldactoasc.Po ./src/.deps/main.Po ./src/.deps/makeit.Po ./src/.deps/manobjlist.Po ./src/.deps/misc.Po ./src/.deps/neurro.Po ./src/.deps/pattern.Po ./src/.deps/pc.Po ./src/.deps/photom.Po ./src/.deps/plist.Po ./src/.deps/prefs.Po ./src/.deps/profit.Po ./src/.deps/psf.Po ./src/.deps/readimage.Po ./src/.deps/refine.Po ./src/.deps/retina.Po ./src/.deps/scan.Po ./src/.deps/som.Po ./src/.deps/weight.Po ./src/.deps/winpos.Po ./src/.deps/xml.Po ./src/fits/.deps/fitsbody.Po ./src/fits/.deps/fitscat.Po ./src/fits/.deps/fitscheck.Po ./src/fits/.deps/fitscleanup.Po ./src/fits/.deps/fitsconv.Po ./src/fits/.deps/fitshead.Po ./src/fits/.deps/fitskey.Po ./src/fits/.deps/fitsmisc.Po ./src/fits/.deps/fitsread.Po ./src/fits/.deps/fitstab.Po ./src/fits/.deps/fitsutil.Po ./src/fits/.deps/fitswrite.Po ./src/levmar/.deps/Axb.Po ./src/levmar/.deps/Axb_core.Po ./src/levmar/.deps/lm.Po ./src/levmar/.deps/lm_core.Po ./src/levmar/.deps/lmbc.Po ./src/levmar/.deps/lmbc_core.Po ./src/levmar/.deps/lmblec.Po ./src/levmar/.deps/lmblec_core.Po ./src/levmar/.deps/lmdemo.Po ./src/levmar/.deps/lmlec.Po ./src/levmar/.deps/lmlec_core.Po ./src/levmar/.deps/misc.Po ./src/levmar/.deps/misc_core.Po ./src/wcs/.deps/cel.Po ./src/wcs/.deps/lin.Po ./src/wcs/.deps/poly.Po ./src/wcs/.deps/proj.Po ./src/wcs/.deps/sph.Po ./src/wcs/.deps/tnx.Po ./src/wcs/.deps/wcs.Po ./src/wcs/.deps/wcstrig.Po Looking for incorrect headers in 72 dependency files... Determining fink providers of 1 headers... 1 - 1 Found use of headers from 1 fink packages: fftw3 Scanning binaries for incorrect dyld linking... /bin/rm -rf /sw/build.build/root-sextractor-2.8.6-4 /bin/mkdir -p /sw/build.build/root-sextractor-2.8.6-4/sw /bin/mkdir -p /sw/build.build/root-sextractor-2.8.6-4/DEBIAN /usr/sbin/chown -R fink-bld:fink-bld /sw/build.build/root-sextractor-2.8.6-4 sudo -u fink-bld [ENV] sh -c /tmp/fink.ybcd_ /tmp/fink.BgEdK #!/bin/sh -ev make install DESTDIR=/sw/build.build/root-sextractor-2.8.6-4 Making install in man make[2]: Nothing to be done for `install-exec-am'. ../autoconf/install-sh -c -d '/sw/build.build/root-sextractor-2.8.6-4/sw/share/man/man1' /usr/bin/install -c -m 644 sex.1 '/sw/build.build/root-sextractor-2.8.6-4/sw/share/man/man1' ../autoconf/install-sh -c -d '/sw/build.build/root-sextractor-2.8.6-4/sw/share/man/manx' /usr/bin/install -c -m 644 sex.x '/sw/build.build/root-sextractor-2.8.6-4/sw/share/man/manx' Making install in src Making install in fits make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in levmar make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. Making install in wcs make[3]: Nothing to be done for `install-exec-am'. make[3]: Nothing to be done for `install-data-am'. ../autoconf/install-sh -c -d '/sw/build.build/root-sextractor-2.8.6-4/sw/bin' /bin/sh ../libtool --mode=install /usr/bin/install -c sex ldactoasc '/sw/build.build/root-sextractor-2.8.6-4/sw/bin' libtool: install: /usr/bin/install -c sex /sw/build.build/root-sextractor-2.8.6-4/sw/bin/sex libtool: install: /usr/bin/install -c ldactoasc /sw/build.build/root-sextractor-2.8.6-4/sw/bin/ldactoasc make[3]: Nothing to be done for `install-data-am'. Making install in tests make[2]: Nothing to be done for `install-exec-am'. make[2]: Nothing to be done for `install-data-am'. make[2]: Nothing to be done for `install-exec-am'. autoconf/install-sh -c -d '/sw/build.build/root-sextractor-2.8.6-4/sw/share/sextractor' /usr/bin/install -c -m 644 xsl/sextractor.xsl '/sw/build.build/root-sextractor-2.8.6-4/sw/share/sextractor' mkdir -p /sw/build.build/root-sextractor-2.8.6-4/sw/share/sextractor cp -p config/* /sw/build.build/root-sextractor-2.8.6-4/sw/share/sextractor sudo -u fink-bld [ENV] sh -c /tmp/fink.QJ6kn /usr/bin/install -d -m 700 /sw/build.build/root-sextractor-2.8.6-4/sw/share/doc/sextractor /bin/cp -r AUTHORS /sw/build.build/root-sextractor-2.8.6-4/sw/share/doc/sextractor/ /bin/cp -r BUGS /sw/build.build/root-sextractor-2.8.6-4/sw/share/doc/sextractor/ /bin/cp -r COPYRIGHT /sw/build.build/root-sextractor-2.8.6-4/sw/share/doc/sextractor/ /bin/cp -r ChangeLog /sw/build.build/root-sextractor-2.8.6-4/sw/share/doc/sextractor/ /bin/cp -r HISTORY /sw/build.build/root-sextractor-2.8.6-4/sw/share/doc/sextractor/ /bin/cp -r README /sw/build.build/root-sextractor-2.8.6-4/sw/share/doc/sextractor/ /bin/cp -r THANKS /sw/build.build/root-sextractor-2.8.6-4/sw/share/doc/sextractor/ /bin/chmod -R go=u-w /sw/build.build/root-sextractor-2.8.6-4/sw/share/doc/sextractor /bin/rm -f /sw/build.build/root-sextractor-2.8.6-4/sw/info/dir /sw/build.build/root-sextractor-2.8.6-4/sw/info/dir.old /sw/build.build/root-sextractor-2.8.6-4/sw/share/info/dir /sw/build.build/root-sextractor-2.8.6-4/sw/share/info/dir.old Reverting ownership of install dir to root Writing control file... Writing md5sums file... env LANG=C LC_ALL=C dpkg-deb -b root-sextractor-2.8.6-4 /sw/fink/10.9/stable/main/binary-darwin-x86_64/sci dpkg-deb: building package `sextractor' in `/sw/fink/10.9/stable/main/binary-darwin-x86_64/sci/sextractor_2.8.6-4_darwin-x86_64.deb'. Removing runtime build-lock... Removing build-lock package... /sw/bin/dpkg-lockwait -r fink-buildlock-sextractor-2.8.6-4 (Reading database ... 5114 files and directories currently installed.) Removing fink-buildlock-sextractor-2.8.6-4 ...